Branchiostoma floridae (Florida lancelet): 118426274
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Entry
118426274 CDS
T01074
Name
(RefSeq) F-box/WD repeat-containing protein 8-like isoform X1
KO
K10264
F-box and WD-40 domain protein 8
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118426274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfo04121
]
118426274
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
118426274
Cul7 complex
Target recognizing subunit
118426274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
WD40_CDC20-Fz
WD40
Beta-prop_TEP1_2nd
F-box
WD40_WDHD1_1st
WD40_Prp19
WDR55
Beta-prop_SCAP
Beta-prop_EML_2
EIF3I
Beta-prop_EML
Beta-prop_EIPR1
WD40_CFAP43
Motif
Other DBs
NCBI-GeneID:
118426274
NCBI-ProteinID:
XP_035691460
UniProt:
A0A9J7N698
LinkDB
All DBs
Position
11:21006269..21054676
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AA seq
647 aa
AA seq
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MARPEELKEFVEQWKQEIHSSNHKEAAGPSGQGQNIRVQRTQGFSSVGSRWEGGAGSSKQ
QQQQQESLTEKSPPDRLSRPPSCNQDASNQHYPPFALADQLLQGETAESLLSGRHVVKRL
RTDACAGPVSPGEAPEPRGNQHSLLEQLISDLDEINEIPFFEVSLPRELALQIFQHLSME
DLCRCAQVSSSWRSLADDEVLWQKVGRSLGCDLSAGGQKCKEVVKTHIETDRRVTSNWKS
RVGQIDYLECAIGGFLSAVSSCGTHIVAGFSEGIVRLWDVLADENTPSVLLESTQEQAVC
NVSVNPTVTVASFGNGDVSIWSTEHGGTPLHHFTLDQGGPPQICTCPGGAVVACARGSVV
RVDSPDAVGVWHCRQNFSCDKKVSHLTLVQKGGPPNKALSDHLVVMATDYDVYAYRPHRL
PEERHRFHSLYGAVVASLDATSERAAVASTCFGVSLEDVFKVQCYCLDTGKQLTSLRGHR
GQVTCMDLRNSPPNMLVTGAEDKRVRVFDLRTPRPVLNQYSHPLGVSCVQMDDWKVVSGG
REGALCVWDLRMQNKLWEMKPSKVHPIQYCRFGGPHLIAACYPTPSCSREDLMDQYRHQP
DVKGRINVYDFSVDQTTQDVPDICKADYDEPEGYNYNISLAMPYDAV
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcctgaagaactaaaagagtttgtggaacaatggaaacaagagatacacagc
tccaaccacaaggaagcagcagggccaagcggtcaaggtcaaaatattcgtgtgcaaaga
actcagggtttcagctctgtcggttcgaggtgggaggggggcgccggctcatccaaacaa
caacaacaacaacaagaaagtttgactgaaaagtcgcctccggatcgactgtcgcggccg
ccttcgtgcaatcaggacgcttcaaaccagcattaccctccgttcgcccttgccgaccag
ttgttacagggcgagacagcggagagtctgttgtcagggcggcatgttgtgaagaggctc
cggacagacgcctgtgccgggccggtgtcgccaggagaggcgcccgaacctcgggggaac
cagcactccttactggagcaattgatctccgatctggatgaaatcaacgagatcccgttc
ttcgaggtcagtcttcccagggagctcgctctgcagatcttccaacacctcagcatggag
gacttatgcaggtgtgcacaggtgagttccagttggagaagtctggccgatgatgaggtt
ttgtggcagaaggtggggaggagtctcgggtgtgacctcagtgcaggaggtcaaaagtgt
aaggaggtcgtcaaaacgcacatcgagacagacaggagggtcacaagcaactggaagagc
cgtgtgggacagattgactacctggagtgcgccatcggagggttcctgtctgctgtcagc
tcctgtgggacccacatcgtggcggggttctcagaaggaatagtccggctgtgggacgtc
ctcgcagatgagaacacgcccagcgtgctgttagagtctacccaggagcaggctgtttgt
aacgtctctgtcaaccccaccgtcaccgtcgcctctttcgggaacggtgatgtgagcatc
tggagtactgaacatggaggcacccccctgcaccacttcaccctggaccaggggggcccc
cctcagatctgcacctgtccagggggggccgtggtggcctgtgctcgaggctcggtggtc
agggtggactctccggacgctgtgggggtctggcactgtcgacagaacttcagctgtgat
aaaaaggtgtcacacctgactctagtacagaagggcgggcctccaaataaggcgctgtcc
gaccacctggttgtcatggcgacagactacgacgtgtacgcgtaccgcccccaccgcctg
ccggaggagcgacacaggtttcactctctgtacggcgccgtggtggcgagtctggacgcc
acgtcggaacgggcagccgtcgcttccacctgcttcggcgtctccctggaggacgtcttc
aaggtgcagtgctactgcctggacacggggaaacagctgaccagcctgcggggtcaccga
ggtcaggtcacctgcatggacctgcggaacagtccacccaacatgctggtcacgggggcc
gaggataaaagggttcgagtgtttgacctgcggacgccccggccggtgctgaaccagtac
tcccacccactgggcgtgtcgtgtgtgcagatggacgactggaaggtggttagcggagga
cgggagggcgcgctgtgtgtctgggacctgcgcatgcagaacaagctctgggagatgaag
cccagtaaagtccacccgatccagtactgccggttcggaggcccccacctcattgccgcg
tgttacccgacaccctcctgcagtagggaggacctgatggaccagtacaggcaccagcca
gatgtcaaaggtcggatcaacgtgtacgatttctcggtggaccagacgactcaagacgtc
cccgacatctgcaaagccgactacgacgaacccgaggggtacaactacaacatcagcctc
gccatgccgtatgacgcagtctga
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