Branchiostoma floridae (Florida lancelet): 118428477
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Entry
118428477 CDS
T01074
Name
(RefSeq) spastin-like
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118428477
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bfo04812
]
118428477
Enzymes [BR:
bfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
118428477
Membrane trafficking [BR:
bfo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
118428477
Cytoskeleton proteins [BR:
bfo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
118428477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
MIT
Vps4_C
AAA_22
TIP49
AAA_5
AAA_14
IstB_IS21
Mg_chelatase
AAA_16
NPHP3_N
AAA_17
AAA_2
nSTAND3
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
118428477
NCBI-ProteinID:
XP_035694453
UniProt:
A0A9J7M4R9
LinkDB
All DBs
Position
13:9162653..9164137
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AA seq
494 aa
AA seq
DB search
MMSRKTGEEDPVVTKQKSYQKKAFEFISRALTIDENSGQKHQAIYLYRKGINELEKGISL
ESRGCEFTKRREKMLSNVDMIRDRLHLLETLLVSGSEKLDKTSGRANESDKSTKPTLTGV
NALVPNKVKPMTNKSSIFSRGVVVHSYGGSGSSSSHSSQPPRSLHSKGSRENRVPGKTTA
STRVKTPSKKKLTSLKNVDSRLANIILDQIIDSAPSVNWDDIAGQGVAKQALQEIVILPS
LRPELFTGLRAPVRGLLLFGPPGNGKTMLAKAVASESNATFFNMSASALTSKWVGESEKL
VKALFSVARELQPSFIFLDEIDSLLCARKEGEHDASRRLKTEFLLEFDGVCSESDDRILV
MGATNRPEDLDDAVVRRFAKRVYVKLPELETRVAIISKLLEKHHSPLNQNELENLARQTD
GYSASDLTNLAKDAALGPIRELEPTQVKSLPASQIREIRYSDFSDSLKRIRSSVAQNSLL
SFEQWNSYYGDMTT
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcaggaagacaggagaagaggacccggtagtcacaaagcagaaatcttaccag
aaaaaagctttcgagttcatctctagagcccttacgatcgacgaaaactcaggacagaag
catcaagccatctatctataccgaaagggcattaatgagttggaaaaaggcatatctttg
gagagcagagggtgtgagttcacaaagcgccgagagaagatgctaagtaacgtagacatg
atcagagatcgattacatctgctagaaaccctgcttgtttctggctcagagaagcttgat
aaaacttccgggcgtgccaacgagtctgataaatctaccaaacccacacttacaggagtg
aatgcacttgtgcccaataaggtgaaaccaatgaccaacaaaagctcaattttctcaagg
ggcgtcgtggtacacagctatggagggagtggcagcagtagcagtcacagctctcagcct
ccgaggtcgctccattcaaaaggtagcagagaaaaccgagtccctggaaagaccacagcg
tctacgcgagtcaaaacaccgagcaaaaagaaactaaccagtctgaaaaatgtggactcc
agattggcaaacatcatcctggatcagattattgacagtgcgccctctgtgaattgggat
gatattgcagggcaaggtgtagcgaagcaagccctgcaagagatcgtcattctaccatct
ttaaggcctgagctatttacgggtttaagggctcctgtccgtgggctcctgcttttcgga
ccaccgggcaatggaaaaacgatgctggctaaagctgtggctagtgaatccaatgcaaca
ttcttcaacatgagtgcttccgcactaacatctaaatgggttggagaaagcgagaagctg
gtgaaagctctgttttctgtggccagagaactgcagcctagttttattttcctggatgaa
atcgattcgttgttgtgtgcgagaaaggagggagaacacgatgccagtaggagacttaaa
acagaatttctcttggagtttgacggggtatgcagtgaaagtgatgaccgaatccttgtt
atgggggcaactaaccgaccagaagacctagatgacgctgtcgtaaggaggtttgctaaa
agggtctacgtgaagctgccagaactagagacgagagttgctatcatttctaaacttttg
gagaagcaccacagccccctcaatcaaaatgagttggaaaacttagcaagacaaactgac
ggctattcagcaagcgacctgacaaacttagccaaggatgcagcactgggaccaataagg
gaattggaacctacccaagtgaaatctttgccagcatcccaaatacgtgagataaggtac
tcagacttttctgactccctgaagagaatacgttctagcgtagctcagaactctctgtta
tcctttgagcagtggaacagctattatggggacatgacaacctaa
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