Branchiostoma floridae (Florida lancelet): 118427310
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Entry
118427310 CDS
T01074
Name
(RefSeq) lysosome-associated membrane glycoprotein 1-like
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03272
Virion - Hepatitis viruses
bfo03273
Virion - Lassa virus and SFTS virus
bfo04140
Autophagy - animal
bfo04142
Lysosome
bfo04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
118427310
03272 Virion - Hepatitis viruses
118427310
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118427310
04142 Lysosome
118427310
04140 Autophagy - animal
118427310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118427310
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bfo04147
]
118427310
04090 CD molecules [BR:
bfo04090
]
118427310
Membrane trafficking [BR:
bfo04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
118427310
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
118427310
Other autophagy associated proteins
RNautophagy/DNautophagy
118427310
Exosome [BR:
bfo04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
118427310
CD molecules [BR:
bfo04090
]
Proteins
118427310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
VAS1_LD
Lamp2_2nd
Motif
Other DBs
NCBI-GeneID:
118427310
NCBI-ProteinID:
XP_035692931
UniProt:
A0A9J7N657
LinkDB
All DBs
Position
12:7551608..7559744
Genome browser
AA seq
642 aa
AA seq
DB search
MAWLSCLTILVLSSVVKCQEWDPTAPPVGHFTVSDAQNNTCLLMTVGMTFHVPYVKNDSN
NTEAVASYPLPANADVTGTCKDTAASITLSWGDGFNVTVKFERNDTVFYASEIITGYVLN
HDIFPDCNDDGETRVQSGPPHDIHAMPGRSYLCDVAVNVTVGNVSVTFSDLQVQPFLVKG
GNFSKVEECAADMSTTTPSAHTIPVKTTAHPGPIPVPKPTQNNYTLTDSRGNVCFMALMA
AQIQVNYTRTTGKTALAVWNVPKNTAASGTCGNDTASLQLMLDGGLTNLTIVFVSTKGLD
DLAGVDTDSGFKASEMILEYMETEARFPDSVNNGTSQTVERKNLTAFPGSTGMSYKCNSR
QAVELNDDVTLRFEEVQLQPFQVKGGHFDPVEECAADKQTTPEPTNTTTLMTTMATVPTP
RPVHDPSILNFTLTDDDDKICFMALMGLQIEVNYTTQHKEKATARWNVPKGKSVNVTGEC
SNTTTTLTLIFDGGLSVVTMTFKNQSGKGGTVNKFMVSDINFRYVKDKAHFPDVQPAELD
VPVNVSKHNLTVFKGELGFSYRCNVGANITLNQNVTLRAINVHVEPFGLKNSKFDQAEVC
EADNKVTTLRPIIVGCAIAGIDVLMLLYYGIGRRMRRNKDTR
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggctgtcctgcctaaccatacttgtcttatcgtccgttgtgaaatgccaggag
tgggacccaactgcgccccctgtcggccacttcacagtatctgacgctcagaacaacacc
tgcctcctcatgactgtcggcatgacgttccacgtgccgtatgtaaagaacgacagcaac
aacactgaggcagttgccagttaccccctaccagccaacgctgacgtcacgggtacatgt
aaggacaccgcagcgtccatcacgttatcctggggagacggcttcaacgtcaccgtcaag
tttgaacgtaacgacacggtgttctacgcctcagagatcatcaccggttatgtgctgaac
catgacatatttccggactgcaatgacgatggagagacgagagtccagagcggccctcct
cacgacatccacgccatgcccggccggtcctacctgtgcgacgtcgccgtaaacgtaacc
gtggggaacgtttctgtaacgttctcagacctacaggtgcaacccttcctggtcaaggga
ggcaattttagtaaagtggaggagtgtgcggcggacatgtccaccaccacacccagcgct
cacaccattcccgtaaaaacgaccgcgcaccccggccccattcccgtgccgaaacccacc
cagaacaactacaccctgacggacagcaggggtaatgtgtgcttcatggcgctcatggcg
gctcagatacaagtcaactataccaggacaactggcaagaccgctctagccgtttggaac
gtaccaaagaacactgcggcgagtgggacatgtgggaacgacacagcgtccctacagctg
atgttggatggaggactgaccaacctcaccatcgtcttcgtgtctacgaaaggcctagac
gaccttgcgggcgttgacacagacagcggttttaaggcgtctgagatgattttggaatac
atggaaaccgaggctcgcttccctgacagtgtcaataacggaacgagccaaaccgtcgag
aggaaaaacctgacggcattccccggctctacgggaatgtcgtacaagtgtaactcccga
caagccgtggagctgaacgatgacgtcacactcaggtttgaagaagtccaacttcagccg
tttcaggtgaagggcggccattttgaccctgtcgaggagtgtgcggcagacaagcagacc
accccagagcctaccaacaccacaacactcatgactaccatggcaaccgttcccacgcca
cgcccagttcatgaccccagcattttgaacttcacgctcacggacgatgacgacaaaatc
tgcttcatggcgctcatgggtctgcagatagaggtcaattacaccacacagcacaaggag
aaagctacggcccgttggaatgtacccaagggcaagagcgtcaatgtcactggagagtgt
tccaacaccacaactaccttgaccttgatcttcgacggcggactctctgtcgtgacaatg
accttcaagaaccagagtgggaagggcggtacggtgaacaagttcatggtttctgacatc
aactttcgttacgtgaaggacaaggctcactttcctgatgtccaacctgcagaactagat
gtacctgttaacgtctcgaaacacaacttgacggtcttcaagggggaactgggattctcc
taccggtgcaacgtcggcgcaaacatcactctgaaccaaaacgtcactttgagagccatc
aacgtccacgtggaaccgttcgggctgaaaaacagcaagtttgatcaagctgaagtgtgt
gaagctgataataaagtcaccacccttcgtccaatcatcgtcggctgcgcgatcgcaggg
atagacgtgttgatgctgttgtattatgggataggtcgccgcatgcgaaggaacaaggat
actcgatag
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integrated database retrieval system
