Branchiostoma floridae (Florida lancelet): 118428850
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Entry
118428850 CDS
T01074
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118428850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118428850
03012 Translation factors [BR:
bfo03012
]
118428850
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
118428850
Translation factors [BR:
bfo03012
]
Eukaryotic type
Release factors
118428850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
PAM2
EF-G_D2
G-alpha
Motif
Other DBs
NCBI-GeneID:
118428850
NCBI-ProteinID:
XP_035694976
UniProt:
A0A9J7M592
LinkDB
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Position
13:14983010..15004096
Genome browser
AA seq
584 aa
AA seq
DB search
MDPTNGQYQEPDSWEQVADSGPANTEAPLQIQKPFSSLNINAPDFVPSWLTKTSPSQEQQ
PDAASPAAGSADNAMDVETAAGGDTQEPMDDPEPPPAEPKPGTVDDMAAANGELEEEDEG
ELMEEEEEEEEEEEAAKATAAVKKKPPEPDEPSAPLKEHINVIFIGHVDAGKSTIGGQIM
YLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNLEEREKGKTVEVGRAYFETERRHFT
ILDAPGHKSFVPNMIGGASQADIAILVISARRGEFETGFERGGQTREHAMLVKTAGVKHI
VVVINKMDDPTVEWSQARYEECKEKLIPFLKKVGFNPKKDLYFIPVSGYTGANLKEPDRE
ICPWYSGPPLIQYLDELQSIDRRTDGPIRVPITDRYKDMGTVALGKLESGTITRGMQLLL
MPNKTTVEILALQSDENEVESASPGENLKLRLKGIEEEDIIPGFVLCSPDNVCSTGRVFD
AQVVILEHKSIICAGYSCVMHCHACVEEVQFKVLLALVDRKTGKIDQTKGRPRFIKQDNI
VIARLEATGLICIETFKDFPQMGRFTLRDEGKTIAVGKVLKLRE
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggacccaacgaacggacagtaccaggagcccgattcttgggagcaagtagcggactca
ggaccggcaaacaccgaggcaccgctacaaattcagaagcctttttccagcttgaacatc
aatgccccggatttcgtaccatcttggttgacaaagacctctccgtcccaggaacagcag
ccagacgcagcgtccccagcagcagggtcagcagacaatgccatggacgtggagactgct
gcgggaggagatacacaagagcctatggacgacccagagccaccccctgcagagcccaag
cctgggactgtagacgacatggcagcggccaatggggagttagaagaagaggatgaggga
gagctcatggaagaggaggaggaggaggaagaggaggaggaggctgccaaggcgacagca
gctgtcaagaagaagcctccagagccagatgaaccctctgcgcctctcaaggagcacatc
aatgtcatcttcatcggccatgttgatgccggaaagtctaccattggaggccagatcatg
tacctgactggtatggtggacaaaaggacactggagaaatatgagagagaagcgaaggag
aagaacagagagacttggtacctgtcatgggcattggacaccaacctggaggagagggag
aaaggcaagacagtggaagtagggagagcgtactttgagacagagagaaggcacttcacc
attctcgacgctcctggtcacaagagctttgtgcccaacatgatcggtggagcctcgcaa
gctgacatagctattctggtgatttctgctcggagaggagagtttgagacaggatttgag
agaggaggtcagacgagagagcatgccatgctggtgaagacagcaggagtcaagcacata
gttgtagttatcaacaaaatggacgatcccacggtcgaatggagtcaagcaaggtatgaa
gaatgcaaggagaaacttatcccattcctgaagaaagttggcttcaaccccaagaaggat
ctctactttattcccgtatcgggatataccggtgccaacctcaaagaaccagacagagag
atctgtccctggtacagtggcccacccctaatccagtacctagatgaattgcaaagtatc
gacagaaggacggacgggcccatccgagtgcctatcacagacagatacaaggacatgggc
acagtggcactgggcaagctggagtcaggaacaatcaccagaggcatgcagctgttgctc
atgccaaacaagacaactgtagaaatcctggccctacagtcagatgagaatgaagtggaa
agtgccagtcctggagagaacctgaagctgagactcaagggtatagaggaagaggacatt
atcccaggcttcgtgttgtgttcaccagacaatgtgtgcagcacagggagggtgttcgat
gctcaggtggtgatcctggagcacaagtccatcatctgtgccggctacagctgcgtgatg
cactgccacgcctgcgtggaggaggtgcagttcaaggtattgctagcattggtggatagg
aagacaggcaaaatcgaccagacgaaggggaggccacgtttcatcaagcaggacaacatc
gtgattgctcggttggaggccacaggactcatctgcatcgaaaccttcaaggacttccct
caaatgggccgcttcactctacgagatgaaggtaaaaccattgccgttggcaaggtgctg
aagctgcgagaataa
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