Branchiostoma floridae (Florida lancelet): 118427485
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Entry
118427485 CDS
T01074
Name
(RefSeq) hemicentin-2-like
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04150
mTOR signaling pathway
bfo04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
118427485
04150 mTOR signaling pathway
118427485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118427485
Membrane trafficking [BR:
bfo04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
118427485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
Ig_3
Ig_2
I-set
ig
PK_Tyr_Ser-Thr
FXa_inhibition
Pkinase
SGL
EGF_LRP2
V-set
Ig_5
DUF6479
DUF5050
EphA2_TM
MpPF26
EGF
C1-set
Protocadherin
PKD
Motif
Other DBs
NCBI-GeneID:
118427485
NCBI-ProteinID:
XP_035693202
UniProt:
A0A9J7M258
LinkDB
All DBs
Position
12:complement(14710942..14742574)
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AA seq
927 aa
AA seq
DB search
MSLISVFFGFVLIIECGEVMGSMTDFILVADRGNRAIYKVNPTSGSKETLPFGPLPNPVA
LDYDKTSGYLYWTDVSGHKIMRAYLNGTGLEPIVTMNAIVPDGLALDIPGGNVYWTDTRR
NAISVARMDGQYLRNLITSQLDEPRAIVLDPPNGYMYWTDWGAHAKIERAGMDGTGRTTL
VNTGLRYPNGLAIDFTDQRLYWCDAGTDKIESSDLNGNDRREFIHQPGTHFFGLAIDDMH
VYGTSWFNSYIYKYSKTSAGPQLIGSGFSDPSGISLVTSGSNPWIFNACTDRNGGCQQLC
LARPGGRTCSCQIGWRLQSDNVTCEYLQPDCSVTTTGITVVLNCELQGVNTAVDLVWTYW
NDVQVGSSQQSVNRVNAPVTTAGTSYTCTATGDALGTPRSCNVTLNTPTVAVSPKPFSTV
LAGTARHSLNCTIDSSGFPAASTLTWTGPAVTTGSTTGGTLATPNLTIRNVRKTDAGNYT
CQATNLIGTGTDTLGMVVQYPPLLTVSAHPNPVNETQPVNLTCIADSNPDVTSMTWIYVD
SSETLVHQTTTGNSLSYWNNSVTYRNAGVYRCTAENGAVGSPISVELTLNVNFRPIFNNT
MEKYNVPRLHAVTLECSAFGYPPEIDFSWTKDGADITDKTTSQYGISALNIASVQVENYG
DYICTASNAHGQHTTVIQLVAETAGESSSTIITIVAAVAGVVVLIAVIVAVIFFVRRTAN
RGKPPQNAANSLELQAVQNNADDGYQSLVVPDRRRSEHTYQGLEACYDNKIDPDTTHENV
TKSMDFPLSQLVLKEKVGHGEFGDVYKAEAWNISGQPGTTAVAVKTLRGYADFIKELEVL
KLLESHPNVVTFLGCCKDSEPLYLLLEYVSGGSLLSNLRTSRSQQTYENLHGGSKSLSSR
DLTKFAWDVANGMSFLSTKKIIPVTWH
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttatttcggtctttttcgggttcgttctaatcatcgaatgcggtgaagtcatg
ggaagcatgacagatttcatacttgttgctgaccgaggtaatagagccatctacaaggtt
aaccctacatcagggtcaaaggaaacacttccctttggtcctttgccaaatcctgtcgcc
ctggactatgacaaaacttccggttacctttactggaccgacgtgtcgggtcacaaaata
atgagggcttatctaaacggaacgggtctggaacctatagtcactatgaacgccatcgtt
ccagatggtttggcccttgacattccaggcggaaacgtttattggacagatacacgccgc
aatgcaatatccgtggcaagaatggacggccaatacctcagaaaccttatcacatcacag
cttgatgaacctcgggcaatcgtactcgatccaccaaatgggtacatgtattggacagat
tggggcgctcatgccaagatagagcgagctggaatggacgggactgggagaacaacttta
gtcaacacggggctaagatatccaaacggacttgctattgatttcacagaccagcgcctg
tactggtgtgacgcaggaacggataaaatcgagagctcggacttgaatggcaatgatcga
cgggaattcattcatcaaccgggaacacatttctttggtctggcgatagatgatatgcac
gtttatgggacgtcttggtttaattcctatatatataaatattctaagacaagtgcggga
ccacagttgataggttcaggattttcagatccgtctggcatctctctagtgacatcagga
agcaatccatggatttttaacgcctgcacggaccggaatgggggctgtcagcagttgtgc
ctagctcgccccggaggcaggacgtgctcatgccagatcggatggaggcttcaatctgat
aacgtcacatgtgaatatctgcaaccagattgcagcgtcactacgacaggaataacagtt
gtgctgaactgcgaactgcaaggcgtcaatactgctgtcgatcttgtctggacatattgg
aatgacgtgcaggttgggtcgtcacaacaatcagtcaaccgggtgaacgcacctgtaaca
acggctggtacaagctacacctgtactgcgaccggcgatgcgctgggaacaccgcggagc
tgcaacgtaacgctcaacaccccaacagtggcagtatccccaaagccattctccacagta
cttgcaggaacagcgaggcacagtctcaactgtacaatagattcatcaggtttcccggca
gcgtctacgcttacctggaccggtccagctgtgacgacaggtagtacgacaggtgggacc
ctggccacgcccaatttgaccattagaaatgtccggaagactgatgctggaaactacacg
tgccaggccacaaacctgataggtacaggcacggatacactcggaatggtggtacaatac
ccaccattgttgacagtaagtgcacatccaaaccctgtgaacgagacccagcccgtcaat
ctgacctgcatagcagacagtaaccctgacgtcacctccatgacgtggatttatgtagat
tcaagtgaaactttggtgcaccagacaacaacagggaactccctctcctattggaacaat
tctgtgacctataggaatgcaggtgtctacagatgtacagctgaaaatggtgccgttggg
tcacccataagcgtggagcttaccctcaacgttaactttcgcccgatcttcaacaataca
atggaaaagtataatgtaccaagattacacgccgtcacactggagtgcagtgccttcggc
tacccaccagagatagacttcagttggacaaaggatggagcagatatcactgataagacc
accagccagtatggaatcagtgcgttgaacatagcaagtgtacaggtagaaaactatggg
gactacatctgtactgccagcaacgctcatggacaacacaccactgttattcaacttgtg
gctgaaactgctggcgaaagctcatccacgatcatcaccatcgtagcagcagtggccggt
gttgtggtgctgatagctgtcattgttgctgtcatatttttcgtgagacgaacagcaaac
cgcggtaaaccaccacagaatgctgctaacagcctggagttgcaagctgtgcaaaacaat
gcagatgacggataccaaagtctcgtggttccagatagacgacggtctgaacatacatat
cagggactagaggcatgctatgacaataagatagatccggacacgacacatgaaaatgta
acaaaatcgatggacttccccctgagtcagctggtcctaaaagaaaaggttgggcacgga
gagtttggagatgtttacaaggctgaagcgtggaacatttccgggcaacctggtacaact
gctgtggccgttaagacattgagaggctatgctgacttcatcaaggaactagaagtgctg
aagctacttgagagtcacccaaatgtcgttacgtttcttggatgctgcaaagactcagag
ccgctctaccttctgcttgagtatgtgtccggtggaagcctactgtcgaacctccggacc
agccgtagtcaacaaacttatgagaacttacacggcggcagcaagtccctatcgtcacgt
gacctcaccaagtttgcctgggacgtggccaatgggatgagcttcctgtcaacgaagaag
atcatccccgtgacctggcactag
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