Branchiostoma floridae (Florida lancelet): 118427150
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Entry
118427150 CDS
T01074
Name
(RefSeq) low-density lipoprotein receptor-related protein 4-like
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04150
mTOR signaling pathway
bfo04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
118427150
04150 mTOR signaling pathway
118427150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118427150
Membrane trafficking [BR:
bfo04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
118427150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Vgb_lyase
DUF5050
SGL
EGF_LRP2
Motif
Other DBs
NCBI-GeneID:
118427150
NCBI-ProteinID:
XP_035692681
UniProt:
A0A9J7M0V8
LinkDB
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Position
12:complement(19565279..19583202)
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AA seq
1174 aa
AA seq
DB search
MGSSKYHVVVNVRVYSSTDEGSFLLVADNALDSILQIDVTSGSNVTLPFGDPRWPLSVDY
DPTTDFVYWTDRYDRDIKRARRNGTGRETIVKSGIISAYGLALDFAAGNVYWADSRARTV
SVARMDGSFARPLLTSPTVDSPGGLVLDPRNGYMYWTDWGSNDRIDRAAMDGSGHTTIIS
NLTDPNMITIDYSGNRLYFCDGGEHSIFSTDLLGNDKRRLLYLPSDYLFGIAIDDNSIYW
SSWTTKNIGMLSRSNMQQQNVLVDSLLSPNDIYVSMTTPTDVTNACSTSNGGCQELCLAN
PEGKTCACRWFWKLQQDGTCLPPGLRTPSYLWLDHDPDNSVTSVKMTAGNSSVIRGLRGQ
GRPFPFVTLFKSASPSRIEAIDYDFQRNLIFWADTGLRELHTVQLLQDGRIQSFSTLLEG
ISSGVEGIAVDWLNQNLYYTDSYLNWIAVVNYKDNPPRHHVIAHAGVDRPRGIAVHPQAG
FLFWSDWSRQKPRIERAVLSGEQRTELVNTDIGQPSGLVIGENRLYWADTFRDTIESCDL
DGNNREVFYTLRGTHFYDITFDGEEIMASDWSDDSINFIDGERTLYFKGEGYVYGVEFFD
QSRQQPGPTECQVNNGGCSHTCVGDPDGHKCLCLPNFHLADDNQGCIANEHSFSKALFVG
SDSGILQLPHNFLGLPEAGDWTDSYIVRGTEAFAMEFNYAGKMVFYTQQQDDGTQNIERL
SIIGEGDTMTIFENGQGIEGIAVDWVASNLYWTERRLGRIHVSKLDGSLRRVLISNLDQP
SAIAVHPGRSYVFWTEVGSDPKISRASPDGSNRQLLVSSQAEDIVGKPTALAIDYLQDRL
YWVTSDPGNVQSSNLHGGDVTTLWSSTTANPFGVAIYKDYVLWTDNSTQSLSFGRPSVFF
GILSEKTTNLSTAAYNIKVYDDTEQPVFTSACDDRNGLCTELCIPKGENRVCACAEGRYI
QADRVSCSDVPSILPTTPSPTVPTGGYSPEDFVLVADSDTGNISQVNITSGSNVTLPLRS
AYPVALDYDVATDYVYWSDYYDEKIYRAKRDGSDFEAIVDKSVIGIYGIFGLALDFAGQN
IYWTDWGTEIIGVAAMDGSNARAVFSQNLDYPQGIVLDPKEGYMYWTDSDYLKPRIERAA
MDGSERNILISSGLATPIGIAIDFNGNSIQYVDF
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgggatcctcaaagtatcatgttgtggtgaacgtccgcgtttacagttccaccgacgag
ggatcatttctgcttgttgctgacaatgccctcgacagcatccttcaaatcgacgtcact
tccgggtcaaatgtcacgcttccgttcggagacccaagatggccgctgtccgtggactac
gacccgacgaccgacttcgtgtactggacggatcgttatgatagagacatcaagcgggcc
cgccgcaatggtactgggagggaaaccattgtcaaaagcggcataatcagtgcctatggc
ctggcgctggactttgccgcgggtaacgtgtactgggccgactccagagcgaggactgtc
tcagtagcccggatggacggttcgttcgccaggccactgctgacgtcaccaaccgtcgat
agtccaggaggtctggtgttagacccgagaaatggctatatgtattggacggactggggg
agtaatgacagaattgaccgtgcagcgatggacggtagtggccatacaactatcatcagt
aacctgactgatccaaatatgatcactatagactacagtgggaaccgactgtacttctgt
gatggaggggagcacagcatctttagtaccgacctgcttggtaacgacaagcggcgactg
ctgtacctaccttcagattatctgtttggcatcgcgatagacgacaacagcatctactgg
tcatcatggacaactaaaaatattggcatgctgtccaggtccaacatgcaacaacagaac
gtccttgttgatagccttttaagtcctaacgacatctacgtgtccatgacaacacctact
gacgtcaccaacgcttgttccacgtcgaacggaggctgccaagaactgtgcctggctaat
ccagaggggaagacatgcgcctgccggtggttttggaaattgcagcaagacggaacatgc
cttccaccagggcttcggactccgagctacctctggttggatcatgatccagacaatagc
gtgacgtctgtgaaaatgacagcaggaaacagcagcgtcataagagggttgcgcggccaa
ggtcgtcctttccccttcgtgacactcttcaagtctgcgtcaccctccagaatagaggcg
attgattacgactttcagcgcaacctaatcttctgggcagacactggactgagggaactc
cacacggtacagttattacaagatgggaggatccaatccttctccacgctcctggagggc
atctcgtccggagtggagggcatagcggtcgattggctcaaccagaacctgtactacaca
gacagctacctcaactggatcgctgtagtcaactacaaagacaacccgccacgacatcac
gttattgcccatgcaggagtggataggccacgtggcattgctgttcatccccaagcagga
tttttgttctggagtgactggagtaggcagaagccgaggatagagcgggcagtgctgtca
ggagagcaacggacggaattagtaaataccgacattggtcaacctagtggtcttgtgata
ggtgaaaacaggctgtactgggccgacaccttccgtgacactatcgaatcatgtgaccta
gatggcaacaacagggaagtgttttatacacttcgaggaacacatttctatgacatcaca
tttgacggggaggagattatggcaagtgactggtccgatgactcaatcaacttcatcgat
ggggaaagaactctatacttcaagggcgagggttatgtctatggcgtggagttcttcgac
cagagccggcagcaaccaggtccaacggagtgtcaggtcaacaatggcggctgcagccat
acctgtgtgggagacccagatggacacaagtgtttgtgtttacctaacttccacctggcg
gatgacaaccaaggatgcattgcaaatgaacattccttctccaaggccctctttgtcgga
agcgattccggcatcctccagctgccgcacaacttccttggactgcctgaagccggcgac
tggacagattcgtacatcgtacgagggacagaagcctttgcgatggaatttaattacgca
ggaaagatggtattctacacacagcaacaagatgatggaacccaaaacatcgaaaggctc
tcgataatcggcgaaggtgatacgatgacaatcttcgaaaacggacaaggaattgaaggc
attgctgttgactgggtggcatctaacctgtactggacagagcgccgacttggacggatc
cacgtgtctaagctggacggatcactgcggagggtgctgatatccaacctggaccagcca
agtgctatcgcagtgcaccctggacgttcgtacgtgttctggaccgaggttggctcggat
ccaaagatttcccgtgcatccccagatggtagcaacagacaactactcgtctcctcccaa
gcagaagatatagtgggcaaacccactgctttggctattgattacttacaagatagatta
tactgggtaaccagtgaccctggtaatgtgcagtcctccaaccttcatggtggtgatgtg
acgaccttatggtcatcgactactgctaacccattcggtgttgccatatacaaggattat
gtgctatggacggataacagtacacaaagtctgagctttggtcgaccgtcagtcttcttt
gggatcttgagcgaaaagacgactaatttgtcgacagcagcatacaacatcaaagtgtac
gacgacacagagcagccagtgttcacaagtgcttgtgacgataggaacggcttgtgtacg
gagctatgtattcccaaaggagaaaatcgtgtctgtgcctgcgcggaaggacgatatatc
caagcagacagagtgagctgttctgacgtgccttcgatccttcccaccaccccatcacca
accgtaccgacaggtgggtactccccagaagacttcgttctggtagccgacagtgataca
ggcaacatctcgcaggtcaacatcacttccggttcaaacgtcacacttccgctacgatcc
gcctatccggttgcactcgactatgacgtagcaacagactatgtctattggtccgattat
tatgacgagaagatctatcgggctaaaagagatggctccgattttgaggcgatcgtcgac
aaaagtgtaataggtatctacggaatattcggactagcgcttgacttcgctggacagaac
atctactggaccgactggggcacagagattattggcgttgcagcgatggacggaagcaac
gcacgggccgttttctcccagaacttagactatcctcaaggcattgtgctggatccaaaa
gaggggtacatgtactggacggattcggactatttgaaaccaagaattgagcgggctgct
atggacggcagtgagaggaacatactgatcagtagcggtctggccacccctattggaatc
gccatagacttcaacggtaattcaatccaatacgttgatttttaa
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