Branchiostoma floridae (Florida lancelet): 118428630
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Entry
118428630 CDS
T01074
Name
(RefSeq) TATA-binding protein-associated factor 172-like
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfo03021
]
118428630
Transcription machinery [BR:
bfo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
118428630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
TOR1L1_N
HEAT_EZ
HEAT_2
TPR_Trm732_C
DUF6650
Arm
Motif
Other DBs
NCBI-GeneID:
118428630
NCBI-ProteinID:
XP_035694629
UniProt:
A0A9J7M662
LinkDB
All DBs
Position
13:complement(20259241..20295336)
Genome browser
AA seq
1890 aa
AA seq
DB search
MATRLDRLFTLLDTGSTPVIRKSAALQIGQVQKLHPHELHNLLAKVLTFLRSDNWDTRIA
AGQAIEAIARNVPLWEPRGVVKKEEDPCEGRSTPVRDRSDKLEFSRFDITRVLQKGSALL
GSAGTEFDVDENELAAMDPKECLTCSSLSLSAMDPKERLVYQKKQIHKRLGLDVAGAVGV
DTQQFFQDEDLVMRPELNSHAQRQQRIQLSAADAVAQEMAAVKPGMSAREKNRAKRKAKS
LAKQRSKDIQEGVPDLSSNSQSQGEEPDPKRKRTTAVLVDQPADADRVVMDQVLDSSVMF
EESEDWPFESFCEVLLNDLFSPSWEVRHGAGTGLREIAKTHGKGAGRTADAPAEQLDSSN
QQWLEDVALRLLCVFSLDRFGDFVSDEVVAPVRETCAQTLGAVLHHMTSEGVKGVLGILM
QLLEQPQWEVRHGGLLGLKYLLAVRKELVEATLPSIVPAIVQGLQDSVDDVVAVAAASIV
PVVDSLVKILPLQVPGIVEILWDALLELDDLTASTNSIMLLLASLLTYPGVTAQTSCGAV
LTTLVPRLWPFLHHTIPSVRKASLETIHTLLVSDSPQAPCSDWLPPLLQDALRHVYQRSI
TETKDTILEIVQKVWLKLLEKAPLEYLVAAACPWLSAWLCLAMQPAQVQIDSTMLVDSRM
KGKERGPSTPRSRTAPIIKEVREYIGGAESVTMDTPQSRDHCVIKARLTAVRLLGCLSSY
IGQPLPTLQPGETAPVDSLGQLLCFHLSGKSAIQRMVAALVVRNWAEFQQAHSQDSCCPL
AVRQRLQEVLTENLYYDEITTQFTTMQTECRAFLTALQACGCPVDSMARQGSLLTVEQAS
ALAATHCSQAVMPNQLQRLEGRRSQLQAAVQETGAEHGLHHLRVQCSVAGALVSLRLLPD
KLNPVIRPLMDTLKREDNSLLQESAARSLAMLLEQTMTRTPCPNPKITRNLRGFACADCV
QTPLVTQPLQPIREPASRPASPVCGSPAATPSPSGRGTPPVFPPGTEGVSKTSGILTLVR
QQRDAAIATASRRGGRGRKNLGLKVDMEAILAEDDEAQKQAAVQVRGAGLVLTQIARHFG
SGLTSALPNLWEATVGALSSVNLPADADSTHDGPAQDLVNALQVVEVMGPALHQQLHTQL
IQALPQLCTCLRHPYTAVRHMAARVLGMLSKVVTVETMNLVLGHVIPMLGASEEVQREGA
MEALSYIVEKLGVVMIPYIVLLVVPVLGRMSDQTECVRLLATQCFATLVRLMPLEAGIPN
PPDMSADLIEKKAEERRFLEQLLDNSRVDNYLVPVPIQAELRKYQQDGVNWLAFLNKYKL
HGILCDDMGLGKTLQSLCIVAGDHYHRAAEYRKSRHADCAPLPSIVVCPPTLTGHWVYEV
EKFVSLEHLNPLHYTGPPSERNRLRSRVKKHNLVVVSYDIVRNDIDFFRTIQWNYCILDE
GHIIKNGKTKISKAVKQLQANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFMAKY
GKPILQSRDAKSSSKEQEAGALAMEALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCELS
QLQVQLYEDFAKSQARKGVEDSITMATADEEEKPKRTTHIFQALQYLQKVCNHPKLVLSC
SHPEFQQVALQLKAQQSSLDDIQHSAKLTALRQLLLDCGIGVPDSGQTSDLLSDAVVGQH
RALVFCQLKSMLDILEKDLLKAHMPSVTYLRLDGSIPAGARHSIVNRFNNDPSIDLLLLT
THVGGLGLNLTGADTVIFVEHDWNPMRDLQAMDRAHRLGQKKVVNVYRLVTQGTLEEKIM
GLQKFKLNIANTVISQENSSLRSMGTDQLLGLFTLDERKEREEGGRTAGAGNAHGSGEGM
KGVMEGLGELWDQAQYETEYDLGSFVQSLT
NT seq
5673 nt
NT seq
+upstream
nt +downstream
nt
atggctaccagactggaccgcctgttcaccctgctggacacgggttcgactcccgtcatc
aggaagtccgcagcgctgcagatcggacaggtgcagaagctgcatccacacgagctgcac
aacctgctggctaaggtgctgacattcctgcgcagtgataactgggacaccaggatcgct
gctggtcaggccatcgaggctatcgccaggaacgtaccactgtgggagccacggggggtg
gtcaagaaggaagaagacccctgtgaaggcaggtccacgcctgtgagagaccgcagtgac
aagttggagttctccaggtttgacatcacacgagtgttacagaagggctccgcactgtta
gggtccgctggcactgagttcgacgtggacgaaaatgaacttgcagccatggatccaaag
gagtgcctgacatgttcctccctgtccctttcagccatggatccaaaggagcgcctggtg
taccagaagaaacagatccacaagcggctgggtctggacgtagcgggcgcggtgggcgtc
gacacacagcagttcttccaggacgaagacctggtgatgaggccggaactcaacagtcac
gcacagaggcagcaacggatacagctgtctgcagcggatgcagtagcccaggagatggca
gcagtgaagcctggcatgagcgcgcgggagaagaaccgagccaaacggaaagccaagtca
ctcgccaagcagaggtcaaaggacatccaggagggtgtgcctgacctcagttccaactcg
cagagccagggggaggagcctgatcccaagaggaagagaaccacagctgtcctggtggac
cagccggctgatgcagacagggtcgtcatggaccaagtactggacagcagcgtcatgttt
gaggagtcagaagactggccctttgagtccttctgtgaggtgctcctcaacgacttgttc
agcccaagttgggaggtgagacacggggcaggtactgggctcagggagatagcaaagact
catgggaagggtgctggtaggacagctgacgcccctgccgaacagctggacagcagtaac
cagcaatggttagaagacgtggccctgagactactctgtgtcttctccctggacaggttt
ggggactttgtgtccgacgaggttgttgccccagtgagagaaacatgtgcccagacacta
ggggccgtgctgcatcacatgacctccgagggtgtgaagggggtcctgggaatcctgatg
cagctcctggagcagccccagtgggaggttaggcatggggggctcctggggctcaaatat
ctactggctgttaggaaggaactggtggaggccaccctcccctccatcgtcccggcgatc
gtccagggtctccaggacagtgtggatgatgtggttgccgtggcagcagccagcatcgtc
cctgtcgtcgactctctggtcaaaatactcccgctgcaggttcctggcattgttgagatc
ctgtgggacgcgctgttggagctggacgacctgacagcatccactaacagcatcatgctg
ctgctggcctccctgctgacctatcctggggtcacagcacagacaagttgtggagctgtg
ctgacgacattggttccccgtctgtggccgttcctacatcacaccatcccctccgtcagg
aaggcctccctggagaccatccacacactcttagtctccgacagcccccaggcgccctgc
tctgattggctgccgccgctgctgcaggacgccctgcggcacgtgtaccagcgcagcatc
acagagactaaggataccatcctggagatcgtacagaaggtgtggctgaagctgctagag
aaggctcccctggagtatctggttgcagccgcctgcccctggctcagtgcctggttgtgt
ctggccatgcagccggcgcaggtgcagatagactccaccatgctggtagacagccggatg
aagggaaaggaaagaggaccttccacaccccggagccgtacagcccccatcatcaaggag
gtccgggagtacatcggaggggcggagtctgttaccatggataccccgcagtccagggac
cactgtgtcatcaaggcacgactcactgctgtcaggttgttgggttgcctgtcatcatac
atcggccagcccctgcccactttacagccgggcgagacagcaccggtggacagccttgga
cagctgctgtgcttccacctgagtgggaagtctgctatccagcggatggtggctgctctg
gtggttaggaactgggctgagtttcaacaggcccacagccaggatagctgctgtcccctg
gctgtgagacagcggctacaggaggtgctgacggagaacttgtactacgatgagatcacc
acacagtttaccactatgcagacagagtgcagggcgttcctgactgccctccaggcctgt
ggatgtcctgtagactccatggccagacaggggagcttactgaccgtggagcaggcctct
gccctggctgcaacccactgcagtcaggcggtcatgcccaaccagctacagaggctggag
ggtcggaggtcccagctgcaggcggcggttcaggagaccggtgcggaacacggcctgcac
cacctgcgggtccagtgcagcgtggccggcgcgctcgtgtcactccgactcctgcccgac
aaactcaaccctgtcatacgtccgctcatggacaccctgaaaagggaggacaactcactg
ttgcaggaatctgctgctagaagtcttgccatgctgctagaacagaccatgacccggacc
ccctgtccaaaccccaaaatcacccggaacctgcggggcttcgcctgtgcagactgtgtg
caaactcctctggtcactcagccactacagcctatcagggaaccggcatccagaccagcc
agcccagtatgcggctccccggcagccaccccctccccctcgggcaggggtacccctcct
gtattcccccccggcacggagggggtgtccaagacctcaggaatcctgacgctggtgcgg
cagcagagagacgctgccatagcaacggccagcaggcgaggggggcggggcaggaagaac
ctagggttaaaggtcgatatggaggcgattctggctgaggatgatgaggctcagaagcag
gcagcagtgcaggtacgcggggcagggctggtgctgacacagatcgccaggcacttcggc
tcggggctgacctccgccctgccgaacctgtgggaggccactgtgggggcgctgtcctca
gttaaccttcctgctgatgcagactctacccatgacggcccagcccaggacctggtgaat
gcactacaggtggtggaagtgatggggccggccttacatcaacaacttcatacacagttg
atccaagcgttgccgcagctatgcacctgtctgcgccacccttacaccgccgtcaggcac
atggcggcccgggttctgggcatgctcagtaaggtggttaccgtggagaccatgaacctg
gtgctgggtcatgtgatccccatgctgggggcgtccgaggaggtccagagggagggagcc
atggaggcactcagctacatagtagagaagctaggtgttgtgatgatcccctacatcgtg
ctgctggtggtgccagtactcggcaggatgagcgaccagacagagtgtgtgcggcttctc
gccacgcagtgcttcgccacactggtcaggctcatgccactggaggcagggatcccaaac
cctcccgacatgtcagcagacctgatagagaagaaggctgaggagaggaggttcctggaa
cagctgctggataactccagggtagacaactacctggtgcctgtccccatccaggctgaa
ctcaggaaataccaacaggatggcgtgaactggctggcgttcctgaacaaatacaaactg
cacggcatcctgtgtgatgatatgggtctggggaagacactgcagtctctgtgtatagtg
gcaggggaccactaccatagggcagcagagtataggaagtcccgtcacgcggattgtgcc
cccctcccctccatcgtggtctgcccccccacactgacgggacactgggtgtacgaagtg
gagaagttcgtgtccctggagcacctcaaccccctgcactacacgggacccccctccgag
aggaacaggttaaggagcagagtgaagaaacacaaccttgtggtggtatcttacgacatt
gtcaggaacgacattgacttcttcaggaccatccagtggaactactgcatcctggatgaa
gggcacatcatcaagaatggtaaaacgaagatttccaaagctgtgaagcagttacaggcc
aaccacagactgatactgtccggcacacccattcagaacaatgtcctggagctgtggtcg
ctgtttgacttcctgatgccaggatttctgggtacagagaagcagttcatggccaaatat
ggcaagcccatcctgcagtcccgtgatgccaagagctcctccaaggagcaagaagcaggt
gccctagccatggaggcactccaccgacaggtgctgccgttcctcctgaggaggatgaag
gaagatgtcttacaggacctgcctcccaaaatcatccaggactactactgtgagctcagc
cagctacaggttcagctgtacgaggactttgccaagtcccaggccaggaagggcgtggag
gattccatcaccatggcaactgcagatgaggaggagaagccaaaacggacaacgcacatt
tttcaggctttgcagtacctacagaaggtgtgtaaccacccgaagctggtgctgtcctgc
agtcatcccgagttccaacaggtggcgctacagctaaaggcacagcagtcctctctggat
gacatccaacactcggccaaactgacagctctcagacagctcctgttggattgtgggatc
ggagttcccgacagcggccagacgtcagacctcctgtcggacgctgtggttggtcagcac
cgggccctggtgttctgccagctcaagagcatgctggacattctggagaaggacctccta
aaagcccacatgcccagtgtgacgtacctcaggttggatgggtccattcctgcgggggcc
agacattccattgtcaacaggtttaacaacgacccctccatcgacctgctgctgctgacg
acccacgtgggtgggttggggctgaacctgaccggggcagacacagtcatctttgtggag
cacgactggaaccccatgcgagacctccaggcaatggaccgtgcccatcggctgggacag
aagaaggtggtgaacgtttacagactcgtcactcagggaactctggaggagaaaatcatg
gggctgcagaagttcaagttgaacatcgccaacacggtgatctcccaagagaactccagc
ctgcggtccatgggcaccgaccagctcctcggcctcttcactctggacgaaaggaaggag
agagaggagggagggaggacagcaggggcagggaacgcgcatggaagtggcgagggcatg
aagggggttatggagggactgggagagctgtgggaccaagcgcagtatgagacggaatat
gatctgggcagttttgttcagtccctgacttag
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