Branchiostoma floridae (Florida lancelet): 118427407
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Entry
118427407 CDS
T01074
Name
(RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit delta-like isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03015
mRNA surveillance pathway
bfo04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118427407
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
118427407
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bfo01009
]
118427407
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118427407
03036 Chromosome and associated proteins [BR:
bfo03036
]
118427407
Protein phosphatases and associated proteins [BR:
bfo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
118427407
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
118427407
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
118427407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
P2R3B_EF-hand
EF-hand_7
EF-hand_5
EF-hand_1
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
118427407
NCBI-ProteinID:
XP_035693081
UniProt:
A0A9J7N6A9
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Position
12:complement(15287105..15303821)
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AA seq
593 aa
AA seq
DB search
MTTLCAVPCQFLGLKIPIYHSVLVDQRCSRAIHHCDVCNVVQRLESGAAIVCKSIHYGVC
QPVAIPPTKARIIKKREEKATAKVSPHSPPAKPQLSPQPKVADQLQHSPQPKEVTEVKPT
TSATPSPKSDPPNPAPSGSAIPRFYFPLGQPVSEDGKELKKVSEVFGTLKEGKAFKSDFG
EIAKVCNCPLYWKGPLFLAAGGDKLGCVTSASFQPLWKRIIQKYHDDYSRFMAIMTRMKG
SYLTADDFVPLIQDVIDTHPGLTFLQEAQEFHSRYLHTVIARIFYTVNRSWSGQISIPEL
RRSNLLQVISSLEEEDDINQITDFFSYEHFYVIYCKFWELDTDHDLFISQQDLARHNDGA
ISSRMAERIFSGAVTRGSTVSREGKMSYTEFVWFLLAEEDKKHPTAIEYWFRCMDLDGDG
LLSMYELEYFYEEQYNKMVSLGIEPMPFEDCLCQMLDMINPAIPGKISLRDLKQSRMTPL
FFDTFFNLEKYLDHEQRDPFAAAKEAEDMEGMSDWERYAAEEYEMLVADETMPGQDDVFD
DDALESAEVRRVTRADMEEADYDYTGIGDVSTITAQRSVTSSLAATNQQEGVK
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgctgtgtgcggtgccttgccagtttctcggattgaagattccgatataccac
agtgttcttgtggaccagcgctgtagccgtgctatacaccactgcgacgtctgtaacgtc
gtacagcgcttggagtcgggggctgcgattgtgtgtaaatctatccactatggcgtgtgt
caacccgtggccattcccccaaccaaggccaggattatcaagaaaagagaggagaaagcg
acggccaaggtttctccacattcgccgcctgctaagcctcagctttcaccccaacccaag
gtagccgaccaactccaacactcaccccaacctaaagaggtgaccgaggtcaaaccaacc
acctctgccacaccgtccccgaagtcggacccgcccaaccctgcgccctcgggctcagcc
atcccgaggttctacttccccctcggtcagccagtgtccgaggacggcaaagagctgaag
aaagtgtccgaggtcttcgggacgttgaaggaggggaaagcgttcaagagtgattttgga
gaaatagcaaaggtgtgtaactgtcccctgtactggaaaggaccgttatttctggcagca
ggaggagacaagctgggctgcgtcacttccgcttccttccaacccttgtggaaaagaata
atccagaagtaccatgacgactactcacgcttcatggctatcatgacccggatgaaggga
agctaccttacagcagacgacttcgtgccacttatacaggatgttatagacacccacccg
ggactgacattcttacaggaagctcaggaattccactccaggtaccttcacacagtcatc
gcccggatattctacactgtcaacaggtcctggtctggacaaattagcatcccggaactc
cgcaggtccaacctattacaggtaatttcgtctttagaagaggaagacgacatcaaccag
atcacagacttcttctcgtacgagcatttctacgtcatctactgcaaattctgggagctg
gacacggaccacgacttgtttatcagccagcaggacctggctagacataacgatggtgca
atatcgtctcggatggcggaaagaatattctctggagcggtgacaagaggaagcactgtt
tctcgcgaaggcaagatgagctacacggagtttgtctggtttctgctggcggaagaagac
aagaaacacccaacagcgatagagtattggttccggtgtatggacctggacggagacggc
ctactgtccatgtacgaactggagtacttctatgaagaacagtacaataagatggtgtcc
ctggggatcgaacccatgccgttcgaagactgtctgtgtcagatgttggacatgatcaat
ccagcaataccaggcaaaatatctcttcgtgacctaaaacagagcagaatgacgccgttg
ttcttcgacactttcttcaacctggaaaaatacctggaccacgagcagagagatccattc
gctgcggcaaaggaggctgaggatatggaggggatgtctgactgggagcggtacgccgct
gaggagtacgagatgctggtggcagacgagaccatgccgggacaggacgatgtgtttgat
gatgacgcgttagaaagtgcggaggtaagacgagtgaccagagcagacatggaagaggct
gattacgattacacaggtataggtgacgtcagcacaataactgcgcagaggagcgtgacg
tcatcactagcagctaccaatcaacaggaaggagtaaagtga
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