Branchiostoma floridae (Florida lancelet): 118428651
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Entry
118428651 CDS
T01074
Name
(RefSeq) leucine-rich repeat protein SHOC-2-like
KO
K19613
leucine-rich repeat protein SHOC2
Organism
bfo
Branchiostoma floridae (Florida lancelet)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
LRR_9
LEDGF
Motif
Other DBs
NCBI-GeneID:
118428651
NCBI-ProteinID:
XP_035694653
UniProt:
A0A9J7M5F9
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Position
13:complement(20790428..20799096)
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AA seq
714 aa
AA seq
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MEVKNDPDEEPDLTADRSLQTVLSSFQNQQLSPSNNVEKEENHLLCLKSLDLSSFPESVL
NLTHVEKLILDHNSLTFLPGELCHTLTHLCVLSVMGNDLETLPTLFGNLTLLRELHAGEN
CLQELPDSFSDLKDLRLLYLTGNELRTLPSDFGHLEHLETLMIDENHLKKLPKTFGSLRR
LERFDASNNKLETLPESFGGLSRLKILNLSTNKLSCLPESFGDLPQLQEVELSGNSLSFL
TKDLKSSHCLRKLYVDNNVLKELPPWVGHLSSIQEMSLRDNKLMNQPLPESFPARSGRTL
RLLDLSGNFITALPASLGQLGSLESLHLGSAIGELERRHFQNGNWLCALPENFGRLRHLK
TLHLDENQLTHLPGSFGSLGSLEFLDVGQNWLKELPDSFCELSNLQFCQLSKNHLQLLPS
NFGRLSSLVDLRLDNNMLGELPESFAELRQLRTLDLFCNELREVPGALKHLTSITRLDMD
KNKFSLPPELVPNIIFKPTYAARDPRLKDTWRGRNRADRNKVEVVKLEPLPDEEEEVEDE
KDGPIPWNDSILRQAMAKSMSLWRSHTSEEGSHTRVEGSHTKVEGSYTTEEGSHTRVDGS
HTSVDEGPPAFNSQFSDGGGSTGESTGTTTPESPVSPTFPSASFVPETENWEDEIEDTCP
WDTPVFYQHPSRWYKGSSAMQFVPCEDHVEPVARIRFLYTVEDGQFDDAEEDML
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgaagaacgaccctgacgaggaaccagacctcaccgccgaccggagccttcaa
accgtcctgtccagtttccagaaccaacaactctcaccaagcaacaatgtagagaaggag
gagaaccatctcttgtgtctgaagtctctggatctgtcttctttccctgagtctgtctta
aacctgacacatgttgagaagttaatactagaccataacagtcttaccttcctacctggt
gagttatgtcacaccctgactcacctgtgtgtcctctctgtcatgggaaacgaccttgag
acactccccaccttatttgggaacttgaccttgctaagagaactccacgccggcgaaaac
tgtctccaagaacttcccgattccttctcagatctgaaagacttgagactgctttacctg
actggcaacgagttgaggacgttaccttctgacttcggtcatctagaacacttggagact
ttgatgattgatgagaatcacctcaagaagttgcccaagacgttcgggtctttaaggagg
cttgagagattcgacgcctccaacaacaagttggaaaccttgccagagtcattcggggga
ctttctcgtcttaaaatcttgaacctcagtactaacaaactgtcttgccttcctgaaagt
tttggagatcttccgcaacttcaagaagtggaactgtctggaaactccttaagtttttta
accaaagacttgaaatcttcccactgcttaaggaaactgtatgtagacaacaatgtgctg
aaggagttacctccttgggttgggcacctgtcatcaatacaagaaatgtcactgagagac
aacaagttgatgaaccagccgctcccagagtccttcccggcgcgcagcgggcggacgtta
cggctgctggacctgagcgggaacttcatcacggcgctacccgcctcgctgggtcagctg
gggtcgctggagagcctccatctggggagtgccatcggagaactggagcggagacacttc
cagaacggaaactggctctgcgcccttcccgagaacttcggcaggttgagacacctcaag
acgctccaccttgacgagaaccagctcacgcaccttccgggcagtttcggcagtcttggc
agtctggagttcctcgacgtggggcaaaactggctcaaggaactccccgattccttctgt
gaactaagcaacctgcagttctgtcagctgtccaaaaaccacctgcagctgttgcctagc
aacttcggccgcctgtcgtcgctcgtcgacctccgcctcgacaacaacatgctgggggag
ctcccagaatcctttgcagagctccggcagctgcggacgctggacctgttctgtaacgag
ctgagggaggttcccggggcgctgaaacacctgacaagtatcacacggctcgatatggat
aagaacaagttcagcctaccccctgagctggtgcccaacatcatcttcaaacccacctac
gcagccagggaccctcgtcttaaggacacttggcggggaaggaacagggctgacaggaac
aaggtcgaggtggtcaagcttgagcccctgcctgatgaagaggaggaagtggaggatgag
aaggatggaccgatcccctggaacgacagcatcctgagacaggccatggcaaagagcatg
tcactctggaggtctcacaccagcgaggaggggtctcacactagggtggaggggtctcac
accaaagtggaggggtcgtacaccacggaggaagggtctcacaccagggtggatgggtct
cacaccagtgttgatgaagggccaccagcatttaacagccagttttcagatggcggaggc
agcacgggggaaagcacaggcacaaccacacccgagtctccagtgtcccccacattccca
tcagcctcctttgttcctgagacagaaaactgggaagatgaaattgaggacacctgtcct
tgggacacgccagtgttctaccaacatccttctcgctggtacaagggctcgtccgcgatg
cagtttgtgccgtgcgaggatcatgtggaaccggttgccaggatacgcttcctgtacaca
gtagaggatgggcagttcgatgacgcagaagaagacatgttgtga
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