Branchiostoma floridae (Florida lancelet): 118428207
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Entry
118428207 CDS
T01074
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13-like
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfo04121
]
118428207
Enzymes [BR:
bfo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118428207
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118428207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8
Prok-RING_4
PHD
zf_RING_Vps8_fungal
zf-RING_16
Hemotin
RINGv
Orbi_NS3
PHDvar_NSD
zf-RING_4
FeoB_associated
zf-C3H2C3
LapA_dom
DUF3483
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
118428207
NCBI-ProteinID:
XP_035694106
UniProt:
A0A9J7M3K1
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All DBs
Position
12:15476928..15499510
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AA seq
400 aa
AA seq
DB search
MFPCRPVPSYITVLYIYAVINLFLLLHVCTVDADVIVTDSINNTVNFMDMPSNFGSQLPD
MGIQGYLAAVNPPHACKAVGPPPPNITELNPIALIRRGNCDFDIKVLNAEKSGFKAAIVY
NDESDVILQMNGNKYYMEVTIPSVFVGLTDGMELQRYDWRTGSQVKLTPDFTIPLHFYLL
PFAIIVGICFVLMLIFMVAKFVRDRRRQRRSRLSKEHLKKIPTKKFKKGDEYDVCAICLD
DYEEGDKLRILPCSHAYHTKCIDPWLTGSKRTCPVCKRRVIPGDDETSDSETSQSDMDSD
DDMPETTPLLGATGPVDRTNSAMGTTDTSRMHHSDEESTETQETDDDDDDSSGDEEEKGA
WGYSGEVEIKDGPSQETKVEMGDEKEEEDEEENKSGPEIV
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtttccgtgccgaccagtcccatcgtacatcacagttttgtacatctatgcagtcatc
aacctgtttctgctgctccatgtgtgcactgtggatgctgatgttatcgtgactgatagc
attaacaacacagtaaacttcatggatatgccatccaactttgggtcccagctacctgac
atggggatacagggttacctagcagccgtgaacccgccccatgcttgtaaagccgtgggc
ccccctcctcccaacatcacagagttgaaccccatcgccttgattcgcagagggaactgt
gactttgacatcaaggtgctgaatgcagaaaaaagtggctttaaagcagctatagtgtac
aacgatgagtcagacgtcatccttcagatgaatggaaataaatattacatggaggtgacc
atcccatcggtgtttgtgggtctgacagatgggatggagctgcagagatatgactggaga
actgggtcgcaggtgaagctgaccccagacttcaccatccccctgcacttctacctgctg
cccttcgctatcatcgtgggcatctgcttcgtcctcatgctcatcttcatggttgcgaaa
tttgtccgtgacagaagacgacagcgtcgttccaggctgtccaaggagcacctgaagaaa
atccccaccaagaagttcaagaaaggtgatgagtatgatgtctgtgccatctgtctggat
gactatgaggagggggacaagctcaggatattgccttgctcccatgcctaccacaccaag
tgcattgacccctggctgacgggcagcaagcgcacctgcccggtgtgcaagcggcgcgtg
attccgggggacgacgagacgtccgactcggagaccagccagtcggacatggatagcgat
gacgacatgccggagaccacgcccctcctgggcgccaccgggcctgtagaccgtaccaac
tctgccatggggaccactgacacttccaggatgcaccactctgatgaggagagtactgag
acccaggagactgatgatgatgatgatgactccagtggtgatgaggaagagaagggagca
tggggctactccggagaagtggagatcaaagatggaccctcccaggagacaaaggtggag
atgggagatgagaaggaagaggaagatgaagaggagaacaagtctggaccagaaattgtg
tga
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