Branchiostoma floridae (Florida lancelet): 118427583
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Entry
118427583 CDS
T01074
Name
(RefSeq) nuclear pore complex protein Nup133-like
KO
K14300
nuclear pore complex protein Nup133
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118427583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118427583
03036 Chromosome and associated proteins [BR:
bfo03036
]
118427583
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118427583
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
118427583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
baeRF_family11
DUF3708
Motif
Other DBs
NCBI-GeneID:
118427583
NCBI-ProteinID:
XP_035693331
UniProt:
A0A9J7N899
LinkDB
All DBs
Position
1:complement(19627439..19645391)
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AA seq
1149 aa
AA seq
DB search
MFTPRSQATRPKFSPFTAGRVTRNTPSGRRSVGIFTPGKRSPFVGRSPAQNRSLNTSSIL
EETTGHVVQSYGSSLPVLVTEALTLADRDTDLSVHLSENGWAWLVCDRKLFIWRFKQGIT
KSALCKELSLPPSDLVHSADLVSVQPSGDGHVVSVMAASAEGIVRYWPSLAHEGSCVEIS
AEVNGEECLCLTACQPQGYVLATVSGQLLLLTPASVAGQTTVNSRILQVPRGVFAGIGRR
VSSLFAFGAQPTEATGGSTISRVLCGQQSSEDTRSLYILTENSLQKWEISYTGPDKILFE
CDLGEMLRSNAIQAIWGSSPDVAEVANRVQLWFLDMQQTRDGTVILASVSDPGATPAQMY
FVLATLPTSGDSAPSRLSSFSLVNYSVKYQPQDQAAALNYHLLVPGARGKSAYIYTNNLV
VFATVSGFPQPQDKVEFQSPGDRILGAGCCDGQTLLFSNISGIVMVSMVDVHPSMDDSMA
VEPSSRPESVLGGDMESKVEELSMSEDQAARLKGAFLHYCRRNEVQAQAIVDELFPPEDA
LPTEPGSRLDRLVALLSQELIDDYPASDPRWAESVPHDAGSSSSSLILLHQLEDKQKAHD
YLVTFLNTVGIWDRLTSVMVRDTFMPTRLLLCEHAEKLQAAITLRNQHSQYPSLVDAAIK
RVLQQRGQAVPPSGLTPQDVFYREVSRIQDILEALVEYEEDAMAGDMSTRDMVNLMANVN
TIMQAMLQAARKLRQSKNLVYQAHVDTGVREPEYIPWTASSGSRGLRSLIKKQHEVTVEQ
GLLEATDVQTRGTFFQQLMELTDLLLDGYICQLESLGDGEGDQHYMDVKEKYEGDRAAYI
RPLVEAGQHERAASLAEKYCDFSVLVQLCEDTDNQERLERYMVQFADKGFSDFLFKWYMD
TGKRGKLLSQPSSQNAELAQFLASHGHLSWLHDINTSQWDKAHSTLRKLAERETKYAAKK
KTLLSISKLAALASDQPQDSIQQQVGAINNELQLLFFQENLPAEVLQSKGLEPDNMPVLA
PHDLIQLYVGPENDRANEYDFNKALDLMQYIDEDDPAYEGLKLHIWGRALLRDDWSSIST
DEPLFASSHTVFFKTVQLAFKNGVDLQEYLPDVDVLLSSEELGGLKDNSSFQYLVRAGYE
HIQRVMAQE
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccccaagaagtcaggcgactcggcccaaattctcacccttcacggccgggagg
gtgaccagaaacaccccttcgggcagacggagtgttgggatctttactccgggcaagagg
tcaccttttgtgggaagaagcccagcccagaaccggagcctgaatacctcgtccattcta
gaggagaccaccggccacgtggtgcagagttatgggtcatctctacctgtcctcgtcacg
gaggcgctcacactggcagacagagatacagacctgagtgttcacctgagtgagaatggc
tgggcttggcttgtctgtgacaggaaactcttcatatggcgtttcaaacaagggatcaca
aagtctgcactgtgtaaggaactgtccctcccaccaagtgaccttgtccacagtgcagac
ctggtcagtgtccagcctagtggtgacggccatgtcgtgtccgtcatggccgcctcagcc
gaggggatcgtccgttactggcccagtctggcccacgagggctcgtgtgtggagatcagt
gctgaagtgaacggggaggagtgcctctgtctgacagcctgtcagccccagggatatgtc
cttgccacagtgtctgggcagctcctgttgctaacaccagcatcagtggctggacagaca
acagttaacagcaggatcctgcaggttccacggggtgtgtttgctggaattgggagaagg
gtttcctcactgttcgcctttggagctcagcctacagaagccactggaggcagtacaatt
tcaagagttctatgtggccaacagtccagtgaagatacgaggtcactgtacatcctgaca
gaaaactcactacagaagtgggaaatatcgtacacaggaccagacaagatcttgtttgaa
tgtgatcttggggagatgttgaggagcaatgctattcaagccatctggggctcatcacca
gatgttgctgaggtggccaaccgtgttcagctgtggtttctggacatgcagcagacaagg
gatggcacagtgatcttggcaagtgtgtcggatccgggggcaactcctgcacagatgtac
tttgttcttgctaccctgccaacgtcgggtgattcagctccatccaggctgagtagcttc
tccttggtcaactactctgtaaagtatcagccacaagaccaagcagctgcactgaactac
catctcctggtgcccggggcacgtggcaaaagtgcttacatctacacaaacaacctggta
gtctttgcaacagtgtctggcttcccccagcctcaggacaaggttgagtttcagtctcct
ggtgatcgcattctgggagcaggttgctgtgatggccaaactttgctgttctctaacatc
agtggcattgtcatggtcagcatggtggacgtacatcccagtatggatgactccatggca
gttgagccatcctcaagacccgagtctgtactaggaggagacatggagtccaaggtagag
gagttgagtatgagtgaggaccaggcagcacgacttaagggtgccttcttacactactgc
aggaggaatgaagtccaagcccaggccatagtggacgagctgttcccaccagaggatgcc
ctccccacagagccaggctccaggctggacagacttgtggccctgttgagtcaggagttg
attgacgactaccctgcctctgatcctagatgggcggagtctgttcctcatgatgctggc
tcctcctccagctctctgatcctgctgcaccagctggaagacaaacagaaggcccatgac
taccttgtcaccttcctcaacactgtgggcatctgggacaggttaacctccgtgatggtg
agggacaccttcatgcctacacgtctcctcctgtgtgaacacgctgagaaactccaggct
gccatcaccctcaggaaccaacactcccagtatccgagtctggtggacgctgccatcaag
agagtcttacaacagaggggacaagctgttccaccttctggactcaccccacaggatgtc
ttctacagagaagtgtctcggatccaggacattctggaggcacttgttgagtatgaggaa
gatgccatggctggagacatgtccacaagagatatggtcaatcttatggccaatgtcaac
actatcatgcaggccatgttacaggcagccaggaaactgcgtcagtccaaaaaccttgtt
taccaggcccatgtggacacaggtgtcagggaaccagagtacattccatggacagcctct
tcaggctctagaggactgcgatccctcatcaagaaacagcatgaggtgacagtagaacag
ggcttgctggaggctacagacgtgcagaccaggggaacgttcttccagcagctgatggag
ctgacagacctgttgttggacgggtacatctgtcagttagagtccctgggggacggggag
ggggaccagcactacatggatgtcaaggagaagtacgagggagacagggcagcttacatc
agacctctggttgaggcaggacagcacgagcgggcagcctccctggctgagaagtactgt
gacttcagtgtgctggtccagctgtgtgaggacactgacaaccaggagaggctggagagg
tacatggtgcagtttgctgacaagggtttctctgacttcctgttcaagtggtacatggat
acaggaaagcgagggaagctgttgtcccagccgtcctcccagaatgccgagctggcccag
ttcctggcttcccatgggcacttgagctggctgcatgacatcaacaccagccaatgggac
aaggcacattcaactctgaggaagttggcagagagggagaccaaatatgctgcaaaaaag
aagactctgttgagtatcagcaaactggcagctctagcatctgaccaaccacaggactcg
atacaacagcaagtaggagcaatcaacaatgagctgcagctgctgtttttccaggagaac
ctacctgcagaagtgctgcagagcaaaggtttggaaccagacaacatgcctgtactagct
ccacatgatctgatacagttgtatgttggaccagaaaatgacagagccaatgaatatgac
ttcaacaaggccctggatctaatgcagtatattgatgaggatgatccagcttatgaaggt
ctaaagcttcacatatggggtagagcactgctgagggatgactggtccagtatttccaca
gatgagcccctgtttgccagtagtcacacagtgttcttcaaaactgtgcagctggcattc
aaaaatggtgtggacctacaagagtacctgcctgatgtagacgtgctcctgtcttcagaa
gaactaggaggtctcaaagacaactccagtttccagtatctagtcagagcaggatatgaa
cacatacagagagtcatggctcaggagtaa
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integrated database retrieval system
