Branchiostoma floridae (Florida lancelet): 118428714
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Entry
118428714 CDS
T01074
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2-like isoform X1
KO
K17908
autophagy-related protein 18
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04136
Autophagy - other
bfo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118428714
04136 Autophagy - other
118428714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118428714
03029 Mitochondrial biogenesis [BR:
bfo03029
]
118428714
Membrane trafficking [BR:
bfo04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
118428714
Mitochondrial biogenesis [BR:
bfo03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
118428714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
DUF7165
WD40_Gbeta
VID27
Beta-prop_IFT140_1st
BCAS3_WD40
Beta-prop_NWD2_C
Beta-prop_RSE1_2nd
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
118428714
NCBI-ProteinID:
XP_035694755
UniProt:
A0A9J7M5W7
LinkDB
All DBs
Position
13:18336885..18349194
Genome browser
AA seq
466 aa
AA seq
DB search
MNLAGQGGDNSAGLLFVNFNQDCTSLAVGSKTGYKLHSLNSVDKLDVIYENAESEDVCIV
ERLFSSSLVAIVSLSAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRLRLIVALEESLYI
HNIRDMKVLHTIRDTPPNPLGLCALSINNDNCFLAYPGSAQIGEVQVFDTVNLRAVTMIP
AHDSPLAALQFNAPGTKLATASEKGTVIRVFSIPDGQKLFEFRRGVKRCVSIYSLAFSMD
SVFLCASSNTETVHIFKLEGPKEKTPAGTEEPQSWMGYFGKALMGAGSYLPTQVSDMFNQ
GRAFAIVKLPFAGLKNICALAIISKLPRLLVASADGYLYIYNVDPADGGECMLLKQHRLD
GRTDGTESSESLTSAPRDKPLTAAAGPSYAAKVMSSQPQSSPPKEASPPKDDLYHYGGSP
QSGGAVGGPQFPSGAPPYLADEDTRDLTGLRLDDENEFPPMTHHND
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttgccgggcaaggcggggataactccgccggcctcctcttcgtcaacttcaac
caggactgcacatcgttggcagttggctcgaagacgggatacaaactccattcgctgaat
tccgtggacaaattggacgtgatctatgaaaatgcagaaagtgaggatgtgtgcatcgtg
gagcggctcttctcctccagcctggtggccatcgtcagcctgtctgcaccccgcaagctc
aaggtgtgtcactttaagaagggtacggagatctgtaactacagctactccaacactatc
ctggctgtcaagctcaacagacttaggctgatcgtggccctagaggagagcctgtacatc
cacaacatccgtgacatgaaggtgctgcacaccatccgcgacaccccgcccaaccccctg
gggctctgtgccctgtccatcaacaacgacaactgcttcctcgcctacccagggagcgcg
cagatcggcgaggtgcaggtcttcgacacagttaacttgcgtgcggtaaccatgattccg
gctcacgatagccccctagcggctttacagttcaacgcaccaggaaccaaactagcaact
gcttcagaaaagggcacagttataagggtattctccatacctgatggacagaagttgttt
gaatttagaagaggtgttaaaaggtgtgtaagcatctattccctagcctttagtatggac
tccgtgttcctgtgtgcatccagtaacacagaaactgtgcacatcttcaaactggaggga
cccaaggagaaaacgcctgctggaacagaagaacctcagagctggatggggtactttggg
aaggctctgatgggggctgggagttacctgcccacccaagtcagcgacatgttcaaccag
ggaagagccttcgccatcgtcaagctaccgtttgccggcctgaaaaatatttgtgccctc
gcgataataagcaagctcccccgactgttggtggcctcagcagatggttatctgtacatc
tacaatgtggacccagccgacgggggagagtgtatgttactcaaacagcacagacttgat
ggcagaacagacgggacggaatccagtgagtcgctgaccagcgcccctcgggacaaacca
ttgacggcggcggcggggccctcgtatgctgctaaggtgatgtccagtcaaccccagtcc
tcaccccccaaggaggcctcaccacctaaagatgacctgtaccattacggagggagcccc
cagtcgggaggcgcagtggggggaccacagttcccctcaggggcaccgccgtatttggcg
gatgaagacaccagggatctgaccgggctgcgattggacgacgaaaacgagttccctccc
atgacgcaccacaacgactga
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