Branchiostoma floridae (Florida lancelet): 118428846
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Entry
118428846 CDS
T01074
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54-like
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bfo03016
]
118428846
Transfer RNA biogenesis [BR:
bfo03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
118428846
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
118428846
NCBI-ProteinID:
XP_035694974
UniProt:
A0A9J7M6T8
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Position
13:complement(9602132..9630514)
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AA seq
548 aa
AA seq
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MENDDRVEEEDYSPRVKAARLSAQELLAHRNLDRTVPPRGGTKDYAPDGSQEQEEKLQGM
YSLYRRMLAEERVNKIGNLSTAIWLEDLGLAEVTVDKGKFWHHIGHTNEGKKYLYPEEAV
FLMETNAIEVYWNKVPLAVQQAYAMMLGNKVSMEQYQVYAHLSRLGYILMRHQSREHFSW
YERQIQLDEYIPLKERIKETSSAQVRDWFPPNQQEEQDSPSSGILQKPDDVNTCGDNIAS
QESDEVKSVSHSPVEHSTSNPMPRDSLVETQALVKKGRNEQSVEDDQMEVQYEDSRKDKT
EKQETKELSSLVLAPQEYKWDFTNINIPNVGQDSDVSEIPIPSTQLLPAGVQVNNVLKIS
TGAFSLNTKRGRKGKSNSEHLSKIIPNLRAEDDPRKVARNWDEYKKLCGVRRTVDMSDTP
VAHLWEGDVTPLVRPSDATDMGAILSKLQVIQNISLEKECSSLPKPDRSLDIAYDVYLPD
SRFKKSKPGRPNLRVCVQRFSDPAPHLALIVQLNQLSSPVPLLWAVVDNGDISFYSFTEA
DLPTDYHM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgatgacagagttgaagaggaagattatagtccgcgggtgaaggctgcacgt
ttgagtgcacaggagctgctcgcccatcggaatttggaccgtactgttccacccagaggg
gggaccaaggactatgccccagatggcagtcaggaacaggaagagaagctccaggggatg
tacagtctgtaccggaggatgctggcagaggagagggtcaataagattggaaacctgtcc
acagcaatctggttagaagatctgggtcttgcagaagtcaccgtagacaaggggaagttc
tggcatcacataggccacaccaatgaaggcaagaaatatctgtatcctgaagaagcagtt
ttcctcatggaaacgaatgccattgaagtgtactggaataaggtaccattagcagtacag
caggcctatgccatgatgcttgggaacaaagtcagcatggagcagtaccaggtgtatgct
cacctgtccagacttggttacatactgatgagacaccagtcaagggaacacttctcgtgg
tatgaacgtcagattcagctggacgagtacatccccttaaaggagcggatcaaggaaacg
tcaagtgcacaagttagggactggtttcctccaaaccaacaggaagaacaagattctcca
tcatcagggatactacagaaacctgatgacgtaaacacatgtggagacaacattgccagt
caagaaagtgacgaagttaaatcagtatctcattcaccagtagaacattcaacctcaaat
ccaatgccaagagattcacttgtagagactcaagcattagtaaagaagggaagaaatgaa
cagtctgtggaagacgaccagatggaagtacagtatgaagacagcagaaaagacaagact
gagaaacaagagacaaaggaattaagctctttggttttggcacctcaagaatacaaatgg
gactttaccaacattaacatacccaatgtgggacaggacagtgatgtatcagagatcccc
atacctagtacacaactcctcccagcaggtgtacaggtaaacaatgttcttaagatcagc
acaggtgcgttctcactcaacacaaagagagggaggaaagggaagtcaaattcagagcac
ctttccaagatcataccaaacttgagagctgaggatgacccaagaaaagtggccaggaac
tgggatgagtataagaagctgtgtggagtgaggaggacagtggacatgtcagacacacct
gtggcacacctgtgggagggagatgtcactccattggtcaggccaagtgatgctacagac
atgggtgccatcttgagcaagctgcaggttatacaaaacatcagtctggagaaagagtgc
agcagcctcccgaaacctgatagaagtctggacatcgcttatgatgtgtatctgccagat
tctcgcttcaagaaatccaagcctggcaggcccaacctcagggtgtgtgttcagaggttt
tcggacccagcaccacacctagcgctgattgttcagctgaaccaactgagctcgcctgtg
cctctcctctgggcagtggtggacaacggagacatctccttctacagtttcactgaggca
gacctgcccactgactaccacatgtga
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