Branchiostoma floridae (Florida lancelet): 118427263
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Entry
118427263 CDS
T01074
Name
(RefSeq) protein Smaug homolog 1-like isoform X1
KO
K27396
protein Smaug
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118427263
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
118427263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
PHAT
SAM_3
Motif
Other DBs
NCBI-GeneID:
118427263
NCBI-ProteinID:
XP_035692839
UniProt:
A0A9J7N7F7
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All DBs
Position
1:6982747..7030943
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AA seq
717 aa
AA seq
DB search
MKPSSYMFRDQIQILSGWFKGWNESEQTVALLSLLKRVSGVQAKFLVLCLEQSFADSSDI
QVLQEQANNPVYLSCLSNEPKESVVSQLLSRLPLLKPGNADAKAEYMKLLPKILADSIEH
GRHLEESRQLLSYSLIHPAISNEERSSLALWLTHLEQRSSALENQQNGGTHHDSISPGDQ
TQYGYPADLSYQGNGFHGQKDFQGGRINGWRNQRDSGIVSSWQDLSGGMGGFIPGNHAPV
QKTFSGPANMNPSNNQAMGMHQRLRRSNSLTPPTSIPIQPDWAAQDDVNKSRSGSLQVDH
APLSPQSSVASSGSAGSGGDNCDEPQRNTFNEEGSGMKDVPTWLKRPWQHNYSPFFSQHE
NRLQSQDVPAWLKSLRLHKYAPLFSQLTYDEMMNLTEEQLEAQGVTKGARHKIVLSIQKL
KERQTVLQQLEKDILELGNLRSALLELKSMLITPIKPYTPLADSPSSADEGSDEKSPPPS
PAATTDGESSTVPIPEGDLPGQFTRVMGKACTQLLVSRPDDENVNLYLQLIDKTLIHEAF
TNTQKKRLLSWKQQVQKLLRNFPRRSSMDSGRQPRGWGPQHGNTFPNTYSMFGGVGSFAT
AGSVAGQRGPRPQFPRRQSYGGTKVGMMGGGPPANLRTMSNPTDGPYRKQDQMQRAHATV
QRTKSAPVRPSQPSFMFPRQDYSVAADPTEINNRLESLCLSMTEHALADGADRTSTF
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaagctcctacatgtttcgagaccaaatccagattctttcgggctggttcaag
ggctggaatgagagcgaacagacggtggccctgctctcccttctgaagagagtctcgggc
gtccaagccaagtttcttgtcttgtgcttagagcagagctttgcggattcttctgacatt
caggtcttgcaagaacaagccaacaacccagtgtacctgagctgcctgtccaatgagccc
aaggagagtgttgtctcccagttgctgtccagactgcccctgctcaagcccgggaatgcc
gacgccaaggccgaatacatgaaactgctgcccaagatactggcagactcgatcgaacat
ggacgccatttggaagagagccgacagcttctgtcgtattcgctcatccaccccgccatc
agcaacgaggagcgcagctcgctggcgctgtggctgacgcatctggagcagcggtcgtcg
gcgctcgagaaccagcagaacggcggcacccaccacgacagtatcagccccggggaccag
acccagtacggctacccagccgacctgtcctaccagggcaacggcttccacggccagaag
gacttccagggcggccggataaacggctggcgcaaccagcgggactctgggatcgtcagc
agctggcaggacctgtctggcgggatgggcgggttcataccgggcaaccacgcacctgtg
cagaaaaccttctcagggccggccaacatgaacccctccaacaaccaggccatggggatg
caccagcgcctccggaggagcaactccctgaccccgcccacctccatccccatccagccc
gactgggccgcgcaggacgacgtgaacaagagccgatcggggtcgctgcaggtggaccac
gccccgctgtccccgcagagcagcgtggcctcctcgggcagcgcgggcagcggcggagac
aactgtgacgagccgcagagaaacaccttcaacgaggagggcagtggcatgaaagatgtc
ccaacctggctgaaaaggccctggcagcacaactattcaccattcttctctcagcatgag
aatagactgcaatcacaagacgttcctgcctggctgaagagcctgcgtctgcacaagtac
gccccgctgttctctcagctgacgtacgatgagatgatgaacctgacagaggagcagctg
gaggcgcagggcgtgaccaagggggcgcggcacaagatcgtcctcagcatccagaagctg
aaggagagacagactgtcctgcagcagctggagaaggacattctggagctggggaacctg
cgcagcgctctgctggagctgaagtccatgctcatcacccccatcaagccttacaccccc
ctggcagactccccctcctctgcagacgagggcagtgacgagaagtcccccccaccctcc
ccggcggccacgacagacggggagtcgtccacagtacccatcccagagggggaccttccg
ggacagttcaccagggtcatggggaaagcttgcacacagttgctggtttcccggcctgat
gacgagaatgtcaacctgtatttgcagctcatagataaaacgttgatccatgaggcgttc
acgaacacccagaagaagagactgttgtcatggaaacagcaggtccagaagctcttgaga
aacttccccagaagaagcagcatggacagtgggagacagcccagaggttggggcccccag
cacggcaacaccttcccgaacacctacagtatgttcggaggtgtgggatccttcgcaaca
gctggttctgttgctgggcaacgaggaccacgcccgcagttccctcggcgccagagttac
gggggcaccaaggtgggcatgatgggaggcggtcccccggccaacctgagaacgatgagt
aaccccacggatgggccgtacagaaagcaggatcagatgcagagagcccatgccacagtc
cagagaacaaagtctgcccctgtcagaccatcacagccatccttcatgttccccagacaa
gactactcagtggctgcagatcccacagagatcaacaaccgcctggagtccctgtgtctg
agcatgacagaacacgcattagcagatggtgctgaccggacatctaccttctga
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