Branchiostoma floridae (Florida lancelet): 118427201
Help
Entry
118427201 CDS
T01074
Name
(RefSeq) RNA-binding protein Nova-1-like isoform X1
KO
K14944
RNA-binding protein Nova
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bfo03041
]
118427201
Spliceosome [BR:
bfo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118427201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_Vigilin
KH_NusA_2nd
Motif
Other DBs
NCBI-GeneID:
118427201
NCBI-ProteinID:
XP_035692733
UniProt:
F2YLF7
LinkDB
All DBs
Position
1:4977070..4983933
Genome browser
AA seq
511 aa
AA seq
DB search
MLEWQSACGSAMASDFQDGGTHVAGVPALDVDPTDSRKRPLEGAVEMGNSKRSNFGGEGG
PEDGQLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVITG
SEDSLKSVHKFLMEKISQAPQPPAKSPSEQNANNNRAKQVKIVVPNSTAGLIIGKGGATI
KFIMEQTGSRVQISQKATNGINLPERVITITGEPEQNDKACAFIVNKIVEDPQSGSCPNI
SYATYTGPVANANPTGSPYASPMSPLQNGSASPTALAAQSLSNLGFSLGAAGLGPVGQAD
AAAAHITAALNTLATYGYSNITGGLGVSLGGGAATLPTAVGVTNGASPPATLLTNYSSNG
TATNGVRESSGFNGTSSAANGYNIGALGNANAAAFGAGSLGALGAFSGAAGLLGLANTEK
LLDGSKNVVELEVPENLVGAILGKGGKTLVEFQEYSGARIQISKKGEFTPGTNNRKVTIT
GTPAATQTAQYLVRARIAQEEAMRAKKQQQK
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgttggagtggcagagtgcgtgcggcagtgcaatggcctcggacttccaggatgggggc
acgcacgtagcgggagtacccgcgctggatgtcgaccctacggactcccgtaagagaccg
ttggagggagcagttgagatgggaaactcgaagcgatcgaacttcggtggggaaggaggg
cccgaggacgggcagctccttctcaaggtgctgatccccagttacgccgccggctctatc
atcggaaagggtggtcagaccatcgtgcagctacagaaagagacgggagcgacgataaag
ctctccaaatccaatgatttctacccaggaacgacagagaggatagttgtgattactggc
agtgaggattcactgaaaagtgtccacaagttcctcatggagaaaatcagccaagcacca
cagccccctgccaagtcacccagtgaacaaaatgccaacaacaaccgtgccaaacaggtg
aaaattgtagttcccaacagtacggcgggattgatcataggaaaaggtggagctaccatc
aagttcataatggagcagacggggtcgcgtgttcagatctcacagaaagccaccaatggc
atcaatcttccagagcgggtaatcaccatcacaggcgaaccggagcagaatgacaaagca
tgtgctttcattgttaacaaaattgtggaggatccacagagtggaagctgtccgaatatc
agctatgccacatacactggacctgtagccaatgcgaaccccactggttctccttatgct
agtcccatgtcaccactacaaaacggcagtgcttctcccactgccctggcagcacagagc
ctgtccaatcttgggtttagcttaggagctgcaggtttggggcctgtgggtcaggcggat
gcagcagctgcgcacatcacagctgcgctcaacacactagctacttacggctattccaac
attacaggtggattgggggtgagtttgggagggggggcggcaacactccctacggcagtc
ggcgtcacgaacggggccagcccgccagcaacgttactgacaaactacagtagtaatggc
acggccaccaatggtgtgagagagagctcaggttttaacggcacctccagtgcggccaat
gggtataacataggcgctctgggtaacgccaatgctgccgcctttggggctggttccttg
ggtgccctgggagcgttcagtggagctgcaggcttgttggggttggccaacactgagaaa
cttttggatgggtccaaaaatgtggtagagttagaagtacccgaaaacttggtgggagcc
attttggggaagggaggcaaaacgctagtggagttccaggagtacagtggggctcgcatc
cagatttccaagaaaggggagttcacccctggcacaaacaacagaaaagtgactataaca
ggaacccctgctgccacccagactgcacagtacctggtcagagcacggattgcacaagag
gaagccatgagagccaagaagcagcagcagaagtag
DBGET
integrated database retrieval system
