Branchiostoma floridae (Florida lancelet): 118428739
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Entry
118428739 CDS
T01074
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2-like isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04120
Ubiquitin mediated proteolysis
bfo04137
Mitophagy - animal
bfo04144
Endocytosis
bfo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118428739
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
118428739
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118428739
04137 Mitophagy - animal
118428739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118428739
04121 Ubiquitin system [BR:
bfo04121
]
118428739
03029 Mitochondrial biogenesis [BR:
bfo03029
]
118428739
Enzymes [BR:
bfo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
118428739
Membrane trafficking [BR:
bfo04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
118428739
Autophagy
Mitophagy
Other mitophagy associated proteins
118428739
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
HECT type E3
118428739
Mitochondrial biogenesis [BR:
bfo03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
118428739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
118428739
NCBI-ProteinID:
XP_035694813
UniProt:
A0A9J7M5F6
LinkDB
All DBs
Position
13:16107928..16136804
Genome browser
AA seq
833 aa
AA seq
DB search
MRPRRPESHPGTAPMTSGCQIRHCVGGGSEARRMNGGSHLAMSRPGGPRNGAMKIRLTVL
CARNVSKKDFFRLPDPFAKISVDGSGQCHSTDTCKNTLDPKWNQHYDLFIGKNDSITISI
WNHKKVHKKQGAGFLGCVRIMANAIARLKDTGYQRLDLCKKNPDDNDNIRGQVVVSLMSR
DRGIGDRSAVVDHRGIPTAVCLDANELPEGWEERRTSSGRVQYLNHITRSVQWDRPQRPA
IEYTPSSRDRDRENEERQARRASQLLELQQQQQLQQQLAQQQQQQQQQQQAAAQGESSRN
NGVSRRRSSQRHRNYINRSELHRLELPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRD
LGDISEEDLGQLPPGWEIRHTATGRVYFVDHNNRTTQFTDPRLSSNLHNILNKHQQRQQT
TPPAPPLPQQAPPSLHSCDLHILEQQPPKYKRDLHQKLKNLRAELSQLQPQAGHCRIEVS
REEIFEESYRQVMKMRPKDLRKRLMVKFKGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQ
YSRESDYTLQINPDSGVNPEHLSYFHFVGRIIGMAIFHGHYIDGGFTLPLYKQLLGKPIS
LDDMESVDPDLHRSLIWILENDITGILDNSFCVEQDSFGALQTHELKPNGSDIPVTEDNK
KEYVKLYVQWRFLHGIEAQFLSLQKGLQEIIPPHLLRPFDEKELELMVTGLGKIDIDDWK
AHTRLKHCTPDSTVVKWFWRAVESFDDERRARLLQFVTGSSRVPLQGFKALQGSTGAAGP
RLFTIHQIDASTDNLPKAHTCFNRIDIPPYENYEKLLEKLTCAVEETCGFAVE
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccacggcgtcctgagtcacatccgggcactgcgcccatgacgtcaggctgccag
atccgccattgtgtcggtggtgggtccgaagctcggagaatgaacggcggttcacatttg
gccatgtctcggccaggaggaccgcggaacggggcgatgaaaatacgtctgacagtgtta
tgtgccagaaatgtgtccaaaaaagacttcttcagattaccagacccctttgccaagata
agtgtggatgggtcgggccagtgccactccacagacacatgtaagaacacactggacccc
aagtggaatcaacactacgacttgtttattggcaagaatgactccatcaccatcagtatc
tggaaccataaaaaggtgcacaagaagcagggtgctggcttcctggggtgtgtccgcatc
atggctaacgctattgctaggttaaaggacacagggtatcagagactagacttatgtaaa
aagaatcctgacgacaacgacaatatcaggggccaagtagtagtgagtcttatgtcgcga
gacagagggataggggatagaagtgcggttgttgaccacagagggatcccaactgccgtg
tgtttagatgccaacgagcttccagagggttgggaagagagaagaacgtcgtcaggacgg
gtccagtacctgaaccacatcaccagatctgtacagtgggacagaccacagagaccagcc
atagaatatacccccagtagtagagatagagacagagaaaacgaggaaagacaggctaga
cgggcgagccaacttctagagctgcaacaacaacaacaattgcaacaacagcttgcacaa
caacaacaacagcaacaacaacaacaacaggctgctgctcagggagaatcttctaggaac
aacggagtatcgagacggagatcctcacagagacatcggaactacatcaacagatctgaa
ctacaccgactggagcttcctgagggatatgaacaaagaacgacccagcaggggcaggtg
tacttcctgcacacacagacaggtgtcagcacctggcacgaccctagggtacccagggac
ctgggggatatcagtgaagaggacctgggacagctgccccctggatgggagatccgacac
acggccacaggaagggtatactttgtagaccacaacaacagaacgacccagttcacagat
cctagactgtcttctaatctacataatattctcaataaacaccagcagagacaacagacc
acgcccccagccccgcccctgccccagcaggccccgccctccctccacagctgcgacctg
cacatcctggagcagcagccgcccaagtacaagcgggacctgcaccagaagctgaagaac
ctgcgggcggagctgtcccagctgcagccgcaggcagggcactgcaggatcgaggtgtcc
agggaggagatcttcgaggagtcctacaggcaggttatgaagatgagacctaaggacctc
aggaagagactgatggtcaagttcaagggagaagaagggttggactacggaggagtcgca
agagagtggttgtacctgctttcccacgagatgttgaacccgtactacggactgttccag
tactcccgggagtcagactacacgctacagatcaacccagactcaggagtcaaccctgaa
catctgtcctacttccactttgttgggcggattatcggcatggcgatcttccatggacac
tacatcgacgggggcttcaccctccctctctacaagcagctactcggcaagcctatctca
ctggacgatatggaatctgtggaccctgatctacatagaagtctgatctggatactagaa
aacgatattacaggcattctggacaactccttctgtgtggaacaagactcttttggtgca
ctccagacccacgaactcaaacccaatggctccgacatccctgtcactgaagacaacaag
aaagaatatgtcaagttgtatgtccagtggaggttcctacacggaatcgaggcccagttc
ctgtccctgcagaagggccttcaggagatcatccccccacatctgctcagacctttcgat
gagaaagagttggagctgatggtgacaggcttaggtaagatcgacatcgatgactggaag
gcccacaccaggttaaagcactgcacgccagactccacagtggtgaagtggttctggcgg
gccgtggagtcgtttgatgatgagagaagagcgcgcttactccagtttgtgacaggctca
tcgcgggtccctctgcaggggttcaaggctctacaaggttccacaggggcagcaggcccg
aggctcttcacgattcaccagatcgacgccagcactgataacctacccaaggctcacaca
tgcttcaaccggatcgacatccctccatatgagaattacgagaaactattggaaaaacta
acctgtgctgtggaagagacatgtggatttgctgtggagtga
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