Branchiostoma floridae (Florida lancelet): 118426461
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Entry
118426461 CDS
T01074
Name
(RefSeq) transcription elongation factor SPT6-like isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfo03021
]
118426461
03036 Chromosome and associated proteins [BR:
bfo03036
]
118426461
Transcription machinery [BR:
bfo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
118426461
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
118426461
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
S1
HHH_3
Spt6_S1
SPT6_acidic
SH2
HHH_9
S1_RRP5
Tex_N
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
118426461
NCBI-ProteinID:
XP_035691768
UniProt:
A0A9J7M0C9
LinkDB
All DBs
Position
11
Genome browser
AA seq
1832 aa
AA seq
DB search
MSDFLESEAEESMGEESGDDEEVTTKKSRAVMGSGDEEEDEEGKVEDIEDNVSDLINDDD
DEEEMEGEEEPGPRSRSRSRSRSRSGSEASAGEDSEGEIGGKKRRRRSSIDDRLEDEDYD
LIEENLGVKVKRKRFRRVQALSDDEESDREVQEEEAQEEDREAIEKELFEGAEEGSEGEG
SVKDRPLPPHEETPFQEEESGSEDEIDDFIVDDDNQPIRKPKGKRKFTDAALQEAQDIFG
VEFDFEEFEQFGDEYEGEEEELYDEYEEEGEEGVKRVKKPGKKKLAKRSIFDVYEPSELE
QKHFTDQDNEIRTADLPERFQLRTIPVRPAEETELMEEAEWIYKYAFMTLPISMQEFPDK
PEEGGGYGSMYSRKEPSTVGKIRDALNFIRNQHFEVPFIAFYRKEYVEPELNINDLWRIW
QWDEKWTQLRNRKRNMTRLFEKMQTFQYEQVAANDPDAPLPENMRPLTQTDLDKLNEVQT
MEELRDAYMHFLLYYGRDIPRMQNAAKKKKKKKKRKPKKERAEGEEGEDVEVEERDGEEE
EEEEEEEEEEEEADTAQLKQASRRDMYSICETAGLGGLAKKFGLTPEQFGENLRDNYQRH
ETDQYPAEPNDLSKEFVNSQFPSEEKVLQGARHMVAMQLSREPLVRQCVRQTYFERAKVS
TKPTKKGRKEIDEMHYGYTFKYLKNKPVKDLTGDQFLKMSIAEDEGLLKTHVSIDGETTQ
SYFEEIKQLYYRDEFSHLVQEWNTQRTMVLERMLKFILYPQMEKELRSKLVQESKDGIIK
SCCRKLYNWLKVAPYQPEQQIEEEDEYIEGMGSSKGLRVMGLAYSSDWDTASFAAVIDGE
GDVVDFLRLAHLMKRRNAYREADRENKLSDMESIKNLILNKKPHVIVIGAENRDAQSVID
DVKLCVKELEEEEQLAPIAVELLDNELSRFIMNSPRAEAEHRDYPPLLRQALSLARRMQD
PLIEFSQLCVNNDDLLCLRFHTLQEQVSREDLLHALELEFINRVNEVGVDINRCVANNHT
TTLAQFVCGLGPRKAAYILKVLKQNNARLENRNQLVMMCHMGPKVFMNCAGFIKIDTKSL
GDSEQYIELLDGSRVHPETYDWARKMAVDALEYDESAEDANPAAALEEILETPERLKDLD
LDAFAEELERQGFGNKSITLYDIRAELNSMYKDLRTPFRSPTVEEKFNMLTKETPETFYI
GKLVQCRVTGIAHRRPQGDQLDQANPVRSEETGLWRCPFCQKDTFPELSEVWNHFDSSEC
PGQATGAVTRLDNGVSGFIPTKMISDKHVKSPEERVKPGMEVYTRIIKIDIERFRVDLSC
RSSDLADTNGDYRPARDLYYDHETEETDRKADDEAKKKQARTTYVKRVIVHPCFHNISYK
QAVKLMESQDQGDVIVRPSSKGPDHLTVTWKVDDGIYQHIDVREEGKENAFSLGQSLWIN
NEEFEDLDEIIARHIQPMASFVRDLTNHKYYQAAEGGKREAIEKIIRDEKKKAPSKIPYI
ISASKEYPGKFLLSYQPKTSPRHEFVTVTPDGFRFRQLIHHSVNALFRWFKEHFRDPIPG
ATPVNVRHRTPMAPSRPENTPAPSGINLQGVDPAQLSQLQKAISNFPSNLSTQQVFSALA
AATGQGSSATPAQWGSQGYGQSQGQYHAGAGYSGAAGSSSYQTFATPNPMATPMMTPAYP
SATPAQGQPQTTPRYQPTPQSSWGHGHGRAAASASTSGATPSRAAPTPRASTSAASAGTD
WGKAALAWVQQQRNKQRGGDTPKVRTPGHHTPGHHTPSHHTPSHRTPSHRTPTHRAPTMS
PSPMVEGTPMIESTPISAMGDATPLIDEPQET
NT seq
5499 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactttctggagagcgaggctgaggagtcgatgggggaggagtctggagacgat
gaggaggtcactacgaagaagagtagggcggtgatgggaagtggtgatgaggaggaggat
gaggaaggaaaggttgaggatattgaagacaacgtgtcggacctgattaacgatgatgat
gatgaagaagagatggagggagaggaggagcctgggcctcggtcccggtcgcggtcccga
tctcgctcaagatccggtagtgaggcgtctgcaggggaagactctgagggagagattggt
gggaagaagaggagaagaagatcaagcattgatgaccgactggaagatgaggactatgat
ctcatcgaagaaaatctgggtgtcaaagtcaaaaggaaacgatttcgacgtgtgcaagcc
ctgtcagatgatgaagagagcgaccgagaggtacaggaggaagaggcacaggaagaggac
agggaggccatcgagaaagagctgtttgaaggagctgaggagggctctgaaggggagggg
agtgtgaaggatcgccccctaccccctcatgaggaaactccattccaggaggaggagtca
gggtcagaggatgaaattgatgacttcattgtggatgatgacaaccaacccatcagaaaa
cccaagggcaaacgcaagttcactgatgcggcccttcaggaggctcaggatatctttgga
gttgagtttgactttgaagagtttgagcagtttggagacgagtatgagggagaggaggag
gagttgtatgatgagtatgaagaagaaggagaggagggggtgaaaagagtgaagaaacct
ggcaagaagaagcttgccaagaggagcatctttgatgtctatgagcctagcgagttggaa
cagaagcacttcactgatcaggacaatgagatccgtacagcggacctgccggagaggttc
cagttgcgtacgatcccggtccgacctgctgaggagacagagctgatggaggaggcagag
tggatctacaagtatgccttcatgaccctccccatctccatgcaggagtttccagataag
ccagaggagggaggtggttatggttccatgtacagcaggaaagaacccagtactgtgggc
aagatcagggatgcactcaacttcataagaaaccagcattttgaggtgccattcatagcg
ttctacaggaaggagtatgtggagccagaactgaacatcaacgatctgtggaggatttgg
cagtgggacgaaaagtggacacagctgcggaacaggaagcggaacatgacgcgtctgttt
gagaagatgcagacgttccagtacgaacaggtggcagcaaacgacccggacgcaccactg
cctgagaacatgcgtccgctcacacagacagacctggacaaactgaatgaagtccagacc
atggaagaactgagggacgcctatatgcactttctgctgtactatgggcgggacatcccc
agaatgcagaatgctgccaagaagaagaagaaaaagaagaagaggaagccaaagaaggag
cgagctgaaggggaggagggggaggatgtagaagtggaggagagagatggggaggaggag
gaggaagaagaagaggaggaagaggaagaggaggaagcagatacagcacagttgaaacaa
gcttctagaagagacatgtactccatctgtgaaacagcaggactaggtggccttgctaag
aagtttggcctgactccggagcagtttggggagaatttgcgggataactaccagcgtcac
gagacagaccagtacccagctgagcccaacgatctctccaaggagttcgtcaacagtcaa
ttcccatctgaggagaaagtccttcaaggggcgcggcacatggttgccatgcagttgtca
cgggaacctcttgtccgacagtgtgtccgacagacgtacttcgagagggccaaagtctcc
accaagcccaccaagaaaggacgcaaggaaattgatgagatgcactacggttacaccttc
aagtacctgaagaacaagccagtcaaggacctgacaggagaccagtttctcaagatgtcg
attgcagaagacgaaggcctcctgaagacacacgtctccatagatggagagaccacccag
tcgtactttgaggagatcaagcagctgtactaccgcgatgagttcagccacctcgtgcag
gagtggaacacccagcgcaccatggtgctggagcgcatgctcaagttcatcctctatcca
cagatggagaaggaactcaggtccaaactggtacaggagtcgaaggacggtatcattaag
tcatgctgccgtaagctgtacaactggctgaaggttgctccctaccagcctgagcagcag
atagaggaggaagatgagtacatcgagggcatgggctcctccaaggggctccgagtcatg
gggctggcatactcctcagactgggacacagcatcctttgctgcagtgatagatggtgag
ggggacgtggtggatttcctcagacttgctcatctgatgaagcggagaaacgcctacaga
gaagcggacagagaaaataagttgagtgacatggaaagcatcaagaatcttattctgaac
aagaagccacatgtgattgtaattggagctgagaacagggatgcccagtcagtgattgac
gatgtgaagctgtgtgtgaaggagctggaggaggaggagcagctggctcccatcgctgtg
gagctgctcgacaacgagctcagccgcttcatcatgaactctcctcgtgctgaggcggag
catcgtgactacccaccattgctgcgtcaggccctgtcactggcacggcgtatgcaggac
ccactcatcgagttctcccagctctgcgtcaacaatgatgacctgctctgtctccgcttt
cacacgctccaggagcaagtgagtcgagaggatcttctccatgccctggagttggagttc
atcaaccgtgtgaacgaggttggggtggacattaaccgctgcgtggccaacaaccacacc
accactctggcacagtttgtgtgtggtctggggcccaggaaagctgcatacatcctgaag
gtgttgaaacagaacaatgccaggttggagaacaggaaccagttggtgatgatgtgccac
atgggtcccaaggtcttcatgaactgtgcaggcttcatcaagattgacaccaaatcactg
ggagacagtgagcagtacatcgagctgctggatggttcccgggtgcacccggagacgtac
gactgggcgcggaagatggcggtggacgcactggagtacgacgagtctgcggaggacgcc
aacccggccgctgcgctggaggaaatcctggagactccggagaggctgaaggatctggac
ttggacgccttcgcagaggaactggaacgtcagggttttgggaacaagagcatcacgctg
tacgacatccgtgcagagctgaactccatgtacaaggacctccgcacacccttcagatca
cccactgtggaggagaagttcaacatgctgaccaaggagactccagagacattctacata
ggtaagcttgtgcaatgtcgagtgaccggtattgcccaccggagaccccagggtgaccag
ctggaccaggccaaccctgtccgttccgaggagaccggcctgtggcgctgccccttctgc
cagaaggacacctttcccgagctcagcgaggtgtggaaccattttgacagctcagagtgt
cctggccaggccacaggcgcagtgaccagactggacaatggggtatcaggtttcatcccc
accaagatgatcagtgataaacatgtgaagagcccagaggagagagtgaagcctggtatg
gaggtctacactcgcatcatcaaaatcgacattgagcgtttccgcgtggacctatcctgc
cggtcgtcggacctcgctgatacgaacggagactaccgccctgccagggacctgtactac
gaccacgaaactgaggagacggacaggaaggcagatgacgaggccaagaaaaaacaggcc
agaacaacgtacgtgaagcgtgtgatcgtgcacccctgcttccacaacatcagctacaag
caggcggttaaactgatggagagccaggaccagggggatgtcatcgtcaggcccagcagc
aaggggcctgaccatttgacagtgacctggaaggttgatgacggaatctaccagcacatc
gatgtacgtgaggaggggaaggaaaacgccttcagtctgggacagtctctctggattaac
aatgaggaatttgaagatttggatgaaatcattgcgcgccacatccagccaatggcgtcc
tttgtacgagacctgaccaaccacaagtactaccaggcagcggaaggcggaaagagggag
gctatagagaaaatcatccgggatgagaagaaaaaagccccctccaaaattccctacatc
atcagtgcttctaaggagtacccagggaaattcctgctgtcctatcagcccaagacatct
ccgcggcacgagtttgtgaccgtgacaccagacggcttcaggttccgccagctcatccac
cactcggtgaacgcgctcttcagatggttcaaggaacatttcagagaccctatcccaggt
gccacacctgtgaatgtacgccacaggacacccatggcgccctcacgtccagaaaacaca
cctgcaccttcggggatcaacctgcaaggtgtggatcccgcacagctgtcgcagctgcag
aaggccatcagcaacttcccctccaacctgtccacccagcaggtcttcagcgccctggcc
gcagccacgggtcaggggtcaagcgccacgcctgcgcagtggggcagccaggggtacggc
cagagccagggacagtaccatgcaggggcagggtacagcggggcggcagggtccagttct
tatcagacctttgccactcccaaccccatggcgacgccgatgatgaccccagcctacccc
tctgccacgccggcgcaaggtcagccccagaccacgcctcggtaccagccgacaccgcag
tcctcctggggccacgggcacggccgggccgccgcgtctgcctcaacgtcaggggccact
ccgtcacgagctgctccaactccaagggcctccacatctgctgcgtctgcggggaccgac
tgggggaaggcagccctggcgtgggtccagcagcagcggaacaagcagcgaggcggcgac
acgcctaaggtccgcacgcccggtcaccacactcctggtcaccacacgcccagtcaccac
actcccagtcaccgaacccccagccatcgcacaccgacgcatcgcgccccgaccatgtct
cccagccccatggtggagggcacgcccatgatcgagagcacccctatctctgcaatggga
gatgccacgcctctgatagacgaaccacaagaaacgtag
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integrated database retrieval system
