Branchiostoma floridae (Florida lancelet): 118426913
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Entry
118426913 CDS
T01074
Name
(RefSeq) cohesin subunit SA-1-like isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bfo03036
]
118426913
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
118426913
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
DUF6315
AdoHcyase_NAD
Motif
Other DBs
NCBI-GeneID:
118426913
NCBI-ProteinID:
XP_035692423
UniProt:
A0A9J7M1I8
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All DBs
Position
12:complement(20526311..20570569)
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AA seq
1286 aa
AA seq
DB search
MMPALHAGQKAQDPGDFADIGSPHITRRGKGMASGSEGGTPEHPGHEEEHEVVPGEDSDF
EEPRKGRKRPAKGGGGAPSAKKAKTPGGKKGAGGRTPKPNGTATEEQAVTLFEVVKLGKS
AMQSVVDEWIDSYKQDRDMALLDLIQFFIQCSGCKGVVTAEMLHNMEHSDIIRKMTEEFD
EETGALHKKMLTASWVLHFQLPDLDSGDYPLIMTGPQYKRFKNNFCEFIAVLVRQCQYSI
IYDQYMMDNVISLLTGLSHSQVRAFRHTSTLAAMKLMTALVNVALTLSVNLDNTQRQYES
ERQKAQGKRASERLEILMQKRADLQENQEEVEHMMNSIFKGVFVHRYRDSLPEIRAICME
EIGTWMRQYSDTFLADSYLKYVGWTLHDKVGEVRKMCISTLQALYCNKENAQKLELFTNR
FKDRIVSMTLDKDMDVSVQAIKLVTMIMNDDILTSEDCENVYQLVYSSHRAVAQAAGEFL
NKRLFQQDDSGKQLKTKRGKKRSPNTPLVRDLVQFFIESELHEHAAYLVDSLWETNEMLK
DWECMTDLLLEEPGRGEEVLTDQQETALVEIMTCCIRQASEGIPPIGRASAKKVQTAREK
KQIYDDKVKLTEHLIQTLPALLGKYAVDAEKVINLLCIPQYFDLDIYTTSRLEKHLDLLL
KHMQDIVEKHAEQEVLEECSKSLMVLCSEDYPIHTKAMVSRGGLFDALVQKFKQSLETFF
QEGDEADEDDIFSVTSAQKRLMEFYKCHDLSPFDLFEKFIFIIKAANDKNYIPQEILIRS
IACAHMDVMWRFSRLDEHDPDKNDIRTINSCVKTFLEYCSQLVEGYVDPTIQEEAFMSIV
DILVVFARQVAANPVMKNLIHHTDPVTEVRLTSLLGERVFVGPEEEHQATDDEEDEANKI
EALHKRRNLLAGYCKLVVYNMVSIKTAADIFKHYMRYYNDYGDIIKTTLSKAREMDKVNT
ARTLNLALTQLFREVKGTQQPLDRTSQPFLSIKELARRFSLTFGLDPVKTRQAVAEIHKE
GIVFAITPLDDPDDPEGPPPFLSFLEILAEFSPKVMKQDRKTILNYLESKLRPGMINKID
DPWLPLLTYRNSLLEGEHGSKVVGARGIRGHGKKGGKSPSEMAAKRKLSLEANEAFAGKT
PNRPGQPLHTSTAVKRRRMDPEEGSEQSSERDESEQGSEREFEHTGKPALSQGSWAQVRH
HDVARKGRANISYSTHGRRGRGKQMPIEPEPEEADDSGDDDDIADFDTSDMHIGQSSPVD
MAQQIVNLPDNLFTSSPDIGDFSSGI
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgatgccagcactgcacgcgggtcagaaggcccaggaccccggggacttcgcagacatc
ggctcgcctcacatcacgcgcagggggaagggcatggcgtccggcagcgagggggggacc
cctgaacaccccggacatgaggaggaacatgaggttgttccaggagaagatagtgacttt
gaggagccacggaaggggaggaagcgtcctgcaaagggcggtggaggagcaccttctgcc
aagaaagccaagacaccaggtggtaagaagggggctggaggaagaactcccaagcccaat
ggaacagccacggaggaacaggctgtcaccctgttcgaggtggtcaagctgggcaagtct
gccatgcagtctgttgtagatgagtggattgactcctacaaacaggacagagacatggca
cttctggatctcatccagttcttcatccagtgttctggctgcaaaggcgttgtaactgca
gagatgttacacaacatggaacactctgacatcatccgcaagatgactgaagagtttgat
gaggagacaggcgctctgcacaagaaaatgttgacagcttcctgggtcctgcacttccag
ttacctgacctagacagtggagactaccctctcatcatgactgggcctcagtacaagaga
ttcaagaacaacttttgtgagttcattgctgtcctggtgcgacagtgtcagtacagcatc
atctacgaccagtacatgatggacaacgtcatctccctgctgactggactgtcccactct
caagtacgggcgttcaggcacacaagcacgctggcagcgatgaaactgatgacagccctt
gtgaacgttgccctgaccctgagtgtgaacctggacaacacccagcggcagtacgagtcg
gagagacagaaggctcagggcaaacgggccagcgagaggctggagattctcatgcagaag
agagcagaccttcaagagaaccaggaggaagtcgaacacatgatgaactccatcttcaag
ggagtctttgttcacagatacagggattccctccccgagattcgagccatctgtatggag
gagattggtacctggatgaggcagtactcagacaccttccttgctgacagctacctgaag
tatgtcggctggactctgcatgacaaggttggagaggtgcgtaagatgtgcatctccacc
ctgcaggcgctgtactgtaacaaggaaaacgcccagaagctggagctcttcaccaaccgc
ttcaaggatcgcatcgtctccatgactctagacaaggacatggacgtctccgtacaggct
atcaagctggtcaccatgattatgaacgatgacatcctgacgagtgaagactgtgagaac
gtgtaccagctggtgtactcctcccaccgtgccgtggcgcaggccgcgggagagttcctc
aacaagcgcctcttccagcaggacgactcgggcaaacagctcaagaccaagcggggcaag
aagaggagtcccaacacaccactcgtcagagatctcgtgcaattcttcatagaaagcgag
ctccatgagcatgcagcataccttgtagatagtctgtgggagacaaacgagatgctgaag
gactgggagtgtatgacagacctgctgctggaggaaccaggcaggggagaggaggttctg
acggaccagcaggagactgccctagtggagatcatgacctgctgtatccgacaggcttcc
gaggggatccctcccatcggcagggccagcgctaaaaaggtgcaaacagccagggagaag
aagcagatctatgatgataaagtcaaacttacagagcacctcatccagacactgccagca
cttttaggaaagtatgccgtagatgcggagaaggtcatcaacttgctgtgcatccctcag
tactttgacctggatatatacacaaccagtaggcttgaaaagcacttggatctcctcctg
aagcacatgcaggatatagtagagaaacatgcagaacaagaggtgttagaggagtgcagt
aagtcgttgatggtgctgtgtagtgaagactaccccatccacaccaaggccatggtgtct
cggggcggtctgttcgatgccctggtgcagaagttcaagcagagtctggagacgttcttc
caagagggcgatgaggcagatgaagatgacatcttcagtgtgacgtctgcccagaaaaga
ctgatggagttctacaaatgtcacgacctctccccattcgacctcttcgagaagtttatc
ttcatcatcaaagcagctaacgataaaaactacattccacaggagatcctaatccgctcc
attgcctgtgctcacatggacgtcatgtggaggttctccagactggatgaacatgatccg
gacaagaatgatatcaggacaatcaacagttgtgtcaaaacgtttctggagtactgcagc
cagttggtggaaggttacgtggaccctaccattcaggaggaggcattcatgtccatcgtg
gacattctggtggtctttgcacgacaagtggcggccaatcccgtcatgaagaacctgatc
caccacacggaccccgtgacggaagtcaggctgacgtctttgctcggagagcgggttttt
gtcggtccagaggaagaacaccaagctactgatgatgaagaggatgaagccaataagata
gaggcgttacacaagaggcgaaacttgctggctggctactgcaaactggtggtctacaac
atggtcagcatcaaaacagctgccgacatctttaaacactacatgaggtactataatgac
tatggtgatatcatcaagacgacgctgtccaaggctcgagagatggacaaagtcaacacc
gccagaactctcaaccttgcactcacgcagctcttcagagaagtgaaaggaactcaacag
ccgcttgataggacttcacagcctttcctgtctatcaaggagctggcgagacgattctcc
ctgacctttggtttggatccagtcaagacacggcaggccgttgcagagattcacaaggag
gggatagtgtttgccatcaccccgctagatgaccccgacgacccggaaggcccaccaccg
ttcctcagcttcctagagatcctggctgagttcagtcctaaagtcatgaagcaggatcgc
aagaccatcttaaactatctggagagcaaactgaggccagggatgatcaacaaaatagac
gacccgtggctgccactactcacctaccggaacagcctactggagggcgagcacgggtcg
aaggtcgtcggggctaggggcatccgaggccatgggaagaagggaggcaagagtccatca
gaaatggcagccaagaggaaactatccctggaagcaaatgaagcctttgccggcaagacc
cccaaccgccccggccagcccctgcacacgtccacagcagtgaagaggagaagaatggat
ccagaggagggctcggaacagagctcggagagggacgaatcagaacagggctcggaaaga
gaatttgagcatacgggcaagccagcgctctcgcagggttcatgggcgcaggtcagacac
cacgatgtcgctcggaaaggtcgtgccaacatcagctactccactcacggcagaaggggg
aggggtaaacagatgccaatagaacctgaacctgaggaggctgatgacagcggggatgat
gacgatattgcagacttcgatacgagcgacatgcacatcggacagtccagccccgtcgac
atggcccaacagatagtgaacctccccgacaacttgttcacatcttcacctgatattggg
gacttttcttctgggatttga
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