Branchiostoma floridae (Florida lancelet): 118427304
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Entry
118427304 CDS
T01074
Name
(RefSeq) zinc finger CCCH domain-containing protein 13-like isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118427304
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
118427304
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
118427304
NCBI-ProteinID:
XP_035692908
UniProt:
A0A9J7M1V5
LinkDB
All DBs
Position
12
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AA seq
1741 aa
AA seq
DB search
MSGRVKRKVTVDSSKIVAESGASSSSSQSQSQSQQPEQPSGRRPSVFERLGPGAARRERS
GERSSDPCKYWVQDGQCPFGNTCRFVHPTSQSPSGRTRSYRGSYRDRGEEVEDLRTKMRN
KRGSGGASESGSSRETRSSRKDGSQSPKQKAESSSERSRSKSKKGGERDLEGRLKAKNIS
PVVIAGPRSPESDTDQSGGEERGVDWDRPLEDDVWDDLDYEHELTLEMRRQRLQRELELM
EQREREQREEIIIQKKVGKVSPVRESSSSSSAEEVPKKKSKKGPKTPPIAEEKRKGPKTP
PEKSPARKKRGPRTPTPPPPPPPPAMPMERATSREKGREKKEGKKKKKEKASKSVTEEKP
VERESKKEHSPPPRSPEAKASPAPRTSRRSYSPPPQKRRTLSPPSKRKSPSPKPRSPSPV
KTRHQSPPSRRRSLSPAKKRRSPSPKQRRRTPSPPPRRNRSPSPPARRRSTSPPKRGRSP
PPRKRSPSPPPRRRATPSPPQRRRSPSPPRRHSPSPQRRRSPSPPPRRRQQSPPPKRRSP
SPPQKRRSVSPPQRRRSPPQPSRRRSPSPPVQRRKSLSPPQWKGRGSPPPRGRASPPPRL
RESPPPRQRSRSPDRQTGSQRYDGKYRRGQDTSVYADDRIRDRGFERDAGRRPGGYKDSL
PDRDREDDRDRPSLSRYSEGDFGGRYDRRGARPDFEHGRAGAHGFGERDARGGDREAYGE
ARKDWEARDRGSSARHEDNKDRRKAKDESRSSSPRSVSRKRKRSSSSSDEDSRDSGKGPE
PKLASKVAMVSKTSTPPRESRRSRYEETKRSPVKERSRDRSGSRVEREAHKAVREVDRGS
TQSRKSSEPSRSGSSERAGSVDSGKKKGKPPKKKKKLEQLGGRVAEDTFRRGREEHSGRT
KDERAGRTKDEHAGRMREENSGRLREEYSGKGRDDQPARGREEISGRGKEEYSGRTREEY
LGRTRDESSGRTREETLSRTREEYPARSRDEVTARQPREEEPDERKERGRAGKRSRSDSE
DSRKPETPKAKKKKVGKKRRKVSKGESDMSDQDTPKVSSREKSDSWSDEGKHSKGSVGRG
HAEEKPALPMDDVFSDWSDDDDDDMFREPGPGLRSPPDSRKDPYRPVEPPVEPPYDDYRR
RPDPDRGRAQERDRDLDRDRDARLFDLPRDDRYPPHERPDRFVPDWDRRRDDRFASRDAP
EAFLAHGRGWDPRFPRDDRFVDHRERDDRFADRYAPGRDDRWLPPDIDRDRDRFADRDAR
FPPYWDRERDARFSPWERARDERRDMLEPDRGPWGRRDRSDPALDRDMRDVRNLRAERDL
RDARSDRDIRAERDLRPERDMRGDVRSDIDIRSDRDFPSEALDREARGRQESRERPRQRS
YERLRRSRSGSHDSRSSKLSEKRTRRGRSPERKQRPRSLDRERKKQQSSDDKSTASQDTR
TEEEARTKTPEPKPTDKEEEKGAPETKSEEPVEQVQQKYEEVSSVDSSVLTEEKPSSETN
GAAAELLEEKLPSAEPEVTTTQTEEDVYEAISDDELDAMMDEEAMKEADQTDNKEEEKRE
AADVIEVDWASLMQVNKPKEPKEPGAILKKFKPGHVLARIGISPTLAGEKLMARVKEACR
AAAEEEVKEKGEAARPPSPIFDHPIGAFNFAAMRRRRQRKNLLSDVGPCRRALCARRDLE
IRKQLKKGDKVAPPVPYSTGVVDNELYKLSVQLFRRGTRNSTTSDSAEEKPVQSPVVSCP
S
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atgtccgggcgagtcaagcgaaaggtcaccgtggacagttccaagatcgtggccgagtca
ggagcgtcctcgtcaagttcgcagtcccagtcgcaatcccagcagcccgagcagcccagc
gggcgaaggcccagcgtgtttgagcggttaggcccaggtgcagccagaagagagaggtca
ggagagcgtagtagcgacccttgcaagtactgggtgcaggacgggcaatgtccgtttggt
aacacgtgtcgtttcgtgcatcccacctcccagagccccagtgggagaacccgcagctac
agaggatcttatcgagacagaggtgaggaggtggaggacctcaggaccaagatgaggaac
aaacgaggatcaggaggagcgtccgagagcggcagctcaagggagacacgcagcagtcgt
aaggacggctcccagtcacccaagcagaaagcagagtcgtccagcgagcgtagccgctcg
aagtcaaaaaagggtggcgagagagacctggagggccgcctgaaggcgaagaacatcagc
ccggtggtgatcgcgggaccgcgcagccctgagagcgacacggaccagtcggggggtgag
gagaggggggtagattgggacagaccactggaggatgatgtctgggacgacctggattac
gaacatgagttgacgttggagatgcggcggcagcggctgcagcgagagttggaactgatg
gaacaacgagagcgcgagcaacgcgaagagatcatcatacagaagaaggtaggaaaggtc
tctcctgtgcgagagagctcatcttcctcatctgccgaagaagtgccaaagaagaaaagc
aagaaggggcccaagactcctcctatagcagaggaaaagcggaaaggtccaaaaactccg
cccgagaagagcccggctcggaagaagaggggccctcggaccccgacccccccaccacct
cccccaccccccgcaatgccgatggaacgggcaacgtctcgtgaaaaggggcgggagaaa
aaggaaggcaagaagaagaaaaaggaaaaggccagcaagagtgtgacggaggagaaacca
gtcgagcgcgaaagcaagaaagagcattcccctccgccacggagtccagaggcaaaggcc
tctcctgccccaagaacttcccgtagatcttactctcctccccctcagaagcgaagaact
ctatctcctccctccaagaggaagagtccatcaccaaaaccgagaagcccatccccggtg
aaaactcgacaccaatccccaccttccagacgccggtctctctcccctgcgaagaagcgc
cgcagcccctcgccaaaacagcggcgtagaaccccctctcccccgccaaggcgtaaccga
tctccttcgccacctgcacgccgtaggtcaacctcgccgcccaagaggggacggtcccca
ccccccagaaagaggtccccctcccccccaccaagacgacgtgcaacgccctctcctccc
cagaggcgcagatccccctcccctcctcggagacactccccctccccccaaagacgtcga
tctccgtccccgccacccagaagacggcaacaatccccaccccccaagagacgctccccc
tccccaccccagaagaggcgatcagtatcaccgccacagagacgacgttcaccaccccaa
ccatcccgtcgccgatccccttcacccccagtacagcgcaggaagtcactgtctcctcca
caatggaagggtcgtggatctccccctccgagaggacgagcctccccccctcccaggctt
agagaatcacccccacccaggcagaggtctcggtcgccagataggcagactggatcacag
agatatgacggtaaatatcggagaggacaagacaccagtgtttatgcagatgacagaatc
cgagacaggggctttgagagagatgcaggcagaaggcccggaggctacaaggacagcctg
cccgaccgggatcgtgaggatgacagggaccgcccctccctgagcaggtacagcgagggc
gactttggtggcaggtatgacaggcgcggggctcggcctgactttgagcatggcagggct
ggcgcgcacggctttggcgagagggatgcacgcggcggggatcgagaggcttatggggaa
gctcgcaaggattgggaggcgagggatcggggaagctctgcacggcatgaggacaataag
gacagaaggaaggctaaagacgaaagtcgatcatcgtcgccacgttctgtctcccgcaag
aggaagcgctcctcctccagcagtgatgaagatagccgtgacagtggcaaaggtcccgag
cccaagctggccagcaaagtggccatggtgtcaaagactagcactcctccgcgtgagagc
aggcgctctcgctacgaagagacaaaacgatctcccgtcaaggaaagatcccgggacaga
agtggctcaagggtggagagggaggcccacaaagcggtgcgagaagttgatcgtggaagc
acccagtcgcgaaagtcctccgaaccttcacggtcggggtcgtcggaacgtgccggaagt
gtggactcgggaaagaaaaaagggaagccacccaagaagaagaaaaagctggaacagctc
ggagggagagttgcggaagacacattcaggaggggtagagaagagcactcgggcaggact
aaggacgagcgtgccggtagaactaaagacgagcatgctgggagaatgagagaggagaat
tctgggagacttagggaagagtattctgggaagggtagagatgatcaacctgcaagaggt
agagaagaaatttctgggcgaggaaaggaagaatattctggaaggacaagagaggaatat
cttggaaggactagagatgaatcctcgggtaggacaagggaggaaaccctttctaggaca
cgagaggagtaccctgcaagatccagagatgaggtcactgcgagacaaccaagggaagag
gagccagacgaacggaaggaaagagggagagctggaaagagatctcgctcagatagtgag
gactcgaggaaaccagagacccccaaggcgaaaaagaaaaaggtggggaaaaagaggaga
aaggtatccaaaggggagtcggacatgtctgatcaagacaccccaaaggtctcatcccgg
gaaaagtcggacagttggtctgatgaaggaaagcacagcaaaggcagtgttggaagagga
cacgcagaggagaagcctgcactcccgatggatgatgttttctcagactggagcgatgac
gatgatgatgacatgttcagagagccaggccctgggctgaggagcccaccagactcgagg
aaagacccgtacaggcctgtggagccaccggtggaaccaccctacgatgactaccggaga
cgcccagaccccgataggggacgagcccaggaacgggacagagacctcgacagggacaga
gatgcgagactctttgacttgccgcgcgacgaccgctaccctcctcacgagagaccggat
cgatttgtccccgattgggatcgcaggagggacgaccgctttgcaagcagagacgccccc
gaggcgttcctggcccacggcaggggttgggatcctcggtttccccgggacgatcggttt
gtggaccatcgcgagagggacgacagatttgcggatcgctatgccccaggcagggatgac
agatggcttccaccggatattgacagggatcgggacagattcgccgatcgtgatgcccgg
tttccgccgtactgggacagagaaagggacgcacgcttctccccgtgggagagggcacga
gacgaacgtagagacatgttggagccggatagaggaccctggggcagaagggatcgcagt
gatcccgctctggacagagacatgcgtgatgtgaggaacctgcgggctgaaagagacttg
cgcgatgcacgctcggaccgcgacatccgagccgaacgtgaccttcgtcctgaaagggac
atgcgcggagatgttcgatcggacatagacatcagatctgacagagacttcccctcagaa
gctctagatcgggaggcgaggggtcggcaggagtcgcgagagcgaccccgtcagcggtcg
tacgagagactgagacgctcgcgtagcggtagccacgacagccgctccagcaaactgtct
gaaaagcgtacacgtaggggccgcagcccagagcgcaagcagcgcccacgctccttggac
agggagagaaagaagcagcaaagcagcgacgacaagagcaccgcatcccaggacactcgc
acagaggaggaagcccgcaccaaaacccccgaaccaaagccaaccgacaaagaggaggaa
aagggagcgcccgaaaccaaatcagaggagcccgtagaacaagtgcagcagaagtacgaa
gaagtgtcgtccgttgactcttccgttctcaccgaagagaaaccctccagtgagaccaat
ggagctgctgcagaattgctggaggagaaactgccctctgccgaaccagaggtcaccaca
acccagaccgaggaggacgtctacgaagcgatcagtgacgacgaactggacgccatgatg
gacgaggaggccatgaaggaggctgaccagactgacaacaaggaggaggaaaaacgagaa
gcagcggatgtgatagaggtggactgggccagcctcatgcaggtcaacaaaccaaaggag
cccaaggagccgggagccattctgaagaagttcaagccaggccacgtgctggctcggatc
ggaatctcccctactctggctggggagaaactcatggctcgagtcaaggaggcttgtagg
gcagcagcagaagaggaggtcaaggaaaaaggagaggctgcaaggccacctagccccatc
tttgaccacccgatcggagcgttcaactttgctgccatgaggaggcgccgacagcgtaag
aacctgcttagtgatgtggggccttgccgccgtgcgctctgtgccagaagggacctggag
attagaaagcagctcaagaagggagacaaggttgccccaccagttccctactccactggt
gtggtagacaacgagctgtacaaactgagcgtgcagcttttccgccgtggcaccaggaac
agcacaacttctgacagtgctgaggagaaacccgtgcagtccccggtcgtttcctgcccc
tcgtaa
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integrated database retrieval system
