Branchiostoma floridae (Florida lancelet): 118427381
Help
Entry
118427381 CDS
T01074
Name
(RefSeq) autophagy-related protein 16-1-like isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04136
Autophagy - other
bfo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118427381
04136 Autophagy - other
118427381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118427381
03029 Mitochondrial biogenesis [BR:
bfo03029
]
118427381
Membrane trafficking [BR:
bfo04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
118427381
Others
Specific organelles associated proteins
Auto phagosome
118427381
Mitochondrial biogenesis [BR:
bfo03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
118427381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_WDR75_1st
ANAPC4_WD40
eIF2A
Beta-prop_IFT122_1st
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_SCAP
Beta-prop_WDR19_1st
Cytochrom_D1
CC4_CEP85
Beta-prop_SPT8
Fez1
Motif
Other DBs
NCBI-GeneID:
118427381
NCBI-ProteinID:
XP_035693041
UniProt:
A0A9J7M1K0
LinkDB
All DBs
Position
12:complement(9606675..9621119)
Genome browser
AA seq
637 aa
AA seq
DB search
MAASGSEEGGWKQTLLLRLRDRNRVQTHFFADVIQAHNKLFESADTLKSQNVQLQLQTER
LKQDKLDLEVKVLDSSANSGTGKGEKTQALEQKLFKLQEELTELHRRKGENAQQIIDLNS
ALQEKEKVLSEKENRLLDTETHLEALKAECRNLEQAILEKDALHQALRDEHQALQMTFSA
LEDKLRKTQAENQDLVERWLQQKSRDADKMNFENDQMARKRQAKLQRELAEAAKEPSPPL
MDKPGSRKKVHFRKKSESGPRSPENGQPDPMVPPGSPITKMFNSSTSEAPVNPGHVGFIE
SIAGLLAGKKRSSSHDDGFEPQTSAAGAPPRHYVTVTLPSTAIHKADGHDGEVNAVRFSP
SGRIVATGGTDRKLKLWEIMNRKLDSKAVLTGSNAGIMSVEFDPQENYILGASNDFASRV
WSVADYRLRHTLTGHSGRVMAAKFLGDSSRVVSGSHDRTLKIWDLRSRACIRTIFAGSSC
NDLVTSDLSGTNIISGHFDKRIRFWDTRAESSANEITLQGKITSLDLSLDNKYLLSCSRD
DSLKLIDLRMNQVTGTFCADGFKVGCDWTRTIFSPDAQYVVAGSSDCSIFIWNITTFRLE
KTLKEHNSSVIACSWHPSGMMMVSCDKNKKVTLWSDM
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggccgccagcgggtctgaggaaggaggttggaaacaaacacttttactccgtctccga
gacagaaacagggtacagacacacttcttcgcagacgtcatacaggcccataacaagttg
tttgagagtgcagacaccctgaagtctcagaatgtccagctacaactgcaaacagagaga
ctgaaacaagacaaactagacctggaagtgaaagtcttagattcaagtgcaaattcagga
actggcaaaggagagaagacccaagcactggaacagaagctcttcaaactacaggaagaa
ctcactgagctacacagaagaaaaggagaaaatgcccagcagatcatcgacctgaacagt
gctctacaggagaaggagaaggtcctgtctgagaaggagaacagactgctggacacagaa
actcacctggaggctctgaaagctgaatgtcgaaacctggagcaggctattctggagaag
gatgctctgcaccaggcattacgagacgagcaccaggccttacagatgaccttcagtgcc
cttgaggacaagttgcggaagacgcaggccgagaaccaggacctcgtcgagagatggctg
cagcagaagtctagagacgccgacaaaatgaactttgaaaacgaccaaatggccagaaaa
agacaagccaaacttcagagagaattagcagaggctgccaaggaacccagccctccccta
atggacaagcctgggtctaggaagaaagttcactttcggaaaaaatcggaatctggaccg
aggtctccagagaatggtcaaccagacccgatggtaccccctggctcaccaataaccaag
atgttcaactcgtccacatcggaggcccctgttaaccctggacatgttggctttattgaa
tccattgcaggattactggccggtaaaaaaaggtcgtcttcacatgatgacggtttcgaa
ccccagacctctgctgcaggtgcaccgccccggcactatgtcacagtcactcttccttca
acagctattcacaaggcagatggccatgatggagaagtcaatgctgtccgcttcagccct
tcagggagaatagtagccacaggagggacggacaggaaactcaaactgtgggaaatcatg
aaccgtaaacttgactccaaagctgtcctaactggaagcaatgctggaatcatgtcagtg
gagtttgatccacaggagaactacattttgggagcttctaatgactttgctagtagggtt
tggagtgtagctgattacagactaagacacaccctgacaggtcacagtgggagagtcatg
gcagccaagttcctgggagactccagcagagtggtgtccggcagccatgacaggacactc
aagatctgggacctcaggagcagggcatgtatccgaaccatttttgctggttccagctgt
aatgacctcgtgacctctgacctctcgggcacaaacattatcagtggccattttgacaag
aggataagattttgggacaccagagcagaatccagtgccaatgagatcacactacaggga
aaaatcacttctctggatctatcactagacaataaatacctgctgagctgctcgagagac
gactccctgaagctgatagacctgagaatgaatcaagtgacggggacattctgtgctgat
gggttcaaagttggctgtgattggacgagaacaatattcagtcctgatgcccagtatgtt
gtagcagggtcgtcagattgtagtattttcatctggaacatcacaaccttcagattagag
aaaacactaaaggaacacaattcttcagtgatagcgtgttcctggcaccccagtgggatg
atgatggtcagctgtgacaagaacaaaaaggtgacgctgtggtcggacatgtga
DBGET
integrated database retrieval system
