Branchiostoma floridae (Florida lancelet): 118427097
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Entry
118427097 CDS
T01074
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIP12-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118427097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfo04121
]
118427097
Enzymes [BR:
bfo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
118427097
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
HECT type E3
118427097
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
ARM_ARMC5
Arm
Motif
Other DBs
NCBI-GeneID:
118427097
NCBI-ProteinID:
XP_035692626
UniProt:
A0A9J7N7L1
LinkDB
All DBs
Position
12:18118526..18148971
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AA seq
2064 aa
AA seq
DB search
MEEECPRSARHSPSPDRSSSQPAKRKATHRPATKEPAKKLVKTEVQTNSILPKRGAGRLR
KDSASSTVSSRSFTSTSTSESSLRQGSSNKERRPSTSSSASSETSLVPGTNKRVRKLSGG
TSAKKKKEITHISGQSSRGYGLRSHPDVKSGSKPKTLSSKLNSEKFSKEEGASGTSSSSA
LPLLSGLPPTGKSKSRKFSDSKNHSKNLGKNSSRQSSSKTKESSKSKVGKATSKSSSSAT
GGESSAKSGRPDKGSDNRDSRKREELFNSRTSGGGRRRDSDEGSPNFNNLNPTVSLSRSR
LRSGGKEGEPDHPGPSGLAEPKSDKGKGKGKGKRRDKIPPEPESLRRSARNRTTGSCASS
SRRGSGPSKRSTAGAGLEENMNNPNATQDGTANNTGTARASEEATQGAIGGAGAGAVGGA
SALATSGGESESDDSEMGRLQALLEARGLPPHLFGALGPRMHQLLHRTMGGGASSKAHTL
LQGLQSADESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFDMMNHAC
RALTYMMEALPRSSTVVLEAVPVFLEKLQVIQCMDVAEQSLTALEMLSRRHSKAILQAGG
LAACLLYLEFFSINAQRTALAIAANCCQTITPEEFHMVQGSLPLLSSRLQHQDKKSVESV
CLAFARLVDNFQHDAKLLKELTGHGLLTNIQQLLVVSPPIISTGTFIMVIRMLSLMCASC
PELAVQLLKQNITDTLRYLLVGPSEPQASNEEFELLPRTPQELYEITSLIAELMPKLPSD
GIFSVDAMLRKNNNTSTDEAIWQWRDDRGVWHPYTRIDNRIVEAAHQCGEDEISLSTMGR
TYTIDFNSMQQINEDTGTARPVQRRPNQGGTNSSVSPDEVKEDARAAVLKEDKELASAFI
RSLFGVLYEVYSSSAGPSIKHKSLRAIQRVVYYADAELLKEVLKSYAVSSHIAGMLSSQD
LKVVVGALQMAEILMQKLPDIFSVFFRREGVMHQVKKLTKIDTSVTPASSPMKESAPGPS
QEHEPEDIYAPPKGRLSDAMKRKSGPIPKTRSARRRYSPFCEEPSSPVAEALDVFTRSSG
AKGFGKGTGTSLTGGTSPKPSFLASLNPSRWGRGSTGSTSSGASGSPTDKNAPKDGSSLG
LPRSSSNQGLASNKEKIKQWIKDRATKFEKDYFSHETQGISHPALDVLRRLCDAVEKLAL
EKDRGIDCLVDISRIVTDSDVSPFEIQHSGLVKSLLAYLTSQSENDAVTRIVRLKRFLHV
FLDCPAPDGTMVVKSADPSNQPALFPLVAKLNGCINQLEQFPVKVHDLPGGGAATGRGSQ
ALKFFNTHQLKCQLQRHPDCKNVKQWKGGPVKIDPLALVQAIERYLVVRGYGRIRDSEDE
DSDEDASDDDVDESLASVSTMATFSGPNVRHRLQFFLSDHLLPYNMTVYQAIRQYGQTAE
EDRETDDESNPLGRAGIWIKTHTIWYKPVPFDEDSKTELVAAASATKKGKGTSPNKGPAK
AAARKHDELWNEGVCPGPLSPLKPLLVPTLPGNVRIDDPSLEVICLMRVIHALNRYWYTL
FENAPTKPILPPSDFINSKLTAKATRQLQDPLVIMTGNLPPWLVEIGKACPFLLPFDTRQ
TLFYMTSFDRDRAMQKLQDSSPEVTSTDSTDSRVAPRLDRRKRTVSREDLLKQAESVMND
LGNSRAMLEIQYENEVGTGLGPTLEFYALVSREVQRADLDLWRGEAVPLPDSKGNQDGTL
YVHSSLGLFPQPYGRTAKLGHVTKAKIKFRFIGKFMAKALMDSRMVDFPLSLPFYKWVLG
QEASLSVTDIQYLDPVVAKSVSQLVDVLRQKSRLQEDKAHTAQSLQLALESLTLDGCRIE
DLDLDFTLPGHPNIELKKGGKDIPVTIHNLEEYVKLVIHWTLIEGVSRQFESFREGFESV
FPMSHLQYFYPEELDQLFCGNKTEPWDIKMLMETCRPDHGYSHDSRSVKHLFEIMSNFDN
DEQREFLLFVTGSPRLPVGGYRALNPPLTIVRKAVEAPENPDDFLPSVMTCVNYLKLPDY
TSIEVMANKLRTAMKEGQHSFHLS
NT seq
6195 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaatgtccaagaagcgcacgacattcgccttcgcctgatcggtcgtcttcc
cagcccgccaagcggaaagctacacaccgaccagcgacaaaagagccagccaagaagctg
gtaaagactgaggtacagacgaactccattcttcccaagagaggagcaggaagacttcgc
aaggactctgcttcttctactgtcagcagtaggagtttcacaagcaccagtaccagcgag
agttccctccgacagggaagcagtaataaagagagaagaccgagcacttcgtcttccgca
agcagtgaaacttcgttggtcccaggaacaaacaagagagttagaaaactcagcggaggt
acatctgcgaaaaagaagaaggaaatcacccatatttctggccaatcctctagaggttat
ggtcttaggtcccatcctgacgtaaaatcaggatccaagcctaagacattatcaagtaag
ctaaactctgagaagttttcaaaagaagaaggagccagtggtacaagttcttctagtgca
ttgccattgttgtcaggactgccacctacgggaaagtccaagtcgagaaagttctcggat
tccaagaaccacagtaagaatttggggaagaactcctcccgacaatcttcaagcaaaaca
aaagaatcatcaaaaagcaaagtggggaaggcaacatctaaaagtagttcctccgcgact
gggggagaaagctctgcgaagtccgggaggcctgacaagggatcggacaaccgagactct
cgtaagagagaagaactcttcaattccagaacttccggtggggggaggagaagggactcc
gacgaagggagtccaaactttaacaatctcaatcccacagttagtttatccagatccaga
ctaagatcaggaggaaaagaaggagagcccgaccaccctggtccttcagggttagcggag
cctaagtcagacaaggggaaaggtaaagggaaggggaagcgtcgtgacaagatcccgccc
gagcccgagagcttgcggcggagcgcgagaaacagaacaacgggatcctgtgcaagcagc
agtagaaggggctcggggccgagcaagcgcagtacagcgggggcaggattggaggaaaac
atgaataacccaaatgcaactcaggatgggacagccaacaacactggtacagccagggcg
tcagaagaagcaacacaaggagctatcggaggagcaggagcgggagccgtggggggcgcc
agcgccctggccacctccggaggggagagcgaatcggatgactcggagatgggacgtctc
caagccctactagaagcccgcggtctgcccccgcacttgttcggagccctgggccccagg
atgcaccagctcctccaccgcaccatgggagggggagcctccagcaaggcacacacactc
ctgcagggactgcagagtgctgatgagagtcaacagctgcaggctgtgatcgagatgtgc
cagctgctggtgatggggaatgaggagactctgggaggattccctgtcaagtctgtggtg
ccagccctgataaccctgctccagatggagcacaactttgacatgatgaaccatgcctgc
cgggccttgacatatatgatggaggccctgccgaggtcatccactgtggtgctggaggca
gtgcctgtattcttggaaaagctacaggtgatccagtgcatggatgtggcagagcagtcc
ctgacagcgctggagatgctctccaggagacacagtaaggccattctacaagcaggaggc
cttgcagcttgcctcctgtatctggagttcttctccatcaatgcccagcgtactgccctg
gccattgctgccaactgttgtcagaccatcactccagaggagttccacatggtgcagggg
tccctgcccctcctgtcatcaaggcttcaacatcaggacaagaagtcagtggagagtgtc
tgccttgcgtttgcccgacttgtggacaacttccaacatgatgccaaactgctgaaggag
ctgacaggccatgggttactcaccaacatacaacaactcctagtggtgtctcctccgatc
atcagcacaggcacgtttatcatggttatccgtatgctgtccctgatgtgtgcctcctgt
cctgagctggccgtgcagcttctgaagcagaatatcacggacacgctcagatacctgctc
gtcggcccgtcagagccccaggccagtaacgaagagtttgaactactcccgagaacgcca
caagagctgtatgagatcacatccctaatagcagagctgatgccaaagctgccgtctgat
ggcattttctcggtggacgccatgctgagaaagaacaacaacaccagtacagacgaggcc
atctggcagtggcgggacgaccgcggtgtgtggcacccctacacacgcatcgacaacaga
atcgtagaggctgcacaccagtgtggtgaagacgagattagcttgtctaccatgggaaga
acctacaccatcgacttcaactccatgcagcagattaatgaggacacaggcacagccagg
cctgtacagaggagaccaaaccagggagggaccaactcttcagtgtccccagatgaagtg
aaagaagatgcccgtgctgctgtgttgaaggaagacaaagagttggcctccgcgttcatc
cgtagtctgttcggggtgctgtatgaagtgtacagctcctctgcaggaccgtccattaaa
cacaagtccctccgagccatacagagggtggtgtactatgctgatgctgagctcctcaag
gaagtcctgaagtcttatgctgtatcaagccatattgcggggatgctgtcgtcccaggac
ctgaaggtagtggtgggggctcttcagatggcagagatcctcatgcagaaacttcctgat
atattcagtgtcttcttcaggagagaaggtgtgatgcaccaggtgaagaagttgactaag
atagacacgtcagttaccccagcgagctccccaatgaaggagtctgcaccagggccttcc
caagaacatgaaccagaggatatctatgctccacccaaagggagactaagtgatgccatg
aagagaaagtcaggtcccatccctaagacaagaagcgccagaagaagatattctcctttc
tgcgaggagccttccagcccagtggctgaagctctggatgtcttcacacgatcgtcagga
gccaaagggttcgggaaaggcactggaacttcattaactggtggcacgtcccccaagcca
tccttcctggccagcctgaacccgtcccgctgggggcgtggcagcactggtagtaccagc
agtggagcatcaggctcacccacagacaagaatgcaccaaaggatggttccagtctcggt
cttccccgttcttccagtaaccaaggtctggcttcaaacaaggagaagattaaacagtgg
attaaggacagagccaccaagtttgagaaggattacttcagccacgagacccaggggatt
agccacccggctctggatgtgctgagaagactgtgtgacgcagtggagaagttagcccta
gagaaggacagaggtattgactgcctggtggacatcagcaggattgtgacagattctgac
gtctcaccgtttgagatccagcacagcgggctggtgaagtccctcctggcgtacctcacc
agtcagagcgagaacgacgccgtgactcgcatcgtcagactcaagaggttcctgcacgtt
ttcctggactgccccgctccagatggcaccatggttgtgaagagtgcagacccgagtaac
cagccagcgttgttccctctggtcgccaagctgaacggctgtattaaccagctggaacag
ttccctgtcaaagtgcatgacttaccagggggaggggctgccactggaaggggttcgcag
gcactgaaattcttcaacacacaccaactgaagtgtcagctccagaggcaccccgactgt
aagaacgttaaacaatggaagggtggtccggtcaagatcgaccccctggcactggtacag
gctatcgagagatacttggttgtccgcggttacgggagaatacgagacagcgaggatgaa
gacagcgacgaagatgcctccgacgacgacgttgatgaatctttggcaagtgtttcaacc
atggccacgttctctgggccgaatgtgcggcacagactgcagttcttcctgagtgaccac
ctgcttccctacaacatgactgtgtaccaggcgatccgccagtacggacagacagccgag
gaggacagggagacagacgacgagtccaaccccctggggagagctgggatctggatcaag
acgcacaccatatggtacaaaccagtccccttcgatgaggacagtaagacagaactagtg
gcggctgcctcagctaccaagaaggggaaggggacatcccccaacaaggggccggccaag
gcagcagctaggaaacatgatgaattgtggaacgagggagtatgtccaggtccgttatca
cccctgaaacccctgctggtgccaaccctccctgggaacgtacgcatcgacgacccgtcc
ctagaggtcatctgtttaatgagggtgatccacgctctcaacagatattggtacacatta
tttgagaatgcgcccacgaagcccatcctgcccccatctgacttcatcaacagtaaactc
acagcaaaggccacaaggcaactccaggaccccctagtcataatgactggcaaccttccg
ccctggttggtggagataggcaaagcctgccctttcttactcccattcgacacgcggcag
acccttttctacatgacgtcgtttgaccgagaccgtgctatgcagaagctgcaggacagc
tctcccgaggtcaccagtacggactccacagatagcagagtggcaccaagactagatagg
agaaagagaacagtttctagagaagacttgttgaagcaggctgagtcagtcatgaatgac
cttggcaactccagggccatgttggagatacagtatgaaaatgaggttggtacagggttg
gggccgaccctggagttctatgcactggtgtccagggaggtgcagagagccgatctggac
ctgtggagaggagaggctgtgccactcccagactctaaaggaaaccaagatggaactttg
tatgtgcattcctcattgggactcttcccacagccctatggcagaacagccaagcttggt
cacgtgaccaaggccaagatcaagtttagattcatagggaagttcatggccaaggccttg
atggactccagaatggttgacttcccactgagtctgcccttctacaagtgggtgctaggg
caggaggcatccctttctgtcacagatatacagtatctggaccctgtcgttgccaagtct
gtgtcccagctggtggatgtgctgagacaaaagtctcgtctccaagaggacaaagcacat
actgcacagagcctgcagttggccctggaaagcctgacattagatgggtgtagaatagag
gacctggatctggacttcacgttacccgggcacccaaacatagagctgaagaagggaggc
aaggacatcccagtcactatacataacctggaggagtatgtcaagcttgtaattcactgg
acgttaatagagggcgtttcaagacagtttgagtcgttcagagaggggttcgagtctgtc
ttccctatgtcacacctgcaatacttttatcctgaagagcttgatcagctgttctgtggc
aacaagactgagccgtgggacataaagatgctgatggagacgtgcagacctgaccacggc
tactcccacgacagccgctccgtcaaacacctgtttgagatcatgagcaacttcgacaac
gatgagcagagagagttcctgctgtttgtcacagggagccccagactcccagtcggagga
taccgtgccctgaaccctcctctcaccatcgtacgcaaggccgtggaagcgcctgagaac
cctgacgacttcctcccatccgtcatgacctgcgtaaattacctgaagcttccagactac
acctccatagaggtcatggccaacaagctccgaacagcgatgaaagaaggacaacactcc
ttccacctctcatag
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