KEGG   Branchiostoma floridae (Florida lancelet): 118427672
Entry
118427672         CDS       T01074                                 
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1-like
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
bfo  Branchiostoma floridae (Florida lancelet)
Pathway
bfo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bfo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    118427672
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bfo03400]
    118427672
DNA repair and recombination proteins [BR:bfo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     118427672
SSDB
Motif
Pfam: Tyr-DNA_phospho zf-CCHH
Other DBs
NCBI-GeneID: 118427672
NCBI-ProteinID: XP_035693489
UniProt: A0A9J7M3F3
LinkDB
Position
1:35082742..35153107
AA seq 594 aa
MSWSLSDSDSDESTDLGPSLHGGRKCEESDEDCAGESSRTEQIDDSSSGGQAGPSGSGRT
TSTSTSTNERGRREGKQKRKDERDRRPECKYGRKCYRKNPLHLQQFRHPGASSSSSDEEK
SSPPHKKLKTGSPSAAASSSSSSSSQAAEPGPYAFFLTKVSGIAARFNQTGAVHISDILS
AEKGKLLASAQFNYMIDIPWLRQQYPQEARGKPLLIVHGDSGLSKVRLQEETHHFSNIQL
CQARLEIMYGTHHSKMMFLLFEDGLQIVIHTANLIQQDWHQKTQGVWLSPRFPKLSDGSS
PSDGDSPTHFKADLLAYLAAYKKSALDGWRRHIQEHDMSEARVHIVASVPGRHQGGQKNQ
WGHLKLRQVFQERGPPADQVKGWPVIGQFSSIGSLGADAQKWLCGEWLSSLAAVKGKPSL
MMGTRQPQLQLIYPSVNNVRTSLEGYPAGGSLPYSINTARKQPYLNKFLHQWSASARGRT
RASPHIKTYTRTSPDYSRLAWFLVTSANLSKAAWGALEKNGAQLMIRSYEIGVLFLPQDF
GEDTTFAVHASNSEPFPIPYDLPPLPYGTNDQPWVVDIPYVNKPDSHGCIWQPS
NT seq 1785 nt   +upstreamnt  +downstreamnt
atgtcatggtccctgagtgattctgattctgatgaatcgaccgacctcggcccgtctctc
cacggaggaaggaaatgtgaagaaagtgacgaagactgtgctggagaaagtagcaggact
gaacagatagatgacagctctagtggtggtcaggctgggccttcagggtcaggaaggact
actagtactagtactagtactaatgagagaggacgtcgtgaggggaaacagaagagaaaa
gatgagagagacaggagaccggagtgtaagtacgggcgaaagtgttacaggaagaacccc
ctccatctccaacagttcaggcatccaggggcctcatcatcatcatctgatgaggaaaaa
tcttccccacctcacaaaaagttgaaaactgggtcaccatctgcagctgcatcatcatca
tcatcatcatcatcacaggcagcagagccaggcccgtacgcattcttcctgacgaaagtg
tccggcatcgcagccaggtttaaccagactggagccgtgcacatctcagatattttatcc
gctgagaagggaaagttgctggcatcagctcagtttaactacatgattgacatcccctgg
ctcaggcagcagtatccacaggaagcaagggggaaacccttactgattgtacacggagac
agcgggttgtctaaagtcaggctgcaggaggaaacgcaccacttctccaacatccagctc
tgtcaggcccgactggagatcatgtatggaacacatcacagtaagatgatgttcctccta
ttcgaggacggcctgcaaatcgtcatccacactgcaaatctcatccaacaagactggcac
caaaaaactcaaggggtctggttgagtcctcggttccccaaactgagcgacggatctagc
ccctctgacggagactccccaacccacttcaaggcagacctgctggcatatctggctgcc
tacaaaaaatctgccctggatggatggagaagacacatacaggagcatgacatgtcagaa
gcaagggttcatatcgtggcctcagtaccagggagacatcaggggggacagaagaaccag
tggggtcacctgaaactacgacaggtgttccaagagagaggtccacctgcagaccaggtg
aaaggttggcctgtgattggccagttctccagtatcgggtccctcggtgccgacgcccag
aaatggctgtgtggagaatggttgtccagtctggctgcagtgaaggggaaaccaagcctc
atgatgggcaccagacagccgcagctacagttgatttacccaagtgtgaacaatgttcgg
accagtctggaaggatacccagctggtgggtcgctaccttacagcatcaatactgccagg
aagcagccatacctgaacaagttcctgcaccagtggagtgccagtgcccgaggtaggact
agagcttccccacacatcaaaacctacaccagaacatctcctgactacagcagactggcc
tggttcctggttaccagtgctaacctgtccaaggcagcctggggagccctggagaaaaac
ggtgcccagctgatgatcaggtcctacgagatcggagttctcttcctccctcaggacttt
ggtgaggacacaacatttgctgtgcacgcctccaactctgaacccttccccattccatat
gacctgccaccacttccttatggcacaaatgaccagccttgggttgtggacattccatac
gtcaacaaaccggacagtcacgggtgcatctggcaaccttcataa

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