Branchiostoma floridae (Florida lancelet): 118427405
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Entry
118427405 CDS
T01074
Name
(RefSeq) cyclic nucleotide-gated channel rod photoreceptor subunit alpha-like
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bfo04040
]
118427405
Ion channels [BR:
bfo04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
118427405
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
CENP-F_leu_zip
KxDL
FAM76
Motif
Other DBs
NCBI-GeneID:
118427405
NCBI-ProteinID:
XP_035693084
UniProt:
A0A9J7M2P6
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Position
1:17648375..17656706
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AA seq
785 aa
AA seq
DB search
MNTYSAEPDDPFLMRRVSLRLDALREEGGTDSDTSGDSDGEDNDLDGVLDPEGESVYIWM
GVVSCCVLYNTWVIILRTSFQQMRSESYLSSYFDVLDVVVDLVYLADIAVHFRTGYLDDG
ILVTDLASLSRHYRSQGEFRRDIVSMLPVKLLTLLLPVGEGTFPILRLPRLLKWGTVLDF
FQLTDSRTSRPNIVRAMVLILYLASFIHWIACLYYMLSEYEGLGTNEWVYPGDEEEQPFI
RKYIRCMYWSIMTLTTIGENPPPRTNLEYIFTGLTFLIGVFLFATVVGNVGDVISNLRHA
RTEFQARLDRVKMYLSHHSVPDVLQKRVKKWADYSWNRTQAMDDSTFLEMLPRRLRKEIA
VSVHLDTLRKVKIFEDCENGLLCDLALKLRSQVYTPGDYVCKSGEIGREMYIISHGKLKV
YIQDSDVDQPLEVATLKEGNYFGEISLLKLDDGCNRRSADVVSVGYSELLCLSKKDLIHA
LVEYPEARKVLEDQGRDRMEAMRESRMQRRKSDASSQSDSSGLKSRFPTRRTTSLPTKPS
SGANKSDDITEILLQLKTLDSQVTKERIERLSWKMAKLTEMLNERNEQLQATTRRIGELE
RMLQGGKKKRRRSSLTTLTSRDLNTLLSPEYPRGYRDQSRRSTRRNDAAAALRVDNLRRR
FSTHSLLPVDSDDITGQQKGLGSGRCQSNPTENVTSDDSRTIPEISINGVLHQEWCVSPR
GVGSSFGDDEEDISRLSVSSGSSHDLARRAFCRTASYSSDFSSSMFSDSLYSDTCYDTDY
SFYRD
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgaatacatacagtgctgagccggacgatccgttcttgatgagaagggtgagtctgcgg
ctggacgcactgcgggaggaggggggcacggactcagacacaagcggggacagtgacgga
gaggataatgacttagacggagtcctggatccagagggagaaagtgtctacatttggatg
ggggttgtctcctgttgtgtcttgtataacacctgggtcatcatcctgagaacgtctttt
cagcagatgagatctgagagttatttgtcatcctactttgacgtgctggacgtggtggtg
gacttggtgtacctggccgacatcgctgtacatttccgcaccgggtacctggacgacgga
atcttggtgacagacctggccagcttgagccgtcactaccgcagccaaggggagtttcga
cgggacatagtctccatgcttcccgtcaagctgctcaccttactcttaccagttggtgaa
ggtaccttccccattctgaggctacctcgtctgttgaagtgggggacagttctggacttc
ttccagcttacagacagccgcaccagccggcccaacatcgtgagggccatggtgctgatc
ctgtacctggcatcgttcatccactggatcgcctgtttgtactacatgctgtcggagtac
gaaggcctgggcacaaacgagtgggtgtatcctggagacgaagaggagcagcctttcatc
aggaaatacatccgctgtatgtactggtctatcatgaccttgactaccattggcgagaac
cctccaccccggacaaacctggagtacatcttcacgggactgacgttcctgatcggcgtg
tttctcttcgccactgtggtgggtaacgtgggtgacgttatcagtaacctacgtcacgca
aggacggaattccaggccaggttagacagggtaaagatgtatctgagccaccacagtgtc
ccggatgtgctacaaaaacgtgtgaagaaatgggcggactactcttggaacaggacacag
gcgatggatgattccacgtttttggagatgttgccaaggcgcctgcgcaaagagattgcc
gtgagtgtccacttggacaccctgaggaaggtcaagatatttgaggattgtgagaatggc
ttgttgtgcgatctcgctttaaaactgcgatcccaggtctacacgccaggggactacgtg
tgtaagagtggagagattgggagggagatgtacatcataagtcatgggaaactcaaggtt
tacattcaagactctgacgtggaccagccgctagaggtcgccacactgaaagaggggaac
tactttggagagatcagccttctgaagctggacgatgggtgtaaccgtcgcagtgctgac
gtcgtgtctgtcggctactcagaactcctctgtctgtcaaagaaagatcttatccacgct
ctggtggagtacccagaagcgagaaaagtgctagaggaccaaggacgggaccgaatggaa
gctatgagagaatctagaatgcagagacgaaagtcggacgccagctcacagtctgacagc
agcggtctgaagtccaggttcccgacacgtcggacaacgtccctaccaacaaaaccctcc
agcggcgccaacaaaagtgatgacatcacggagatcctactgcagctgaagacgctggac
agtcaggttactaaggagaggattgaacggctttcatggaagatggcaaaactaacagag
atgctgaacgaacgaaatgagcagctacaggccaccaccaggcggataggcgagctggag
cgaatgctgcagggcggcaagaaaaagcggcgccggtcgtcccttaccaccctgaccagc
agagacttgaacactctgctctcccccgaatacccgcggggatatcgtgatcagtcccgt
cggtcaacacggcgaaatgacgcagcagcggcgttaagggtggacaatctgcgcaggcgt
ttcagtacacatagtttactgccagtagacagtgacgacatcaccggtcagcagaaaggc
ctaggcagtgggaggtgtcagagcaatccgacagagaacgtcacttccgacgacagcaga
accataccggagatcagcattaatggcgtcctacatcaggagtggtgcgtgtccccgagg
ggggtggggtcgtccttcggggatgacgaggaagacatcagtcggctgagtgtctccagc
ggtagcagccatgacctagcccggcgggcgttctgcaggaccgctagctacagcagtgac
ttctccagcagcatgttcagcgactcgctctacagcgacacttgctatgacacagactat
tccttctacagggactaa
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