Branchiostoma floridae (Florida lancelet): 118428474
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Entry
118428474 CDS
T01074
Name
(RefSeq) nephrocystin-3-like
KO
K19360
nephrocystin-3
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
bfo03037
]
118428474
Cilium and associated proteins [BR:
bfo03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
118428474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
TPR_10
NPHP3
TPR_7
TPR_1
NPHP3_hel
TPR_2
TPR_8
TPR_MalT
TPR_16
TPR_14
NPHP3_N
TPR_19
AAA_16
AAA_22
DUF2225
NACHT
bZIP_1
TPR_11
KAP_NTPase
ARM_TT21_4th
TolA_bind_tri
MIT
OmpH
GAS
ATG14
Shugoshin_N
ATPase_2
BRE1
ANAPC3
Consortin_N
CENP-Q
INO80F
Herpes_BLRF2
Cep57_CLD_2
Motif
Other DBs
NCBI-GeneID:
118428474
NCBI-ProteinID:
XP_035694450
UniProt:
A0A9J7M8B6
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All DBs
Position
13:8821832..8844129
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AA seq
1316 aa
AA seq
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MGTSSSLLRSRESLEELTDGVYLDGNLDIPNEVKPRHALLRSVGSFGRRMKGASFRSNAS
VDLMENPEAERIRKEYEMFRYSKQSEIQDMQKKMEKLENENKRLRGELQALQKTVSKLRN
ERDAALNREYQALERAATFENDRDKVQRQFKIFRETKESELQDLLQAKRDLENRIVKFAT
DEGTHVISDNMSDNLSYSGTVDGGLLGNPGDWGTALGSEPSLGSTVQMQLAVKGPELATS
LIDLDGPFTNINKDDWTAAVSSLSQITPLLAQTLPSCVFKIFISAPSDMCEEVQILYKNH
LPALQYKCACDGRVLVTVHFTEEPWHEENPQTLWKLQNARKKQIQGCSLFLGLLAEQVDR
YTVEDFEMSHLTNPGSRPALFCFRDTTKPGGKSGSVVEEVAMLKKRVRDSVPCKIIEDYV
EPKVGAKMLFDEIAKIVQMELGVGETEEGDSGDEREDEASCFTWLDPDGNYEQMELFNSL
TSTCADIGFEKYYKQLNELVSAPGPMPPLLLMGTIGAGKSSLLAQWIKQLQQRSPPCLVL
YHFVGYQSSSSADAVHMIRSFTAQLMQHVMTPPHLPSDPSLLLDEFLRWLEKVSSKQPGG
LVLVIDSMDKFQHAESHTKFLLDPLPVDTRVVVSVTEQTCPQAWRSWPTVVLEPLNPGDI
KQVIQARWTTPRFSLTGSQEARFLAHCHIPACCSPLYVNTFLNQLMSCQNEDMMSEVLEE
CLKTPSVSELYLLILQALEDECPGHHHKSLFGKVMLALRACRNGLSEPELMAIVPDLTWS
VWSLLWDMLSEGGVLCCRSGLITFTNQEAQDAVDRKFLSSNKDLKQTRQKLVDYFSTFIR
PVQTWWRAVDEAPWLLQVLGDVQHLHAILVNLSVFQNLYTRGRCAELLAYWQFVGAEKSA
MATEYMNALKMLEDGMGDVTSSKLASLYELLGKFLKDLSLLNQAVPPLQRALELRETSLD
PDHPSVASALHHLAGLYAHWGKFNTAEALYKQAIDIYQNAFGSNHHQVARELEALALLYQ
RQNKFDVAEPLHKRAVTIRKRSPENSRLRSAGLEFLRKRAVHLEELSLGPDSPALARSLN
ELGVLFYLQGYLGTAEKLLQHSLSMRESVLDASHPDCAQSLHNLASLYVEKKEYAKAEPL
YERALELRQQAFPADHPAVASTIRHLAAVYKKQNNFDKAEPLYRQALAMREKVFGDSHPS
VATALVNLAVLQSNQGRHSDALPLYEKALQIYEDNFGPNNPRVAETLRNLAVLHYDLKNY
ETAANLYKRATEIKDPDHPFQPSREVMSRRSSSVVSENFLHNGLNVQLARLLPEHR
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atggggacgagcagttcccttctccgcagccgcgaatcgctggaggagctgacggatggc
gtatacctggacgggaacctggatattcccaatgaggtcaagcctcgccacgccctactc
cgctctgtcggttccttcggacggagaatgaagggcgccagcttccggtccaacgcgtcg
gtggatctgatggagaacccggaggctgagcgaatcaggaaggagtacgagatgttccgc
tacagcaagcagagcgagatccaggacatgcagaagaaaatggagaagctggaaaatgag
aacaagagattacgaggagaactacaggcattacagaagactgtatccaagttgcggaat
gagagagatgctgccctgaacagggagtaccaggcactggagagggcagccacatttgaa
aatgaccgagataaagtacagaggcaattcaagatattccgtgagaccaaagagagtgag
ctccaggacttgttgcaggccaagcgagacctggagaacaggattgtgaagtttgccaca
gacgagggcacacacgtcatatctgataacatgtctgataacctgtcctatagtggcact
gtggatggaggtttactaggtaaccctggtgactggggtacggccctgggaagtgaaccc
tctttgggcagcactgtgcaaatgcagctggcagtcaaggggccagaactggccacaagt
ctcatcgacctggatggaccgttcaccaacatcaacaaggatgactggacggcagcggtg
tccagtctgtcacaaatcaccccactcctggcccagacactcccaagttgtgtctttaag
attttcatctcagctccttcagacatgtgtgaggaggtacagattctgtacaagaaccac
ctacctgctctacaatacaaatgtgcgtgtgatggtcgagttttagtcacggtgcatttt
acagaagaaccgtggcatgaagagaacccacagacactttggaaactacaaaatgcaaga
aaaaagcagattcagggctgcagtctgtttctggggttactagcagaacaagttgacagg
tatacagttgaggactttgaaatgagccacctgacaaatccagggtctcgtcctgcctta
ttctgcttcagggatacaacaaaacctggtggcaagtctggttctgtggtggaagaagta
gctatgttgaagaagagggtgagagacagtgtgccatgtaagatcatagaagactacgtt
gagccaaaagtaggtgccaagatgctgtttgatgagatagccaaaatcgtccaaatggag
ttgggtgttggagagacagaggagggagacagtggagatgagagagaagatgaggccagc
tgtttcacctggctggaccctgatgggaactatgagcagatggaactcttcaacagtctc
acctcaacatgtgcagacattggctttgaaaagtactacaaacagttgaatgagttagtg
tcagcaccagggccgatgcctccccttctgttgatgggaacaatcggtgcaggcaagtca
agcctactggctcagtggataaaacagctccagcagcgcagccccccctgcctggtgctg
taccactttgtcgggtaccagtcttcctccagtgctgatgctgtacacatgatccgctcc
ttcacagctcagctgatgcagcatgtgatgaccccgccacacctccccagtgaccccagt
ctgttactggacgagtttctccgctggctggagaaggtgtcgtccaaacagcccggcggc
ctggtgctggtcatcgactccatggacaaatttcagcatgcagagtcccacactaagttc
ctgttagaccctttacctgtggacacaagagtcgtggtgtcagtcacagagcagacctgt
ccacaggcttggagatcatggccaactgttgtcttggaacctctgaacccaggagacatc
aaacaggtgatccaggccaggtggacaaccccaaggttctcactcacagggtcccaggaa
gccagatttctggctcactgccatatcccagcatgctgtagtcccctttatgtcaacacc
ttcctgaaccagctgatgagttgtcagaatgaagacatgatgtcagaagtgcttgaggag
tgtctgaagacgcccagcgtgtcggagttgtacctcctcatccttcaggcactagaagac
gagtgtcccggccaccaccacaagtctctctttggaaaggtgatgctggccctgcgagcc
tgtagaaacggcctgtctgaaccggagctgatggccatcgtgcctgacctgacgtggtcc
gtgtggtccctcctgtgggacatgctgagtgagggaggtgtgctctgctgcaggtccggc
ctcatcaccttcacaaaccaggaggcacaagatgcggtggacagaaaattcttgagcagt
aacaaagacctgaaacagactcggcagaaactggtggattacttttccacttttatcaga
cctgtgcagacctggtggcgagccgtggacgaggccccgtggctgctgcaggttttaggc
gatgtacaacatctccacgctatcttggtcaacctcagtgtcttccagaacctctacacc
agggggcgctgtgcagagctgctggcctactggcaatttgttggtgcagagaaaagtgcc
atggcaacagagtacatgaatgcactgaagatgctggaagatggtatgggcgatgtgaca
tcctcgaagttggccagcctgtacgaactcctgggaaagttcctgaaagacctgagcctg
ctgaatcaggcggtgcctcccctccagagggcattggagctacgagagactagtctggac
ccagaccaccccagcgtggccagcgcgctccatcatctagccggcttgtacgcacactgg
gggaagtttaacactgccgaggccctgtacaagcaggctatcgatatctaccagaatgcg
tttggcagtaaccatcatcaggtagcccgggagctggaggcccttgccttgctgtaccaa
cgccaaaacaagtttgatgtagctgagccacttcacaagagagctgtcaccatcaggaag
agatcaccagaaaattcccgactgagatctgctgggctggagtttctgcggaagagagca
gttcacctggaggagttgtcgttaggtccggattccccggccttggctcgctcactcaat
gaactaggagtgctgttctacctgcaggggtacttgggaacagctgagaagttgttgcag
cactccctgtccatgcgggagtctgttctggacgcctctcatcccgactgtgcgcagtcc
ctgcacaacctggcttccctctatgttgagaagaaggagtacgccaaagcagaaccgctg
tacgagagagcgctagagttacgccagcaggcctttcctgcagaccaccctgctgttgca
tcgactatccgccatcttgctgcagtctataagaaacagaacaattttgataaagcagag
cctctgtacagacaagccttggctatgagagagaaggtgtttggagacagtcaccccagt
gttgccacggcactggtcaacttggcagtgctacagtccaatcagggaagacattccgat
gcattaccactgtacgagaaagcattgcagatatatgaggacaacttcggcccaaacaac
cccagagttgcggagaccctacgaaacttggcggtgctgcattacgacttaaagaactac
gagaccgccgcaaacctgtacaaacgggccacggagatcaaagaccccgaccacccattc
caaccgtcgagggaagtgatgtcccgacggtcgtcaagcgtagtctcagaaaactttttg
cacaacggtctgaatgtacagctagcccggctgctaccagagcatagatag
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integrated database retrieval system
