KEGG   Branchiostoma floridae (Florida lancelet): 118426364
Entry
118426364         CDS       T01074                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9-like
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
bfo  Branchiostoma floridae (Florida lancelet)
Pathway
bfo03020  RNA polymerase
bfo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bfo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    118426364
  09124 Replication and repair
   03420 Nucleotide excision repair
    118426364
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bfo03021]
    118426364
   03400 DNA repair and recombination proteins [BR:bfo03400]
    118426364
Transcription machinery [BR:bfo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     118426364
DNA repair and recombination proteins [BR:bfo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      118426364
SSDB
Motif
Pfam: Zn_ribbon_TFIIS Zn_ribbon_RPB9 Ogr_Delta Zn_ribbon_recom Zn_Ribbon_TF DUF5886 Zn_ribbon_NrdR Zn_ribbon_IS1595 Zn_ribbon_GRF_2 HVO_0758 SR1P Zn_Ribbon_1 CpXC DZR Zn_ribbon_3
Other DBs
NCBI-GeneID: 118426364
NCBI-ProteinID: XP_035691595
UniProt: C3XRA2
LinkDB
Position
1:complement(18446766..18451312)
AA seq 125 aa
MDYGHDEGPGFVGIRFCQECNNMLYPKEDKENKILLYACRNCDYQQVADNSCIYVNKIMH
EVDELTQIVADVAQDPTLPRTEDHQCPKCGHREAVFFQSQTTKAEDAMRLYYVCTAPNCG
HRWTE
NT seq 378 nt   +upstreamnt  +downstreamnt
atggactacggacacgacgaagggcctggattcgtaggaatcagattctgccaagaatgc
aacaacatgctgtatcctaaagaggacaaggagaacaagatattactttatgcatgcaga
aattgtgactaccaacaggttgcagacaacagttgtatctatgtcaacaagatcatgcat
gaagtagacgagctgactcagattgtagcagatgttgctcaagaccctaccttacctcgc
acagaagatcatcagtgtccaaagtgtggtcacagagaagcagttttcttccagtcacaa
actacaaaagcagaggatgccatgagactctactatgtatgtacagctccaaactgtgga
cacaggtggactgagtaa

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