Branchiostoma floridae (Florida lancelet): 118428248
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Entry
118428248 CDS
T01074
Name
(RefSeq) high-affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
118428248
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bfo02000
]
118428248
Transporters [BR:
bfo02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
118428248
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Gene cluster
GFIT
Motif
Pfam:
SSF
DUF6703
DUF6732
Motif
Other DBs
NCBI-GeneID:
118428248
NCBI-ProteinID:
XP_035694147
UniProt:
A0A9J7M3X9
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Position
12:complement(20197432..20204808)
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AA seq
565 aa
AA seq
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MEVNIPGIIAVIVFYLVILAIGLWAARRGAKKEAEAEGAPESEQVILAGRDIGVVIGIMT
MTATWVGGGYINGTAEVIFDPKQGLIWCQAPFGYSTSLLLGGLLFAKKMRSEGYVTMLDP
FQQRYGERMGGLLFIPALLADVCWCGSILAALGTTLTVILGLDVNVSIIISAAIAVSYTL
FGGLFSVIYTDIIQLICIFIGLWISVPFAITNPLVSNIGNTTWTRILYTPINDSSVNVTS
FNETETYGWYGEWDMKRSGYWIDHALLLVFGGIPWQAYFQRVLSSKSPARAQWLSIAAGI
GCFLMSIPSVLIGAIGASTDWPATTYGKDPAIEGEKRMILPLVIQHLTPTWVAFLGLGAV
SAAVMSSTDSSVLASSSMFAKNVYKPLFRQKASETEIVWVMRAAIFVVAALASVLAITVK
SVYGLFVLCSDLVYVVVFPQLVSVVYLKFTNTYGSLCGYIIGLVLRLGGGEDLLHVPAVI
KYPYYDETTGKQLFPFRTLDMICSFLTIILVSHLARLLFLKGKIPMKYDIAGCFHTAEEK
QAPTRESNTANGKSTGEHHELETMN
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggaggttaacatcccgggaattattgcggttattgttttctacctggtgattttggcc
atcgggttgtgggcggcgcgtcgcggggcgaagaaggaggcggaggccgagggcgccccg
gagagcgagcaggtcatcctggccggacgggacatcggagttgtcattgggataatgacc
atgactgccacgtgggtgggaggaggctacatcaatggaacagcggaagtgatctttgac
cccaagcaagggctcatctggtgccaagctccattcggatactccactagcctccttctg
ggaggacttctgttcgccaagaagatgcgttctgaagggtacgtgacgatgttggacccg
ttccagcagcggtacggagagaggatgggcgggctgctcttcatccccgccctgctggct
gacgtctgctggtgcggctccatcctggctgctctcggcacgaccttgactgtcatcctt
ggactggacgtcaacgtgtcaatcatcatatcagccgccatcgccgtttcctacacgctt
ttcgggggactgttctctgtcatctacactgacatcatccagctgatttgcatattcatc
ggactgtggatttccgtcccatttgccataaccaaccccctggtgtccaacatcgggaac
accacgtggactcggatcttgtacacacctatcaacgattcgtccgtgaacgtcacaagc
ttcaacgagacagagacgtacggctggtacggcgaatgggacatgaagagatccggatat
tggatagaccatgccttgctgctggtgtttggtggtattccgtggcaagcctacttccaa
cgtgtcctctcctccaagtctcctgcgcgtgcgcagtggctgtccatcgcagcaggcatt
ggttgtttcctgatgtccatcccttctgtactgatcggtgctattggtgcttctacagac
tggcctgcgacgacatacggtaaagacccagccattgagggagagaaaaggatgatactc
ccgttggtcatacagcacttgaccccgacgtgggtggcgttcctcggactcggtgccgtg
tcagctgccgtcatgtcgtccacggactcctcggtcctggcctcgagctccatgtttgcc
aagaacgtctacaagcccctcttcaggcaaaaggcgtcggagacagagatagtgtgggtg
atgcgtgctgccatctttgttgtggctgccttggcttctgttcttgccatcactgtcaag
tccgtttacggactgtttgtgctgtgctcggacttggtgtacgtagtcgtcttcccccag
ctggtgtccgtggtgtacctgaagttcaccaacacgtacggctcgctgtgtggttacatc
atcgggctggtgcttcggctcggaggcggagaagatcttctgcatgttccagccgtcatc
aagtacccatattacgacgagacgacaggaaagcagctcttccccttccggaccctggac
atgatctgcagcttcctgacgatcatcctcgtctcacacttagcgcgcctgctcttcctc
aaggggaagattccgatgaagtacgacatcgcgggatgcttccacacagcggaagaaaag
caggcacctaccagagaatcaaacacggctaacgggaagagtactggggaacaccatgaa
ctagagaccatgaattga
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