Branchiostoma floridae (Florida lancelet): 118428466
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Entry
118428466 CDS
T01074
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bfo03041
]
118428466
Enzymes [BR:
bfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118428466
Spliceosome [BR:
bfo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
118428466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
118428466
NCBI-ProteinID:
XP_035694436
UniProt:
A0A9J7M472
LinkDB
All DBs
Position
13:19049739..19062968
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AA seq
517 aa
AA seq
DB search
MSGRYGHGDGGRRGYGNRGGSPPRFGRGGDRGGGGGGGRPGFGSGYNIGGGSRPSLKGSQ
PGERLRKPKWDLSKLPRFEKNFYREHPNVSNMSQVAAEQYLTERQITVRGREVPKPVTTF
AEGSFPDYVMEEIARSNFEFPTPIQAQGWPIALSGKDLVGIAQTGSGKTLAYMLPAIVHI
NHQPFLERGDGPICVVLCPTRELAQQVQEVAVQFGHSSRIKNTCVYGGAPKGPQLRDLER
GVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTL
MWSATWPKEVRQLAEEFLHEYIQVNIGALSLCANHNILQIIDVVHEHEKDHKLIRLLEEI
MGEKENKTIIFVETKRRVDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRTGRAPILV
ATDVASRGLDITDVKFVINFDYPASAEDYVHRIGRTARSERTGTAYTFFTPNNMKQAKEL
VSVLQEARQQINPKLIEMVDTARGGFGGRGDRRRWRY
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcaggtacggccacggagacggcggcagaaggggatacggaaatcgaggcggc
agccctccgaggttcgggcgcggcggggaccgtggtggtggcggcggtgggggcaggccg
gggttcggctccgggtacaacatcgggggcggcagccgacccagtctgaaggggtcgcag
cccggagagcgtctccgcaaacccaagtgggacctgtccaaactcccgcgcttcgagaag
aacttctacagggagcatcccaacgtttccaacatgtcacaggttgcagcagaacagtac
ctgaccgagagacagatcacagtgagaggccgggaggtgcccaaacctgtcactaccttc
gctgaagggtcattccctgattacgtgatggaggagatcgctcgctccaacttcgagttc
ccgactccgatccaggcgcagggctggcccatcgccctgtctgggaaggatctggtgggg
atcgcacagactggctccggaaaaaccctcgcatacatgctgcctgccattgtccacatc
aaccaccagccattcctggagcgtggagacgggcccatctgtgttgtgctctgcccgaca
cgtgagctcgcccagcaagttcaggaggtggccgtccagttcggacactcctctcgcatc
aagaacacgtgcgtgtacggaggcgcgccgaaaggcccccagctccgagaccttgaacgg
ggagtggagatctgtatcgccacccccggccgactgatcgacttcctggaggccgggaaa
accaacctgcggcgctgtacctacctggttctggacgaggccgaccgtatgctggacatg
ggcttcgaaccccagatcaggaagatcattgaacagatcaggcccgaccgtcagaccctg
atgtggagcgccacctggcccaaggaggttcgacagctggccgaggagttcctacatgag
tacatccaggtgaacatcggcgctctgtctctctgtgccaaccacaacatcctgcagatc
attgatgtggtgcatgaacatgagaaggaccacaagctgatcaggctcctggaggagatc
atgggagagaaggagaacaagaccatcatcttcgtggagacgaagcgccgcgtggacgac
ctcacacgccgcatgcgcagggacgggtggcctgccatgtgtatccatggtgacaagtcc
cagccggagagagactgggtgctcaatgagttccgaactggacgtgcgccaatactggtg
gccactgatgttgcttctcgtggtctagatatcaccgacgtcaagtttgtcattaacttt
gactacccggcctcggcggaggactacgttcaccgcatcgggcgaaccgcccgcagcgag
cgcaccggaacggcgtacacgttcttcacccccaacaacatgaagcaggccaaggagctg
gtgtctgtactgcaggaggctcgacagcagatcaaccccaaactgatagagatggtggac
accgcgaggggcggcttcggaggacggggagatcggcgaaggtggcggtattag
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