Branchiostoma floridae (Florida lancelet): 118426910
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Entry
118426910 CDS
T01074
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118426910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfo03021
]
118426910
03036 Chromosome and associated proteins [BR:
bfo03036
]
118426910
Transcription machinery [BR:
bfo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118426910
Coactivators
SAGA/TFTC/STAGA complex
118426910
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
118426910
STAGA complex
118426910
TFTC complex
118426910
SAGA complex
118426910
SLIK complex
118426910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
Motif
Other DBs
NCBI-GeneID:
118426910
NCBI-ProteinID:
XP_035692410
UniProt:
A0A9J7M3F6
LinkDB
All DBs
Position
12:9670267..9679292
Genome browser
AA seq
683 aa
AA seq
DB search
MSDRVMPDVTAESIKVIAESVGIGQLPDEAASALAEDATYRLKQITQEAVKFMHHGKRRK
LSTADFDNALKLKNVEPLYGFHAEEHIPFRFASGGGRELHFYEEKEVELGDIINAPLPRI
PLDVNLKAHWLAIEGVQPSIPENPPPVPKEDQHAADRPPGVTAKPSGKDGTKPAGKPGKA
EVKGLPSEVAGVKLKPVLTHELSVEQQLYYREITEACVGSCESRRAEALQSLATDPGLHQ
MIPRFSTFVCEGVRVNVVQSNLALLIYLMRMVKALMDNTTLHLEKYLHEVIPAVATCILS
KQLCQRPDVDNHWALRDFAARLMGNMCRNFSSNINNIQSRMTKTYTKILHDEQSHLATRY
GALAGLAEMGHDVVKSLLIPKLKEEGEKVKTLMEGPVHNSVDKTAAEHIRALLLKHCAPV
LAKIRPGPDNQEQYKTDFGYLGPLLCAHVVKARQQQQQQQLQATTTTAAAASVVQRPTLQ
IPQKSEWGRASAVLSAMAAPRTPTPQATTPSLLTISRPSTPANPPSTPTTPTPGTPNPQT
KYIIVSTTKASTSTTLPSTSTISSSGLASSSSSAASTIVKFVSAAQGSASGGSEPRVLAQ
LPSGQKYVVVSVPSSGQTTTTSQGKTQAVVVVKSEGQGSQGQGSIVGVTSAAGTLAQLAT
SSSQDGTKVSSVSQSGATSKPNS
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacagggtgatgcccgacgtgactgcagagtccatcaaggtgatcgcggagtcg
gtggggattggccagctccctgacgaggcggcctcggcgctggcagaagacgcgacctac
cggttaaaacagataacacaggaggcagttaagtttatgcatcatgggaagaggagaaaa
ctctcaacagctgactttgacaacgctctcaagctgaaaaatgtggagcccctgtatggg
ttccatgcggaagagcacatcccgttccggtttgcgagtggcggtgggcgggagctgcac
ttctatgaggaaaaagaggtggagcttggtgacatcatcaacgctcctcttcccaggatt
cccctggatgtcaacttaaaagcccactggttggccattgaaggagttcagccgtccatt
cctgagaacccacctccagtccccaaggaggaccagcatgcagctgataggccacctggg
gtcacagcaaagccctctgggaaggatgggaccaaaccagctgggaagcctggcaaagct
gaggtcaaaggtcttccatcagaggtcgcaggggtcaagttgaagccagtgctgacccat
gaactatcagttgagcagcagctatactacagggaaatcactgaggcctgtgttgggtcc
tgtgagtctagaagagcggaggcgcttcagagcttggccactgatcctggtcttcatcag
atgattcccaggttcagcacatttgtctgtgaaggggtgcgtgtgaatgttgtgcagagt
aacctcgccctgctgatttacctgatgaggatggtcaaggcactgatggacaacacaacc
ctacatctggagaaatatctgcatgaggtgatcccagctgtagccacctgcatcctgagt
aaacagctgtgtcagcggcctgacgtcgacaaccactgggctctgcgggacttcgcagcc
aggctcatgggcaacatgtgcagaaatttcagctccaacatcaacaacatccagtctcgt
atgacaaagacttacacaaagattttacatgatgagcagagtcatctggcaacaagatat
ggggccttggcaggacttgcagagatggggcatgatgtggtaaagtcactcctgattcct
aagctgaaggaagaaggagagaaagtgaagacgttgatggagggaccagtgcacaactct
gtggataagactgcagcagaacacatacgggcactgctgttgaaacactgtgctccagtc
ttagccaagatccgacccggccccgacaaccaggaacagtacaagacagacttcggctac
ctgggtcctctcctgtgtgctcacgtggtcaaggctcgtcaacaacaacaacaacaacag
ctccaagctaccaccaccactgctgcagctgccagtgttgtacagagaccaaccttacag
attccacagaaatcagaatggggacgagcatctgcagtcctgagcgcgatggcggcaccc
cgaactccgaccccccaggccaccaccccctccctcctcaccatctcccggccctccacc
cctgctaaccccccctctacccccaccacccccaccccaggtacccccaaccctcagaca
aaatacatcattgtttccacgacaaaggcgtctacttctactaccctcccttctacaagt
accatctctagtagcggtttggcctcgagcagttcgtcggctgcttctacgatcgtcaaa
ttcgtgtctgcggcacaaggaagtgcgagtgggggaagcgaaccacgagtcctcgcccag
ttaccctcgggacaaaaatatgttgtagtttcagttccttcgtcaggtcagaccaccact
acatcgcaggggaagacacaagcagtggtggtggtgaaatctgagggtcaggggtcacaa
ggtcaagggtcgattgttggggtgacctcagcagcagggactcttgcgcagttagcgacc
agttccagccaggacggcacaaaggtgtcttctgtatcacaaagtggagcgacttccaaa
cctaactcatga
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