Branchiostoma floridae (Florida lancelet): 118427207
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Entry
118427207 CDS
T01074
Name
(RefSeq) replication factor C subunit 4-like
KO
K10755
replication factor C subunit 2/4
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03030
DNA replication
bfo03410
Base excision repair
bfo03420
Nucleotide excision repair
bfo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118427207
03410 Base excision repair
118427207
03420 Nucleotide excision repair
118427207
03430 Mismatch repair
118427207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfo03032
]
118427207
03036 Chromosome and associated proteins [BR:
bfo03036
]
118427207
03400 DNA repair and recombination proteins [BR:
bfo03400
]
118427207
DNA replication proteins [BR:
bfo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
118427207
DNA Replication Termination Factors
ELG1-RFC complex
118427207
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
118427207
DNA repair and recombination proteins [BR:
bfo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
118427207
Check point factors
HRAD17(Rad24)-RFC complex
118427207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_lid_RFC1
AAA_16
AAA_assoc_2
AAA_22
AAA_11
AAA_30
DUF815
Mg_chelatase
AAA_24
AAA_14
SLFN-g3_helicase
DNAX_ATPase_lid
AAA_19
RuvB_N
AAA_5
ResIII
bpMoxR
ATPase_2
Gp44_lid
AAA_7
Motif
Other DBs
NCBI-GeneID:
118427207
NCBI-ProteinID:
XP_035692736
UniProt:
C3Z899
LinkDB
All DBs
Position
12:15539254..15552147
Genome browser
AA seq
364 aa
AA seq
DB search
MQAFLKGGSSSGLKSKKDKPLSDAKPGSSKERRQPNAPWVEKYRPRTVDDVAFQEEVVAV
LKKSLQGADLPNLLLYGPPGTGKTSTILAAARELFGADLMKQRVLELNASDERGIQVVRD
KVKTFSQLSASGTRPDGRPCPPFKIVILDEADSMTNPAQASLRRTMEKETKTTRFCLICN
YISRIIEPLASRCAKFRFKPLSSDILQKRLRHIAEAEKVNAEDKAITALIDTSEGDLRKA
ITYLQSAHRLKGEDAITEKDILEITGVIPKDMVSQLIQTCYSDSYEKLEKSVKDLKAEGY
SAEQVILQIHDEVLPREDLTDKQKSVIAEKIAVCDQRLADGGDEFLQLMDLTSVMMQQFC
HPGN
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcatttctgaaaggagggagctcttctggactgaagtcgaagaaggacaaacct
ttgtcagatgccaaaccaggatccagcaaagagagaaggcagcccaatgcaccatgggtg
gagaaataccgcccacgaaccgtagatgatgtcgctttccaggaggaagttgtcgccgtt
ctcaagaaatccctgcaaggcgctgatctccccaacctgctgttgtatggaccacctggt
acaggaaagacttctactatcctggctgctgcaagggaactctttggggcagacctgatg
aaacagagagttctggagcttaatgcctctgatgagagaggcatccaggtggttcgtgac
aaggtgaagacgttctctcaactgtcggcatcagggacaaggcctgatggccgtccgtgt
ccgccattcaaaattgtaatcctggacgaggcggactccatgacaaaccctgcacaggct
tccttaaggagaacaatggagaaggagaccaaaacaacccgcttctgtctcatctgtaac
tacatcagcagaattattgagccgctggcatccagatgtgcgaagttccggttcaagccg
ctttcgtccgacatcctccagaagagactcagacacatcgctgaggctgagaaggtcaat
gccgaggacaaggcgatcacagccctgattgacaccagtgagggggacctgaggaaagcc
atcacatacctgcagagtgctcacagactcaagggggaggacgccatcacagagaaggac
attctggaaatcactggggtcatcccaaaggacatggtctcacagctgattcagacctgc
tactcggactcatacgagaaactagagaaatctgtcaaggatttgaaagcagaaggctac
tcagcagagcaggttatcttacagatccatgatgaagtactgcccagagaagacctgaca
gacaagcagaagtcggtcattgctgaaaaaattgccgtttgcgaccagcgactggcagac
ggaggggacgaatttctgcagctcatggacctgacctctgtgatgatgcagcagttctgt
caccccggcaactga
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integrated database retrieval system
