Branchiostoma floridae (Florida lancelet): 118427012
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Entry
118427012 CDS
T01074
Name
(RefSeq) slit homolog 2 protein-like
KO
K07523
netrin-G1 ligand
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118427012
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bfo04515
]
118427012
Cell adhesion molecules [BR:
bfo04515
]
Immunoglobulin superfamily
NGL family
118427012
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_14
LRR_9
LRR_At5g56370
Pou
Motif
Other DBs
NCBI-GeneID:
118427012
NCBI-ProteinID:
XP_035692542
UniProt:
A0A9J7M0W3
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All DBs
Position
12:13958060..13966333
Genome browser
AA seq
414 aa
AA seq
DB search
MGGKLRHLLIFLLIIMKELNVPEAGCSCEPSSPCRCTSMGLTSIPQNLPTSISMLDLDGN
QITSIQAGSFTNLTRLKALHLHFNMITVIEKGAFASLSRLETLTLSFNQMTVIKSDLFVN
LIRLRELWLDGNQITNIQLGALCYLSQLQMLNLCFNKITNIPSGLFSNLHQLQRLYIKYN
KITMIQPCTFANLIHLKELRLDHNQITSIQSSALTNLTQLQELNLSYNKITMIDSTFFLY
LIHMHKLVSLSINLYRNPWQCDCRMFYVRLLVYNWGFATSGTFIDRMICARPAKISGEKL
MDADVGEMICDEKPTTSTPPVDVQETLKDSYNCAGSGHDSNLIGQDQPQAITEANFNTTA
TVVASVHGQPGQGQYQATTKSLVVKNPVYGPEPTAFKLSHLYNAECQGNSQADP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaaagctccgacacctgctgattttccttctcatcatcatgaaggagctcaat
gtgccagaagctggctgcagctgcgaaccatcatcaccgtgcagatgcaccagcatgggc
ctcaccagcatccctcagaacctccctacatccatctccatgttagacctggacggtaac
cagataacaagcattcaggctggttctttcacaaatctaacccggctaaaagcgttgcat
ctgcactttaacatgataacagtgattgagaaaggcgcatttgcaagtctgtcccgtcta
gaaacgttgacgctatcctttaaccagatgacagtgattaagtctgatttattcgtaaat
ctaatccgtttaagagagttgtggctggatggtaaccaaataacaaatatccaacttgga
gcactctgttatctatcccagctacaaatgttgaatctgtgctttaacaaaataacaaat
attccttctggattgttttcaaatctacaccagctgcaaaggttgtacattaagtacaac
aagataacaatgattcaaccttgcacatttgcaaatctgattcaccttaaagaattgcgt
ctggatcacaaccaaataacatcgattcagtctagcgcattaacaaatctaacccaactt
caagaattgaacctatcttataataagataacaatgattgattctacattcttcctttat
cttatccatatgcacaaacttgtaagtttaagcataaacctttataggaacccatggcag
tgtgattgtaggatgttctacgttaggttactagtgtataactggggattcgctacatct
ggtacatttatagaccgaatgatatgtgcccgacccgcaaaaatcagtggagagaaatta
atggatgctgatgttggagaaatgatatgtgatgaaaagccaaccacatcaacacctcct
gttgatgtgcaagaaactttaaaggactcctacaattgtgctggaagtggccatgatagt
aatctgataggacaggaccagcctcaagctattactgaagccaactttaacacgacagct
actgtagtggccagtgttcacggtcagccagggcagggtcagtaccaggccaccacaaaa
tctttggttgttaaaaatccagtttatggcccagaacctacggccttcaagctgagtcat
ctgtacaatgccgaatgtcaaggcaattctcaggctgacccttga
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