Branchiostoma floridae (Florida lancelet): 118427242
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Entry
118427242 CDS
T01074
Name
(RefSeq) elongator complex protein 2-like
KO
K11374
elongator complex protein 2
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bfo03016
]
118427242
Transfer RNA biogenesis [BR:
bfo03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
118427242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_Gbeta
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR41
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Nbas_N
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
118427242
NCBI-ProteinID:
XP_035692790
UniProt:
A0A9J7M2B8
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Position
12:12564337..12577296
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AA seq
831 aa
AA seq
DB search
MAAHGGVETCFISAACNRSPFSLSWGRNGLILYGSGNLVAVYQPKNGEESGSVLETLSQH
TAKVTCVRWIPKGNGEPSDEFVVGSADKSASLWRRKDSKFEVVSVLRGHSAAVTITEAMY
VPTSNKDEFWTLLVTSSVDSTVRIWERRQGSDEVTCQQTVCCGNSFALDLALSTLPTTSV
PILACGWDDDRIHLWVRQGEAFREVATLKGHEDWVRGVEFTANDEGDLLLASCGQDCFIR
VWKITLQHGEEQVTEDEIKVKEKSFSIQHGDKSQSYAVVLEAVLAGHENWIYGVHWQPAV
FNDGSRHQPLSLLSASMDKTMILWKPDPTSGIWLDQDRVGEVGGNTLGFLGCQFSPDGQS
IIAHGFQGALHLWHHADLTQQASWEPGVTVGGHFDGVEDIAWDPAGGEFLLSVSLDRTTR
LFAPWRREGLKPHWYELGRPQIHGYAINCLAMVSRYQFVSGGDEKVLRVFDAPKNFLQNL
KNVARVDISKDMVERVSNVPEGASVPALGLSNKALYEGELSVAEDADREIPSSFSEQYPQ
MYYKPSELHRPPTEEHLLQNTLWPETQKLYGHGYELFCVACNRQGTLVASACKASKSEHA
AILLWDTSSWRQVGHLENHSLTVTQLRFSHSGDMLLSVSRDRTWALFRRKPAEQADGELF
RRIAYTDKKTSVHTRIIWGCSWSHDDNYFVTASRDKKVVVWGRRPDHSPAEGCLGEFCAR
STTLDVGEAATAVDFAPVLTGSKSRYCLAIGKESGTVVLYCWSPAGGKEDWTLQTTIDRS
NLGHCLAVRRLAWRPTTGNTESEERNKYLQLASCGDDFTVRIFNISVDIVT
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcacggtggagtagaaacgtgttttatctcggcggcctgtaaccgttctccg
ttcagcctgtcctggggacggaacggattgatcctgtacggcagtgggaacctggtggcc
gtgtatcaacccaagaatggagaagagtcaggatcagttctggagactctcagtcagcac
acagccaaggtcacctgtgtcaggtggatccccaagggaaatggagagccttctgatgag
tttgttgttggatcagctgataaaagtgcatcactctggagaagaaaagactcaaagttt
gaggttgtgtctgtgttgaggggacacagtgcagcagtgaccatcactgaagccatgtat
gtgccgacatctaacaaagacgagttctggacactgctggttacatcatctgtggactca
acagtcagaatatgggaaaggagacaagggagtgatgaggtgacctgccagcagaccgtg
tgttgtgggaacagttttgccctggaccttgccctgtccaccctccccaccacctctgta
cctatcctggcgtgtgggtgggatgatgacaggatacacctctgggtcaggcagggggag
gctttccgagaagtggccacccttaagggacacgaagactgggtccgaggggtggagttc
acagccaatgatgaaggtgatctgttattggccagctgtggacaggactgtttcatcaga
gtctggaagattacattacagcatggggaggaacaggttactgaggatgaaatcaaagtc
aaggagaagtcatttagcatccaacatggagacaaaagccaaagttatgctgtagtactg
gaggcagtgttggcaggacatgaaaactggatatatggagtacactggcaacctgcagtc
ttcaatgatggcagtagacaccagcccctgtccctgctctcagcctccatggacaagacc
atgatcttatggaaacctgatcccacctcagggatctggctggatcaggaccgtgttggg
gaggtcggagggaacaccctggggttcctgggctgtcagttcagcccagatggccagtct
atcatcgctcatggcttccagggggcgctccatctgtggcaccatgctgacctcacacaa
caggctagttgggagcctggtgtgacagttggaggtcactttgatggtgttgaggacata
gcctgggacccagccggtggggaattcctgctgagtgtcagcctggacaggactaccagg
ctatttgcaccttggaggagggaaggactcaagccccattggtacgagctggggaggcca
cagatccatggttacgccatcaactgtctggccatggtcagcaggtaccagtttgtatca
gggggagatgagaaggtactcagagtttttgatgctccaaagaacttcctccagaacctg
aagaatgtagcaagagtggacatctccaaggacatggttgagagggtctccaatgtccca
gaaggtgccagtgttcctgctcttgggttgtcaaacaaggcgttatatgaaggagagctg
tctgtagcagaggatgcagacagagagatccccagcagtttcagtgaacagtacccacag
atgtactacaagccttcagaactacataggccacctacagaagagcatttactacaaaac
actctctggccagagactcagaagctatatggccatgggtatgagttgttctgtgtggcc
tgcaacagacaaggaacccttgtggcttctgcttgcaaggcttctaaatcagagcatgcc
gccatcctgctgtgggacacgagcagctggagacaggtgggtcatctagagaaccactca
ctcacagtcacacagctgcgcttcagccacagtggagacatgctgctgtctgtatccagg
gacaggacctgggcactcttcaggagaaaacctgccgaacaggctgatggggaactgttc
agaagaatagcctacacagacaagaagacctctgtccacacccgtattatctggggatgt
tcctggtcccacgatgacaactattttgttacagcctctcgggacaaaaaggtggttgtg
tgggggagaagaccggaccattctccagcagaggggtgtctgggggagttctgtgctcgc
tccaccactctggatgtgggagaagcggcgactgctgtagatttcgctcctgtactgact
gggtctaaaagcaggtactgcctggccattggtaaggagtcaggtactgtggtgctgtac
tgttggagcccggctggggggaaggaagactggacactacaaacaactattgacagaagt
aacctgggtcattgtcttgctgtccgacggttggcatggcgaccgacaacagggaacacg
gagagcgaggaaaggaacaagtacctccagttagccagctgtggagacgacttcactgtg
cgaattttcaacatcagtgtagacattgtaacttaa
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