Branchiostoma floridae (Florida lancelet): 118427773
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Entry
118427773 CDS
T01074
Name
(RefSeq) uncharacterized protein LOC118427773 isoform X1
KO
K14284
nuclear RNA export factor
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03008
Ribosome biogenesis in eukaryotes
bfo03013
Nucleocytoplasmic transport
bfo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118427773
03015 mRNA surveillance pathway
118427773
03008 Ribosome biogenesis in eukaryotes
118427773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118427773
03009 Ribosome biogenesis [BR:
bfo03009
]
118427773
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118427773
mRNA cycle factors
Stress granule specific factors
118427773
Ribosome biogenesis [BR:
bfo03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
118427773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
Tap-RNA_bind
LRR_4
T6SS_TssF
HOXB-AS3
Motif
Other DBs
NCBI-GeneID:
118427773
NCBI-ProteinID:
XP_035693592
UniProt:
A0A9J7M2Y6
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Position
12:10397281..10408449
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AA seq
854 aa
AA seq
DB search
MALTFGLFGQQLGYVFKPPTRREAPRSSQSPFQKITSFSGGGEGQAVKAEKSAEQTEDKE
GGGVEEGEKAKKPAEQTGKNEEYRASPAPSGYGQSRGRRAAKKNRRKRSGKSGQARKGGL
TQRYNPYGGPQSGNSGNVQMIPVVPWPVAEVCRGTESWVHNKAHFNSAGVGAEDCKNKTI
KVPGLGELISQGTETQVHNTLQYSNSAGSRAEDGHYKFDFKIKVSANPESLGQIKETQVH
NTVHSNSAGEGAEDCKNNITVPEELIGQGMETKEGIEIQVHNTAHSNNAGEGAEDCKNNI
TEPGEMIGQGIETKEGIETKMHNTVHSNSAGEGTEDDIGKNNIIAQAELIGQGTETKVHN
IAHSNSAGEGAEDCKSNITVQTNLIGHGIETKEDIETKVHNTVGLGEGADDCKNNITVQA
ELIGQGKETKVHSTVHSHSAEEGAEDCKNNITVPVEMTGLGIETREGIETQVHNTVHSHS
AEEGAEDCKNNTTEPVEMTGLGIDTIETKSKMHNTVHSHSAVEDVQLKLDFKITVPADLE
SIGQVKETQVHNTVPSNRAENVLRMVSCAENGQLKITVPADPESLGQVTETEAHNTLLSQ
TSTSAEDCTEDGWHKITVLHGKKYDKELLTFLLKTMCPVPFQFTDFHYVKSRHMVFYVPD
KATADDLQSLSRKIKTRNGKLVIVANPELPRSLQAMDQATMEAIKLCILKRFDAATSTLN
LSNLYWDTELQAQDIHVVLNQKFYMNSVISIIMEIVPVIDHLDISNNRLYNLNSLADLVS
IREGVTSLNLSQNQLKCVSELDKIKAWNLTMLWMNDNPLWNNYFEPSTYFSDVRKRFPNI
VRLDGHVYSVPTES
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcgctaacatttggtctttttggtcagcaattaggatatgtatttaagccaccaact
aggagagaagccccccggagcagtcagagccctttccagaagatcacgtcgttttcaggt
ggtggagagggacaagcagtgaaagcagagaagtcagccgagcagacagaagataaggaa
ggtggaggagtggaggaaggagagaaagccaagaagccagctgagcagacaggaaagaat
gaagaatacagagcatcacctgcccccagtggatatggtcagagccgtggccgtagggct
gccaagaaaaatagaagaaaaagatctggaaaaagtggacaagcacggaaagggggactg
acacaaagatataatccatatggcggaccccagtctggtaactctgggaatgtgcagatg
attccagtggtgccatggccagtagcagaagtttgccggggtacagagagttgggtgcac
aacaaagcacatttcaacagtgcaggagtgggtgctgaggattgcaagaacaaaacaatc
aaagtaccaggcctaggggagttgattagccagggtacagagactcaggtgcacaataca
ctacaatattctaacagtgcaggatcccgtgctgaggatggccattacaagtttgatttc
aaaatcaaggtatcagcaaatccagagtcacttggccagattaaagagactcaggtgcac
aacacagtacattccaacagtgcaggagagggtgctgaggattgcaagaacaatatcaca
gtgccagaagagttgattggccagggcatggaaactaaggagggtatagaaattcaggtg
cacaacacagcacattccaacaatgcaggagaaggtgctgaggattgcaagaacaatatc
acagaaccaggggagatgattggccagggtatagaaactaaagagggtatagagactaag
atgcacaacacagtacattctaacagtgcaggagagggtactgaggatgacattggcaag
aacaatatcatagcacaagcagagttgattggccagggtacagaaactaaggtgcacaac
atagcacattccaacagtgcaggagagggtgctgaggactgtaagagcaatatcacagta
caaacaaatttgattggtcacggtatagaaactaaggaggatatagaaactaaggttcac
aacacagtaggactaggagagggtgctgatgattgcaagaacaatatcacagtacaagca
gagttgatcggtcagggtaaagaaactaaagtgcacagcacagtccattcccacagtgca
gaagagggtgctgaggattgcaagaacaatatcacagtaccagtggagatgactggtctg
ggtatagaaactagggagggtatagagacccaggtgcataacacagtccattcccacagt
gcagaagagggtgctgaggattgcaagaacaataccacagaaccagtggagatgactggt
ctgggtatagacactatagaaactaagagtaagatgcacaacacagtacattcccacagt
gcagtagaggatgtccagctcaagcttgatttcaagatcacagtaccagcagatctggag
tcgattggtcaggttaaggagactcaggtgcacaacacagtaccttccaacagagcagag
aatgttctgagaatggtcagctgtgctgagaatggtcagctcaaaatcactgtaccagcc
gatccagagtcacttggccaggttacagagactgaggcacacaacacactactttcccag
actagtactagtgctgaagactgtactgaggatggctggcacaaaatcacagtacttcat
ggaaagaaatatgacaaggagttgttaacatttctgctgaagacaatgtgcccagtacca
ttccagtttacagacttccactatgtcaagtctcgtcacatggttttctacgttcctgac
aaggccacagccgacgacctccaaagtctcagcaggaaaatcaagacaaggaatggcaag
cttgttatcgttgccaatcctgaattacctagaagtctccaggctatggaccaggctaca
atggaggcaatcaaactgtgcattctgaagagatttgatgctgccacctcaacactcaac
ctgagcaatctgtattgggacactgaactacaagcacaggacatccatgtggtcctgaac
cagaagttttacatgaactctgtcatttcaatcatcatggagattgtgccagtgattgat
caccttgacatcagtaacaatagactgtacaacctgaacagcctggcagacttagtctcc
atcagagagggtgtcacctccttgaacctttctcagaatcagttaaagtgtgtttctgaa
ctggacaagatcaaggcttggaacctgactatgctctggatgaatgacaacccattgtgg
aacaattactttgaaccctctacctatttcagcgatgtgaggaaacggttcccaaacata
gtcaggctggatggacatgtgtactcagtgccaactgaatcatag
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