Branchiostoma floridae (Florida lancelet): 118427473
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Entry
118427473 CDS
T01074
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 4-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo00061
Fatty acid biosynthesis
bfo00071
Fatty acid degradation
bfo01100
Metabolic pathways
bfo01212
Fatty acid metabolism
bfo04146
Peroxisome
Module
bfo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
118427473
00071 Fatty acid degradation
118427473
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
118427473
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bfo01004
]
118427473
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bfo04147
]
118427473
Enzymes [BR:
bfo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
118427473
Lipid biosynthesis proteins [BR:
bfo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
118427473
Exosome [BR:
bfo04147
]
Exosomal proteins
Exosomal proteins of breast milk
118427473
Exosomal proteins of breast cancer cells
118427473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
118427473
NCBI-ProteinID:
XP_035693182
UniProt:
A0A9J7N4R4
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Position
12:22074523..22100447
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AA seq
730 aa
AA seq
DB search
MSQCTDPKSKKATPTTMHMLSAHVAGVLQYLSASPLLLLAVLPLISLLLVSVVLAAIKLA
MSRRIRARPQDGNPAAPYRSVDSPELKTMMFEECDTIDKLWSRAVGLYATKKCLGTRELL
SEEDEVQPNGKVFKKVILGEYKWQTYTDVDRRIVSLGQGLAALGQKPRNNVLMLAETRAD
WMVTAQTCFKFNYPLVTIYATLGEEAIAHGINESEATHVFTNAELLPKIKNVAGKIPKVQ
YIIYMDALNNKPAATEGFPAGIQILSMAQVEEMGTRAENANRPIQPPVPDDLAVIMYTSG
STGLPKGVMIAHRNLIGGMAGQCDRIPGLGPKDTYIGYLPLAHVLELSAEISCLAFGTPI
GYSSPLTLSDQSSKIKRGSKGDASVLRPTLMAAVPVIMDRIYKTVMDKVNEGGKWKKAMF
NVAYGYKLKLVENGSDTPLLNRSLFKPVRSILGGKIRMMLSGGAPLSATTQRFMNVCFCC
PVLQGYGLTETCGAGTVTEVDDLTTGRVGAPLICNEIKLVDWDEGGYTTEDKPYPRGEIV
LGGPNITMGYYKNPQQTAEDFREEGGNRWFYTGDIGEFHPDGCLKIIDRKKDLVKLQAGE
YVSLGKVEAALKNNSLVDNICVYASSDQHYAIALVVPNHKHLKNLSAKMELKTDQWEELC
NDPDLEKEVLKVLHKVAKEAKLERFEIPQKLRLCSESWTPDTGLVTDAFKLKRKNLQSHY
SQDIARLYGS
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgagccagtgtactgaccctaagagcaagaaggccacgcccaccaccatgcacatgctc
agtgcccatgtagccggcgtgctgcagtatctgtctgcctcccctctcctgctcttggct
gtcctccctctcatctcgcttctactcgtatctgtcgtgctagcggccatcaagctcgcc
atgtcgcggagaatccgcgcacgcccccaggacgggaacccggcggccccgtaccggagc
gtggactccccggagctgaagacgatgatgtttgaggagtgtgacacgatcgacaagctg
tggtcgcgtgccgtgggcctgtacgccaccaagaaatgcctgggaacccgggagcttctg
agtgaagaagacgaggttcaacccaacgggaaggtcttcaaaaaggtgatcttaggggag
tacaaatggcagacatacacagacgtggaccggcgtatagtcagcctggggcagggtctg
gccgctctcggacagaagccacggaacaacgtcctgatgctagcggagacgcgggcagac
tggatggtcactgcacagacgtgcttcaagttcaactaccccttggttaccatctatgcg
acccttggagaggaggccatagctcacggcatcaatgaatccgaggccacccatgtgttc
actaatgccgaactactgccaaagattaagaatgttgcaggtaaaatccccaaagtgcaa
tacatcatctacatggatgcactaaacaacaagccggcggcgaccgagggtttcccagca
gggatacagatcctctccatggctcaggtagaggagatgggcaccagagctgaaaatgcg
aaccgtccgatccagcctcccgtcccagacgacctggctgtcatcatgtacaccagcggg
tccacagggctgccaaaaggtgtcatgatagcacacaggaacctgatcgggggcatggct
gggcagtgtgacaggatccctggtctcgggccaaaggacacttacattggatacctgcca
ctggcccatgtactggagctgagtgctgagatatcctgtctggcatttgggacccccatt
ggctactcctcacctctcacactgtctgaccagtctagcaagatcaagagagggagtaag
ggtgatgcctctgtgctgaggccaacactgatggctgctgtaccagttatcatggaccgc
atctacaagacagtcatggacaaggtgaatgaaggaggcaagtggaagaaggccatgttc
aatgtggcgtatggatacaaactcaagctggtggagaacgggtcggacacaccactgcta
aacaggtcccttttcaagccagtgcggtccatccttggtgggaagatcaggatgatgttg
tcgggcggggcccccctctcggcgaccacccagcggttcatgaacgtgtgtttctgctgc
cccgtgctgcaggggtatgggctgacagaaacatgtggggctggcactgttactgaagtt
gatgacctcactacgggtagagtgggcgcaccactcatctgcaatgagatcaaactggtg
gactgggacgaggggggttacaccacggaggacaagccctacccccggggggagatcgtg
ttgggcggacccaacatcaccatggggtactacaagaacccccagcagactgccgaggac
ttccgcgaggagggcggaaaccgatggttctacactggcgacattggggagttccacccg
gacggatgcctcaagatcattgatcgtaagaaggacctagtgaagctgcaggctggggag
tacgtgtcgttgggaaaggtggaggccgcgctgaagaacaactctctcgtggacaacatc
tgtgtgtacgccagcagcgaccagcactacgccatcgctctggtggtgcccaatcacaag
cacctgaagaacctgtctgctaagatggagctaaagactgaccaatgggaggagctgtgt
aacgaccctgatctggagaaggaagtgctgaaggtcttacacaaggtcgcaaaggaagct
aagctggagaggtttgagattccccagaagttacgactgtgcagcgagagctggactcca
gacaccggcctggtcacagacgccttcaaactcaagcggaagaacctgcagtcgcactac
agccaggacatcgcgcggctctacggatcgtaa
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