Branchiostoma floridae (Florida lancelet): 118426956
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Entry
118426956 CDS
T01074
Name
(RefSeq) uncharacterized protein LOC118426956
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfo03400
]
118426956
DNA repair and recombination proteins [BR:
bfo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
118426956
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Chromo_SEND1
Motif
Other DBs
NCBI-GeneID:
118426956
NCBI-ProteinID:
XP_035692480
UniProt:
A0A9J7N7A3
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Position
12:complement(9814644..9825275)
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AA seq
1154 aa
AA seq
DB search
MGVQQLWTILAPVKTHCALESLQGKTLAVDLSMWVCEASGVKAMTGAVTRPHLRNLFFRV
SHLTKMGVGLIFVVDGEPPELKFQTMVKRNQGRFGASKTGPDGQKKGLVKPKKMKRSHFK
AILKECILLLDGLGIPHVQSKGEAEAFCALLNRENLVDGCLTDDGDAFLYGARTVYRNLT
LDKKDPHVDCYQMTDIEEKLLLDRNKLVGLALLLGCDYCPKGVPGVGKELAVRVMTALET
CDVLERFKVWRSEAPCGMTSQLTGSQKRVKNSSIEVTVMRKALTDPAFPDTKIINEFLVT
KDTCPPQKLEWKRPRLLVLQELNLRLLEWPEEYTLEKVLPLVTYWEMSHLQTPHQKENRP
SLSPHSVVKTRTRNGVPCLEVQWYKPDGITTEEDYVTTIEPEDLFTSAFPCLVQEFREKK
AAQQSRKKGGKAKAKQKCTDDMTETDSQQQGDTQEEEQANRPAVPCVVDNSLALDFSKLS
LNKCNVNINATSLGQGKTAKSTTRGCKEDTLLCRLNEKSATSQFVGSSEKVLPSHPLGIS
KLDPNFSLGINDFSFMSNADGDTSITTNTCLSDHTTEQGCMSKIYPDLKGQNSIESPSPV
SPQVMLPLMERLQLKGEKRRQLKVEKRSSYKDVPQSKPLKTSHTASAQVMSNQNRPEKAT
KTERAGGQIIEPKGSLQHTLKVSHEQSVERQRIAPVLSKGTDSLIELPQPVAGKTKEVKE
KKVHTNKSKDDLKKKILQTDPDSLDLRKVLMCNTVSIQSSCATKATPEERSVKTERIAPV
QSKATEGPVEQPRPVAVKTKQVKEKALHANKSKEDSKKLKAPLCNPVSIQSSCATEATTE
DFDFEEQSVKTQRIAPVVSKATEGPVELPRPVAGKTKQLKKTALHTNKSKEDLKKKILQA
DSDSVELRGAPMSNPVSIRSSCATEATPEEQSVKTHKIVPLVSKAMDGPVELPQPVAGKT
KQVKETKIHTNKSKYDLKKKILQTDSDSLDLRKAPLCNPVSIWSSCATEATDEQLVEKQR
ITPVLIKAKEGTVEKPQPVAVKTKQVKGKELHSSRSTDNLKKKILQADSDKAPIYSPVSI
QSSCPTQASVLDDTKAISASCIPSEIKAAPACSTARPMDDVSSPVGTTMSLVERLKLRVG
HSKGKVLDAMQGKH
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgggggttcagcagctgtggaccatccttgcccctgtgaagacccactgtgcgctggag
tccctgcaggggaagactctagccgtggacctgagcatgtgggtgtgtgaggccagcgga
gtcaaggctatgactggagccgtcaccaggccacatctaaggaatctattcttccgagtg
tctcatctgaccaaaatgggcgtcgggttgattttcgtggttgatggggaaccaccagag
ctgaagttccaaaccatggtgaaacggaaccagggtcggttcggggccagcaagactggt
ccagatggacagaagaaaggcctggttaaaccaaagaaaatgaagaggtctcactttaag
gctatattgaaagagtgcatcctcctgctggatggactgggaatcccccatgtgcagagc
aagggagaggcagaggccttctgtgctttactgaacagggaaaatttggtggatggatgc
ctgactgatgatggggatgccttcctgtatggggccaggactgtctacaggaacctcaca
ctggataaaaaggatcctcatgtggactgttatcagatgacagacatagaagagaagctg
ctgttggatcgtaacaagctggtcggcctggccctgctgctgggctgtgactactgtccc
aaaggggtgcctggtgttggcaaggaactcgctgtcagagtcatgactgccctcgaaacc
tgtgatgtactggagcgatttaaagtctggagatctgaagctccgtgtgggatgaccagt
cagttgacaggaagccagaagagggtcaaaaacagttccattgaagttactgtgatgaga
aaagcactgacagatccagcttttcctgatacaaagattatcaatgagttcctggtcaca
aaagacacctgtcccccacaaaagttggaatggaagaggccaaggttactcgtcttacag
gagctgaacctgcggttactggagtggcctgaagagtacacactagagaaggtactgcca
ctggtgacatactgggagatgtctcacttacaaactcctcatcagaaggagaaccgacca
tcactgtctcctcacagtgtggtgaaaactcgcacacgtaacggtgtcccctgtctggag
gtgcaatggtacaagcctgacggtatcactacagaagaggactatgtcacaacaatagaa
cctgaagatctcttcacatcggccttcccatgcctggtacaggagttcagggagaagaag
gctgctcaacaaagtaggaagaaaggaggaaaagcaaaggccaaacagaaatgcacagat
gacatgacagaaacagactcccaacagcagggtgacacacaagaagaagaacaagcaaat
aggcctgctgttccctgtgttgttgataacagtctagctttggatttctccaaactctca
ctgaataaatgtaacgttaacatcaatgcaacatcactaggccaaggaaagacagctaaa
tcaactacaagaggctgcaaagaggacactttactttgtagattgaacgagaagtcagct
acatcacagtttgttgggtcttctgaaaaggtcttgccttctcatcctcttgggatcagc
aaactggacccaaatttctccctcggaatcaacgacttttccttcatgtcaaatgctgat
ggagatacaagtattaccactaacacatgtctgtcagatcacactactgaacagggttgc
atgtcaaagatatatccagatctgaaagggcaaaacagcatagagtctccgtctccagtc
tcaccccaggtaatgttaccacttatggagaggctacagttgaagggagaaaagaggaga
cagcttaaggtagagaaacgatcatcctacaaggatgtgcctcagtctaagcctctaaaa
accagtcatacagcttcagcccaggtgatgtcaaaccagaacaggcctgagaaagctacg
aagactgagagggcaggtgggcaaattatagaacccaaaggaagtttacaacatacttta
aaagtaagtcatgagcagtcagttgagagacaaagaatcgctccagtgctgagcaagggc
acagacagcttgattgaactcccacagcctgtagcaggtaaaaccaaggaagtaaaggag
aaaaaggttcacacaaataaaagtaaagacgacctgaaaaagaagatactacaaactgac
ccagactctttggacttgagaaaggtattgatgtgtaacacagtttccatccagagtagc
tgtgctacaaaagcaacaccagaggagcggtcagttaagacagaaagaatcgctccagtg
cagagcaaggccacagaaggccctgtggaacagccacggcctgtagcggtcaaaaccaag
caagtgaaggagaaagcacttcacgcaaacaaaagtaaagaagactcaaaaaagttaaag
gcaccactgtgtaacccagtttccatccagagtagctgtgctacagaagcaacaacagag
gactttgactttgaggagcagtcagttaagacacaaagaattgctccagtggtgagcaag
gccacagaaggtcctgttgaactgcctcggcctgtagcagggaaaaccaagcaactaaag
aagacagcacttcacacaaacaaaagtaaagaggacttgaaaaagaagatactacaagct
gactcagattccgtggagttaagaggggcaccgatgtctaacccagtttccatccgaagt
agctgtgctacagaagcaacaccagaggagcagtcagttaagacacacaaaattgttcca
ttggtgagcaaggcaatggatggccctgttgaactcccacagcctgtagcagggaaaacc
aagcaagtgaaggagacaaagattcacacaaacaagagtaaatacgacttgaaaaagaag
atactacaaactgactcagactctttagacttaagaaaggcaccactgtgtaacccagtc
tccatctggagtagctgtgctacagaagcaactgatgaacagttggttgagaaacaaaga
atcactccagtgctgatcaaggccaaagaaggcactgttgaaaagccacagcctgtagca
gtcaaaaccaaacaagtgaaggggaaagagcttcattcaagcaggagcacagacaactta
aaaaagaagatactgcaagccgactccgacaaggccccaatctacagtccggtttctatc
cagagtagctgtcctacacaagcatcagtacttgatgataccaaagccatatctgcatct
tgtataccatctgaaatcaaagctgccccagcctgcagtactgccagaccgatggatgat
gtaagcagtcctgttggtaccaccatgtctcttgtggagcgactgaaactccgcgtggga
cactccaaggggaaagtccttgatgcaatgcagggaaaacactga
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