Branchiostoma floridae (Florida lancelet): 118427367
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Entry
118427367 CDS
T01074
Name
(RefSeq) remodeling and spacing factor 1-like isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118427367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bfo03036
]
118427367
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
118427367
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
WSD
DDT
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
118427367
NCBI-ProteinID:
XP_035693015
UniProt:
A0A9J7M2R3
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All DBs
Position
12:complement(11432293..11447934)
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AA seq
1423 aa
AA seq
DB search
MSGPEKGVDTDPDYAVVCGFLRRYGEALGLPPMSYAELQRALEDTTRLNPDLILMQVKLM
RKIGKSVSSDKWERYLVKMCRQFSQIAAWEMEQGGYQEVDPNIKLKLLKYLCERQFDDNL
KFRAEVLNKEEADEMREKPLGRDKNGMLYWYMQDADTNLHLYREEPDDQYNSTWQVVCRT
RDELEGLIAELEGGGKDTPENEEEDDKSSSADQASLAGKIKDKCTNGQYDEDKENKEQPQ
TDAKPGKENQIQEDKEDTKTDDKTKKESQTKESKEDLKKTASDDKPSSKEDTEKPITSQH
VSVIVKREITPEPVVKEEPVKSSPKENDSLPQNEDDSTKKESVIVKNEVGAETSANSATS
SNQPEAKEEKGETSKGGSKQQESPPSKPVSHVHKGIHSIENILRDVPIKCERDAITEPPC
VVSATMDPTVGLQTFANGRLHYCMGEGSSMDSVPGNMGSQDEGKERRNPTEGGGTAKEDN
KGPESRETAAAVEEAKNKVREILSKNTLNNSSSNTDSAGGRTANDKEGQRSEGDDTGNKI
PDSGKEMKTTSEREQVSTNRVSDDTQDRHESKKTESRSTIEPEQSKVKEKEKEEKEEEGE
KAKNSGANTTSQSESTGKKSKEPKAAEEGVAKYGERSPKPGKESEKSDEKEEEDPGNKNV
DSCTNKDKPGNESKEPDITTEDTVKESKESDKKTESTEEKSDHPEKDTEDDQKEETTEKV
TLETSEETTKPQRGRKRGRRGRRSLKETFKKQVKEKDEDVEGKEEEGEDLDDSRSVSKDS
ESSKEAVSAPIRRSTRARKAVTQVYTPEVKKKPVTYPKEPSEPSLPPSPEPVKKKTREKK
GRGKRRGRRRKDSTSEESSGDEEEDSSEEEEEEEESEYPTEDDSPCSKCGMYNHPEWILL
CDKCDSGYHTACLRPPLMMIPDGDWFCPSCEHVQLVSKLREALAEVDQELKKKQRAERRK
ERLTYVGISLENVIPEPDRESEMVGDDDEERSRPRHQHKKKKKQHHHHRHRHYYDDEKPV
KTIAERRTSRRTRKDISYRFDDFDEVINEAIQEDIKASEGAGGYGGKDIENIIAAEGGAG
GYGGKDIENIIAAEGGVVKKEGPKKGRRRRLMDLDADSEEEVGSEEEYNMSEGSEQSEAE
EEPSEPSEPSLSESDDSLAQRTRRRFRGRRSSKATRRSSRLRSGCKRRYWDSDEEDEDIE
DEHSSVSSENIPRWSGVRTYSARRQKVCYKESSSSEEEQEKTKRELPDLEWEPEAAKEEG
SPRRKRPRLETSSESESSSEDTREEPRKPARRQLDTSESDEEEEEEEEKEEVKEEEKDDQ
ESKDESKEEDSNKKELSENVQEEKDNKEDTSTEGNKMGVSFQLPKVSKSLENSPTTDTLP
LPAQMTQNGTHDSSGRSSRQSGEDEDELLANVMDLVAYVTEDD
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcccggagaaaggagtggatacggatcccgactatgcggtggtttgtggcttc
ctccgccgctacggagaggcgctgggcctgccgcccatgtcctatgccgagctgcagaga
gccttggaagacaccaccaggctgaacccagacttgatcctgatgcaggtcaagttgatg
cggaagatcgggaagagcgtttcctcggacaagtgggagaggtacctcgttaagatgtgc
cgccagttctcccagattgcagcatgggagatggagcagggtgggtaccaggaggtggat
cccaacatcaagctcaaacttctcaagtacctgtgcgagcgccagtttgacgacaacctg
aagttccgtgccgaggtgttgaacaaggaagaagcggatgaaatgcgcgagaaaccgctt
ggccgagacaaaaacggcatgttatactggtacatgcaggatgccgacacaaacttgcac
ctgtaccgagaggagcctgacgaccagtacaactccacctggcaggtggtctgcagaact
cgtgatgagttggaaggtctcattgcggagctggaggggggaggcaaggacactcctgag
aatgaggaggaagacgataagtcgtcgtccgctgaccaggccagtctggccggtaagatt
aaggacaaatgtaccaatggtcagtatgatgaggataaagaaaacaaggagcagccccaa
acagatgccaaaccaggaaaggagaaccaaatacaggaggataaagaagacacaaaaaca
gacgacaagacgaaaaaggagagtcaaacaaaggaaagcaaagaagacttgaagaaaact
gcctcagacgacaagccaagtagtaaggaggacacagaaaagcccatcacttcccaacat
gttagtgtcatcgtgaaaagagaaatcaccccagaacctgtcgtgaaggaagaacctgta
aaatcctccccaaaagaaaatgattctttgcctcaaaacgaggatgactcaacgaaaaaa
gagagtgttatcgtgaagaacgaagtaggtgcggaaacgagtgccaatagcgcaacatct
tccaaccaaccagaggccaaagaggagaaaggggaaacgagcaaaggtggcagcaaacaa
caggaatcgcctccgtcaaaaccggttagccacgtgcacaagggaatccactctatcgag
aacatcttgcgcgacgttcccatcaagtgtgaaagagacgctatcacggaaccgccgtgt
gtcgtaagcgcgaccatggaccctaccgtaggactgcagacttttgcgaacggaaggtta
cactattgtatgggggagggcagcagcatggacagtgtaccaggaaacatgggtagtcag
gatgaagggaaggaaagaaggaaccctacagaaggtggcggtacagccaaagaagacaac
aaaggtcctgaaagtagagaaacagcagcagcagttgaagaagctaagaataaagtaaga
gaaatactgtccaagaacactttaaacaattcaagcagcaatactgattcagcaggaggg
aggacagccaatgacaaggagggtcaaaggtcagaaggtgatgacactgggaacaagatt
cctgattccgggaaggagatgaagactactagtgagagggagcaggtctccaccaatcgt
gtctcagatgacactcaggacagacatgagagtaaaaaaactgagtcaaggtcaacgatt
gaacctgaacagagcaaggtcaaagaaaaagaaaaggaggaaaaagaagaagaaggagaa
aaagccaaaaattctggagcaaacactacatctcagagtgagagcactgggaaaaagagt
aaagaacctaaggcagctgaggagggtgtagccaaatatggtgaaaggagtccaaaacct
gggaaggagagtgagaaatctgacgaaaaagaagaagaggaccctgggaacaagaatgtg
gattcttgtacaaataaggataaaccggggaacgagagcaaagaacctgacattactact
gaggacactgttaaggagagcaaagaatcagacaagaaaactgagagcactgaagagaag
agcgaccaccctgaaaaagacacagaagacgaccagaaggaagagaccactgaaaaagtt
accctagaaacttctgaagaaaccacaaaaccacagaggggcaggaaaagaggaagaagg
ggtaggaggagtcttaaagaaactttcaagaaacaagtgaaggagaaagatgaggatgtg
gaagggaaggaagaggagggtgaagatctggatgacagtagaagtgtgagtaaagactca
gagagcagtaaggaggcagtcagtgcccccatcaggagaagtaccagggccaggaaagct
gtgactcaagtctacacacctgaagttaagaagaaacctgtgacctacccaaaagagcca
tcggagccatccctacccccctccccagaaccggtcaagaagaagaccagagagaagaag
gggcgtggcaagaggaggggtcgtcgtaggaaggacagcacgagtgaagagtcatcaggg
gatgaagaagaagatagttcagaggaggaggaggaggaggaggagagtgaataccctact
gaagatgactccccctgcagtaaatgtggcatgtacaatcatcctgaatggatcctcctg
tgtgataagtgtgacagtggttatcacacggcatgtttgcggccccctctgatgatgatc
ccagatggagactggttctgtcccagctgtgaacatgtgcagctggtgagtaaactgaga
gaagccttagcagaagtggaccaggagctcaagaagaaacaacgggcagagcgaaggaag
gagagattgacgtacgtcgggatcagcctggaaaatgtcattcctgagcctgatcgtgag
tctgagatggtaggtgacgatgatgaagaacgcagcagaccccgccaccagcacaagaag
aagaagaagcagcatcaccaccaccgtcatcggcattattacgatgacgagaaacccgtc
aagacaatcgcggagagacgcacgtcgcggcgtacaagaaaggacatctcgtacaggttt
gatgacttcgatgaggtcatcaatgaagccattcaggaggatattaaagcatcagaaggt
gcagggggatatggtgggaaggacatagagaacatcattgctgcagagggaggtgcagga
ggctatggtgggaaggacattgagaacatcatcgctgcggagggcggtgtagtgaaaaag
gaggggccaaagaagggtcgccggcgtcggctcatggacctggatgctgacagtgaagag
gaagtggggagtgaggaagagtacaacatgagcgaaggaagtgagcagagtgaagcagag
gaggagcccagtgagcccagcgagcccagcctgagtgagagtgatgactccctggcacag
cggaccaggaggaggtttcgggggcgccgctcctccaaggccacccgaaggagttcccgg
ctcaggtccggttgcaaacggcggtactgggactccgacgaggaagatgaagacatcgaa
gacgaacattccagtgtgagtagtgagaacattcccaggtggtcaggtgtgaggacgtac
tctgctcgccgacagaaggtctgctacaaggagtcctccagcagtgaggaggaacaggag
aagacaaaaagagagctgccagacttggagtgggagccagaggctgcaaaagaggagggt
tcacccagaagaaaacggccgcgcttggagaccagcagtgaaagtgagtccagctcagag
gacaccagggaggaaccgaggaaacccgccagacgacagctcgatacttctgaatctgat
gaagaagaggaggaagaagaagaaaaagaagaagtcaaagaagaagaaaaagatgaccag
gaatcaaaagacgaaagtaaggaggaagattccaataagaaagaactgtctgaaaatgtc
caagaagaaaaggacaacaaagaagacacatcgacagaagggaacaagatgggagtgtcg
tttcagcttcccaaagtctctaaatccctggagaattctccaacgacggacacactgcct
cttcccgcgcagatgacacaaaacggtacccatgattcttcaggacggagtagtcggcaa
tcgggagaagacgaagacgaactattggccaatgtcatggacttggtcgcgtatgtcaca
gaagacgactga
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