Branchiostoma floridae (Florida lancelet): 118427038
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Entry
118427038 CDS
T01074
Name
(RefSeq) nucleoporin NUP35-like
KO
K14313
nuclear pore complex protein Nup53
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118427038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118427038
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118427038
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_Nup35
Nup35_RRM_2
PspB
Motif
Other DBs
NCBI-GeneID:
118427038
NCBI-ProteinID:
XP_035692572
UniProt:
A0A9J7M0Y3
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All DBs
Position
1:12121761..12125097
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AA seq
360 aa
AA seq
DB search
MDSQTHEPMTLGSPTHGPSAGGATFLPGFLLGDPPAAPSPSFGAGRTWSSPHQLSSSFSR
QQSGSTPSSHGPGSGLGRSMSLQSGSTPGSGHTHLTPRSDRLEGKGTTLHSVSKDKSGAP
PVQGLFSHSSTPTGSVFRGTPERQQLEFTVNRTPVLTGVAHTTPSGGVLFSPGPTPGVQN
VPKPSPPSPAQTDPFYTQGEALTAEDQLDETWVTVFGFPPAATSFILQQFSQYGNIVKHV
IASNGNWLHLHYQSKMQAKKALSKNGKVFGGSIMVGVTLCIDKSVMEQTVEPSTESSSAV
FTPIRPRHQSEGAVSRHTPIRPLTAAYKAASNEHEVVNDSKTPQKNGNMVYKAMEYMFGW
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggattcccaaactcacgagccgatgacgctagggtcgccaactcacggtccgagcgcg
ggaggagcgacgttcctgcccgggttcctcctgggcgatcctccggcagcgccttccccg
agtttcggagccggaagaacgtggtcctccccgcatcagctgagctccagtttcagcagg
cagcagtcagggagcactccatcctcccacggaccgggcagtgggctggggcggtccatg
agcctccagtccggcagcacccccgggtcgggacacacccacctcacccctcggtcagac
cgactggaggggaaggggacgacactccacagtgtgtctaaggacaagtcaggagcaccc
ccagtccaggggctgttcagtcattccagcacccccactggttccgtcttcagaggtacc
ccagaaagacagcagctggaattcacagtcaacaggacaccagttcttacaggtgtggca
cataccactccatcaggaggggtgctcttcagccccggacccactccaggtgtccagaat
gtcccaaagcccagccccccatcccccgcccagactgacccattctacacccagggcgag
gccctgactgcagaggaccagttggatgagacgtgggtgacagtcttcggcttcccgcct
gccgctacgtccttcatcctacagcagttctcgcagtacggaaacatcgtcaaacacgtg
atagcatccaacggcaactggctccacctgcactaccagtccaagatgcaggctaagaaa
gccctgagtaaaaacggaaaggtgtttggtggaagcatcatggtcggagtgacgctgtgt
atagacaagagtgtcatggaacagacggttgaaccaagcacggaatctagcagcgcggtg
ttcactccgataagacccaggcaccagtccgagggagccgtatcgaggcatactcccatc
aggccgctcacggctgcatacaaggcagctagcaatgaacatgaagtcgtgaatgactca
aaaacaccacagaagaatgggaacatggtttacaaagcaatggaatatatgtttggatgg
tag
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integrated database retrieval system
