Branchiostoma floridae (Florida lancelet): 118428152
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Entry
118428152 CDS
T01074
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bfo01002
]
118428152
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfo04121
]
118428152
Enzymes [BR:
bfo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118428152
Peptidases and inhibitors [BR:
bfo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118428152
Ubiquitin system [BR:
bfo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118428152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
Dsc3_N
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
118428152
NCBI-ProteinID:
XP_035694037
UniProt:
A0A9J7N5H4
LinkDB
All DBs
Position
12:4877163..4930020
Genome browser
AA seq
2592 aa
AA seq
DB search
MTVAMRGSPAGGDNPQQDSPQNPAPGGTPANPPQQQQQQQQAGTPTAPPVEPPPAPEGEG
GDVATEGVEELPEGVEPDFPNAELAKLDDMINRPRWVVPVLPKGELEVLLEASIELCKKS
LDTRSEACQRFFRDGLTISFTKILTDDAVSGWKFEIHRCIFKNAEKLIELCVTKLSQDWF
PLLDLLAMALNPHCKFHIYNGTRPSETVPVGTQLADDELFARPPDPRNPKGWLVDLINRF
GQLEGFKILKERFLAGHLNVPIIAALIKPWGQCYELLTPHTVEEYFQPIIGIVPTFLDGL
TDEELKKEAKNEAKNDQLSQIIKALKCLASRVPNQEETMKNLEMFRLKMILRLLQISSFN
GKMNALNEVNKVIASVSYYTHRHSGMEEDEWLTAERMAEWIQQNNVLSIVLRDSLHQPQY
VEKLEKILRFVIKEKALTMGDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLF
DCFKESWKDASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSEDVPTDIMDQAL
SAHIKILDYSCSQDRDAQKTQWIDRFVDELKNDQWVLPALKQIREICQLFGEAPQNYNHA
QRSPHVYYRHEVINQLQQTHSLVTLVAENLASYMNKVRGMLKENPDMDPNVVQPSERYTH
LQQVQERLNFLRFLLKDGQLWLCAPQAKQIWNCLAENAVFVSDREACFKWFSKLMGDEPD
LDPEINRDFFEGNVLQLDPALLTENGIKCFDRFFKAVNLKENKLVCKRRTYMMDNLELIG
LEYIWRVILLGQDEIAAKAIDLLRETYTNLGPRLQTNQVDIHVDFIQSCFDRLKAAYDTI
CILENDKDSLEDIRTEVTRMIRVLSVLREYISEYDNDFTEERTILPMARACRGKHVSLIV
RFPNQGRQVEDLDVWSHTNETVGALRRHILTRVKANNANTKLDLYVNGELLDPADDRKLI
SQVQLRDKTLITAKLCQVGANMPSSPDSSSDSSVGSPSNMFDGPNVEAESCLPGVLAAQQ
QRYAQFLFQLSDLGSSLAIPQLRDGARSLLKLMPADTHTVDKLRALCLDHAKLGEQSLSP
SLESLFFSQSPAQVLYHLEVVYALLMPANQPLGEDALEFQINFLKSGGVSCVLNMLTKNN
FLPNADMDTRRSAYLQVLKVGKLMLTTVGYAMVQHVAEACQPDSPHSGTVSASAHNHAIV
LQQALHHIPNPNAECMLRNVALRLGQQCVEDAMTTLPDMPVIKAIQKISWAVASGSMHLV
HGSNEEIHKAFDKFRVYSQPGQTKLPDSEDVQVCKEALEVLTVSLALCPVALEALSKDKV
WQCVIIDLLLHCKSRAVRVSAAEQFLLMATKCCTGHRPLVFFITLLFTVLSGTAKDHARS
STEYFQLLCRLLNYACASNAPLPTAEVLLNNEIQWLKRVRDMVQQSGLENVIDEALLEGH
LGVTCELLSFQPAEKKYHIGSEKGGANLIKELVEEFLFPASKIVLQARKSGEYPSEQALP
VCSTSNTTNAAFDLLVTLCTGCVPNLKLLSDMLTDMYYSDRDAPLIEWEYLPPVGPRPVK
GFVGLKNAGATCYMNSVIQQLYMINSVRSGILTAEGAANDNMDEELSGDEKQDSESNIDP
GEERESFHMDDKPSGKQEGRKEYDMGVLRQIQAIFGHLAASKLQYYVPRGFWKQFRLWGE
PVNLREQHDALEFFNSLVDSLDEALKTLGYTPVLSKVLGGSFADQKICKDCPHRYSREES
FTTLNVDIRNHSNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRMCIKKLPQVLAIQ
LKRFDYDWERECAIKFNDYFEFPREFDMEPYTVKGLAKIEGEEIHGDDESPDNEDAEPPS
TKYRLTGILVHSGQASGGHYYSYIIQRSPEGQLRWYKFDDGEVTECKMDDDEEIKNQCFG
GEYMGEVFDHMLKRMSYRRQKRWWNAYILFYERYDVGDIEHVSKSIEELSLENKGGLGVG
MPLPIERAVRKQNVQFMHNKMQYSQEYFQFMRKLITCNAHYMSLQPGQDELSREVEELAM
LSIQLASKFLFTTGFHTKKTLRGSANEWYDALSVLLRHSRTVRSWFAHNVLFSHPSRFSE
YLLECPSSEVRNAFAKIIVFLAHFSRDDGPCPPPLLPGKQAPAVIDANATLSDHLLTAVL
ALLKKEVSEHGRHLTQYFHLFLMYANLGLPERTQLLKLNVPAMFMLVALDEGPGPPIKYQ
YAELGKLYSVVSLLVRCCDVSKYMQSSISGNPPLANPHGDPVCQQPIMPLQPQVHEILFV
RTSYVKKLIEDCNNSEETTKLLRFCCWENPHFSSTVLSELLWQVAYSYTYELRPYLDLLL
QMLLIEDSWQNHRIHNALKEPQNVQRLEGIPDDRDGLFDTIQRSKNHYQKRAYQCIKFMV
ALFSSCMPAQQMLQSNGDLKRKWTWAVEWLGDELERRPYSANTQYTYNNWSPPAQSNETS
NGYFLERSHSARLTLSKACELCPEEEPEEQEVVDDADSSPPDTGVTTHYSQQQIHHIQQQ
QHPATTHHGVSIPPNNQANPGNYVPPANIHHQNNTINNALTGQSRQPVQSHDNNSDNGED
SDSIQGRSNNEL
NT seq
7779 nt
NT seq
+upstream
nt +downstream
nt
atgactgtggccatgcgtggcagccccgcaggcggggacaacccccagcaggactcaccc
cagaatccagccccagggggtacacctgccaaccctccccagcaacaacaacaacaacaa
caagcagggactccgacagcaccccctgtagaaccaccccctgcacctgagggggagggg
ggtgatgtggcaacggagggggtagaggagcttcctgagggggtggagcctgacttcccc
aatgcggagcttgctaagctggatgacatgataaaccgaccacgctgggtggtgcctgta
ctgcccaagggggagctggaggttctactggaggcctccatagagctgtgcaagaaaagc
ctggacacgcggagcgaagcttgtcagcgattcttccgcgacggtctcaccatttccttc
accaaaatcctgacagacgacgctgttagcggctggaaattcgagatccatagatgtatc
tttaagaatgcagagaagttgatagagctgtgtgtgaccaagttgtctcaggactggttc
cctctgctggaccttttagcaatggccctcaacccacactgcaaatttcatatctacaat
ggcacaaggccgtcagaaactgtgccagttggaacccagttggctgatgatgaacttttt
gccaggcccccagaccccagaaacccaaagggttggctagtggatttgataaaccggttt
ggccagttggaaggattcaagattctgaaggaacgattcctggccggacatctcaatgtt
cccatcattgctgctcttatcaaaccgtggggccaatgctacgagctccttactccccac
accgtggaggaatacttccagccaatcatcggcatcgtccccacctttctggacgggctg
acggacgaagagctgaagaaggaagccaagaacgaggccaagaacgaccagctgtctcag
atcatcaaggcgctgaagtgtctggcctcccgagtccccaaccaggaggagaccatgaag
aatctggagatgttccgcctcaagatgatcctcagattgctccagatctcctccttcaat
ggtaagatgaatgctctaaacgaggtgaacaaagtgatcgccagcgtgtcgtactacacc
caccgacacagtggtatggaggaggatgagtggctcacggctgagagaatggcggaatgg
atccagcagaacaacgtcctgtccatcgtgctccgtgacagcctgcaccagccccagtac
gtggagaaactagagaaaatcctgcgctttgtcatcaaggagaaggctctaaccatgggg
gacctggacaacatctgggctgcacaggctgggaagcacgaggctatagtgaagaatgtc
cacgacttgttggccaaactggcctgggacttctcaccagaacagcttgaccatctcttt
gactgcttcaaggagagctggaaagatgccagtaagaaacagcgagagaagctactggag
ctgatccgacggctggcagaggacgacaaggatggagtcatggcccacaaggttttaaac
ctcttgtggaacctggcgcacagtgaagacgtccccacagacatcatggaccaggccctg
agtgcacacattaagatcctggactacagctgttcacaggatcgtgatgcccagaagacc
cagtggatcgaccgctttgtcgacgaactcaagaacgaccagtgggttctccccgccctc
aaacaaatccgcgaaatctgccaactcttcggcgaggctccgcaaaattacaaccacgcc
cagcgcagtccccacgtttactatcggcacgaggtcataaaccagctacaacagactcat
tctctagtgacgctcgtggcggaaaatctcgcttcttacatgaacaaagttcggggaatg
ctgaaggaaaacccggacatggacccgaatgttgtccagccaagcgagaggtacacccat
ttacagcaggtccaggaaagactcaactttcttaggtttttactgaaggacggccagctg
tggctgtgtgcccctcaagccaaacagatctggaactgtctggctgagaatgctgtgttt
gttagtgacagagaggcttgcttcaagtggttttctaagctgatgggagatgagcctgac
cttgaccctgagatcaacagagacttctttgaaggcaacgttctacagctggacccagca
ctgcttacagagaatgggattaaatgctttgaccggttcttcaaggcagtgaacctgaag
gagaacaagctggtgtgcaagcggagaacgtacatgatggacaacctggagctgatcggg
ctggagtacatctggagagtcatcctcctgggacaggatgagatagcagccaaggccatc
gacctactgagggaaacttacaccaacctggggccgcggctacagactaaccaggttgac
atccatgtagatttcatccagtcctgttttgaccgcctgaaagctgcgtacgacacgata
tgtatcctagagaacgacaaggacagtttggaggacatcagaacggaggtcacccgtatg
atccgtgtgctgagtgttcttcgggaatacatcagcgagtacgataacgacttcaccgag
gagagaaccatccttccaatggccagggcctgcagagggaagcatgtgtcgttgatcgtc
cgtttcccaaaccagggaagacaggtggaggatttggatgtctggtctcacacaaacgag
actgttggggcactacggagacacattctcaccagagttaaagcaaacaatgccaacacc
aagctggacctgtatgtgaatggagaactgctggacccagctgacgataggaaactcatc
tcacaggttcaactgagagataaaacattgatcacagcgaaactgtgccaggtgggtgcc
aacatgccgtcgtctcccgacagctcgtctgactcgtcagtgggttcccccagtaacatg
ttcgatggtcccaatgtggaggctgagagctgtctacctggggtgttggcagcccagcag
cagcgttatgcccagttcctgttccagctgtcagacctgggcagctccctggccatcccc
cagctgagagacggggcacgatcgctactcaagctcatgcctgcagatacccacacagtg
gataagctgcgtgccctgtgtctggaccacgctaagctgggagaacagagtctgtccccg
tccctggagtctcttttcttctcacagtccccggcacaagtactctatcatctagaggtt
gtctatgcattgctgatgccagccaaccagccattgggagaagacgccctggagttccag
attaacttcctgaagagcggaggcgtgtcctgtgtgctcaacatgctgaccaagaacaac
tttctcccaaatgctgacatggacaccagaaggtcagcgtatctccaggtcctgaaggta
ggaaagctgatgctgacgacggttgggtacgccatggtgcagcacgttgcagaggcgtgc
cagccggacagcccccactccggcacggtgtctgccagcgcacataaccatgccatcgtg
ctgcagcaggccctacaccacatccccaaccccaacgctgagtgcatgctgcgaaacgtg
gctctgcgactggggcagcagtgtgtcgaggatgccatgacaaccctccccgacatgcca
gtcatcaaggctatccagaagatctcgtgggcagtcgccagcggcagcatgcatctggtg
catgggtccaatgaggagatacacaaggcattcgataagtttcgtgtgtattcacagcca
gggcagaccaagctacctgacagtgaagacgtgcaggtgtgtaaggaggctctggaggtc
ctgacggtgtccttggcgctgtgtccggtggctctggaggcgctgagtaaggacaaggtg
tggcagtgtgtcatcatcgacctgctgctgcactgtaaaagcagagcggtgcgagtgtct
gcagctgaacagttcctcctcatggccaccaagtgctgcaccggccacaggcctctggtc
ttcttcatcacacttctgttcactgtcctgtcgggtacagccaaggaccatgctagaagt
tccacagaatattttcagttactttgtaggctgctaaactatgcatgtgccagcaatgcc
cccctccccactgctgaggttctactgaacaatgaaatccagtggctaaagagagtcagg
gacatggtgcaacagtctgggttagaaaacgtgatcgacgaggccctgctagaaggccac
ctgggagtcacctgtgagctacttagtttccaaccagccgagaaaaaataccacataggg
tccgagaagggaggggctaatctcatcaaggagctggtggaagagttcctgtttccggcg
tccaaaatcgtgttacaggccagaaaaagcggggagtaccccagcgaacaggcgctgccc
gtctgctcgacgtctaacacgacaaacgcggcctttgacctgctggtgacgctgtgtacg
gggtgtgttcccaacctgaagctgctatccgacatgctcacagacatgtactactcagac
cgagatgcacccctgatcgagtgggagtacctgcccccggtgggacccagacctgtgaag
gggtttgtgggactgaagaacgccggagccacctgctacatgaactctgtcatccaacag
ttgtacatgatcaactcagtgcgatctggcatcctgacagcagagggagctgctaatgat
aacatggacgaagaactgtctggggacgaaaagcaggacagtgagagtaacatcgacccg
ggagaagagagagaaagtttccacatggatgacaagccttctgggaagcaggaggggagg
aaggagtatgacatgggggttttacgtcagatccaggccatcttcggccacctagctgct
agcaagctccagtattatgtaccaaggggattctggaaacaatttagattatggggagaa
ccagtcaaccttagagaacaacacgatgctctagagttcttcaacagcctagtagacagt
ctagacgaggccttgaagacactcgggtacacacctgtcctgtccaaggtgctgggggga
tcctttgccgaccagaagatctgcaaagactgtcctcacagatactcgagagaagagtcg
ttcacgaccctgaatgttgacatcaggaaccacagtaacctgctggactctctggaacag
tatgtgaagggagacctgctggagggggctaatgcctaccactgtgagaaatgtaacaag
aaggttgacactgtgaaaagaatgtgtataaagaaactaccccaagttttagccattcag
ctgaagaggtttgattatgactgggaaagggaatgtgcaatcaagttcaatgattacttt
gaatttcctcgtgagtttgacatggaaccctacacagttaaaggactagccaaaattgaa
ggggaagaaatccatggagacgatgagagcccagacaatgaggatgccgagccacccagt
accaaatacagactgactggcatcctggtacacagtggacaggctagtggggggcactac
tactcctacatcatacagaggtcccctgaaggccagctgcgctggtacaagtttgacgat
ggggaggtgacagagtgtaagatggacgatgatgaggagatcaagaaccagtgcttcggg
ggagagtacatgggggaggtgttcgaccacatgttaaaaagaatgtcctacagacggcag
aagaggtggtggaacgcctacattctgttctacgagcgctacgacgtaggagacatcgaa
cacgtgtcaaaaagtatagaagaattgtcactagaaaataagggaggtttaggagtgggc
atgccgctgcccattgagcgagcggtgaggaaacagaacgtccagttcatgcacaacaag
atgcagtacagccaggagtacttccagttcatgcgcaaactcatcacctgtaacgctcac
tacatgagtctgcagccagggcaggacgagctgagccgagaggtcgaggaactggccatg
ttgagtatccagctggcctccaagttcctcttcaccacggggttccacaccaagaagaca
ctcaggggctcagcgaatgagtggtacgatgccctgagcgtactgctgcgacacagtcgt
acagtccgcagctggtttgctcacaacgtgctgttcagccatcccagtcgtttctccgaa
tacctgctcgagtgccctagttctgaggtgagaaatgcctttgcaaagattatagtgttc
ctggcccatttctcaagagatgatggtccatgtccgcctcccttgctgcctggaaaacaa
gccccggcagtgattgacgcgaacgccacgttgagtgaccacctgctgacagctgtcctg
gctctactgaagaaggaggtatccgagcacggcagacatctcacccagtacttccacctc
ttcctcatgtatgcaaacctcggcctgccagagagaacacagctgctgaagctgaacgta
cccgccatgttcatgctggttgcgctggacgaggggccgggaccccccatcaagtaccag
tacgccgagctgggcaagctgtactccgtcgtctcgctgctggtgcgctgctgtgatgtc
tccaagtacatgcagtcttctatatctggaaaccctcccctagccaacccccacggcgac
cccgtgtgtcagcagcccatcatgccactacaacctcaagtgcacgagatcctgttcgtc
agaacaagctacgtcaagaagttgatagaagactgcaacaactctgaggagactacaaag
ttgcttcggttttgttgctgggagaacccccacttctcgtcgacagtcctgagcgagctt
ctgtggcaggtggcgtactcgtacacgtacgagctcaggccgtacctggacctgctgctg
cagatgctgctcatcgaggactcctggcagaaccacagaatacacaatgcactcaaagaa
ccacagaatgtacaaagactcgaaggcattccagacgatcgggacggtttgttcgacacc
attcagcgctccaaaaaccactatcagaagcgggcctaccagtgcattaagttcatggtg
gcacttttcagcagctgcatgccagcccagcagatgttacagagtaacggggacctgaaa
cgcaagtggacctgggctgtggagtggctgggagatgagctcgagaggaggccttactca
gccaacactcagtacacctacaacaactggtcccctcccgcacagtccaacgaaacttct
aatgggtacttcctggagaggtcacacagtgctcgtctaacgctgtctaaggcctgtgag
ctatgcccagaggaggagccagaggagcaggaggtagtggatgatgcggacagctcgccg
ccggacacaggcgtgaccacacactactcccagcagcagatccaccatatccagcagcag
cagcacccagctacaacacaccatggagtcagcattccccctaataaccaggcgaatcct
ggaaactacgtccctccagccaacatccaccaccaaaacaacaccatcaacaacgcgctg
accggccaatcacgtcagccggtccagtcacatgacaacaactccgacaacggcgaagat
agcgacagcattcaaggtcgaagcaacaatgagttgtga
DBGET
integrated database retrieval system
