Branchiostoma floridae (Florida lancelet): 118428203
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Entry
118428203 CDS
T01074
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like isoform X1
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118428203
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bfo01002
]
118428203
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfo04121
]
118428203
03036 Chromosome and associated proteins [BR:
bfo03036
]
118428203
03400 DNA repair and recombination proteins [BR:
bfo03400
]
118428203
Peptidases and inhibitors [BR:
bfo01002
]
Metallo peptidases
Family M67
118428203
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
118428203
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
118428203
BRISC complex
118428203
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
118428203
DNA repair and recombination proteins [BR:
bfo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
118428203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
BRCC36_C
Prok-JAB
UPF0172
Prefoldin_2
YwqH-like
Dzip-like_N
FlaC_arch
DUF6262
Motif
Other DBs
NCBI-GeneID:
118428203
NCBI-ProteinID:
XP_035694102
UniProt:
A0A9J7M3V3
LinkDB
All DBs
Position
12:20025604..20029479
Genome browser
AA seq
271 aa
AA seq
DB search
MSVSSVHLAADAYMVCLTHALSTEREEVMGLCIGEVSDVDPNRTVHISAVIMLRRSDKRK
DRVEISPEQLSAASTEAERLAVQLNRPMRVVGWYHSHPHITVWPSHVDVQTQQSYQFMDD
CFVGLIFAVFNEDKATKRHQVQVTCFQSINQSPEGEPPMYERIEIPLHILPNDTMSRPCL
ESLVELPQIFSQEEQEAYSRTLGEGLDLTTCIHNGTVYMQSLSHLMEVLSGSLVQTLENR
VQYNKNKVKRLKEEKEQLEKEIEEFHQKNPK
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtatcatctgtgcacctggcagcggatgcctacatggtgtgtctgactcacgcg
ctgtccacggagagggaggaggtcatggggctctgtatcggggaggtgagtgacgtggac
cccaacaggacggtacacatctcagcggtcatcatgctccgacggtcggacaagagaaag
gaccgtgttgagatctcgccggaacagctgtccgctgcgtccacagaggcggagcgtctg
gccgtacagctgaatcgaccaatgagagttgtcggctggtaccactcacatccacacatc
actgtgtggccgtcacatgtcgatgttcagacacaacagtcctaccagttcatggacgac
tgttttgttgggttgatctttgctgtcttcaatgaggacaaggccacaaaaagacaccag
gtgcaggtcacatgtttccagtctatcaaccagagtccagaaggggaacctcctatgtat
gagagaatagagatcccactccacatcttacctaacgacaccatgagtcggccgtgcctg
gagtctctggtggagctgcctcagatcttctcacaggaggaacaggaggcctacagcagg
acattaggggaagggctggacctcaccacctgtatccacaatggtacagtctacatgcag
tccctcagtcacctgatggaggtgcttagtgggtctctagtgcagacactagagaacagg
gtacagtacaacaagaacaaggtaaaaagactgaaagaagagaaagaacaactggagaaa
gagatagaggaattccatcagaagaacccaaaataa
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