Branchiostoma floridae (Florida lancelet): 118428877
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Entry
118428877 CDS
T01074
Name
(RefSeq) intraflagellar transport protein 140 homolog isoform X1
KO
K19672
intraflagellar transport protein 140
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
bfo03037
]
118428877
Cilium and associated proteins [BR:
bfo03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
118428877
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
PEP5_VPS11_N
WD40
ANAPC4_WD40
Beta-prop_WDR75_1st
WDR55
TPR_IFT80_172
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
TPR_COPA_B
Beta-prop_WDR35_TULP_N
PPR
PPR_2
TPR_GEMI5
WDR90_beta-prop_4th
Beta-prop_IFT122_2nd
EIF3I
WDR54
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
RPN7
Motif
Other DBs
NCBI-GeneID:
118428877
NCBI-ProteinID:
XP_035695014
UniProt:
A0A9J7N8W4
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Position
13:3630285..3669486
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AA seq
1478 aa
AA seq
DB search
MALYFDSKIQSPDGMGPCSNLAWHRTHTVLAVAATTSVGGGAVNLFMDDGEPVPDGCIQR
SSQVTCMSWHPNYRVLAMGWENGDVLMWNDQDKELHEAKSIHDAGVAILEWSTNGTRLLS
GDKNGLITVWKMDGKGRAQATPFCKHQMEQSVSVCLVRPGAAVDPENDISGLARAAVSGD
EKALDMFSWKKSLGSKITLGPSEGLAFFLGGIDGDVYYLDDKGKSSKVFTADGPIEKLLY
YEEKNILVTVTSGLVLTQHSVSSEGAFQEVTKVKLSGKMGQLNIIWAGRGLMATATGEPL
IRMWDLEKDDNYALPLPIDSTVSFTSGESVNCLSFCSKKGVLAGGTTEGKVVMWKYAPAP
GLAGKKQDGDAKWKFLTPTVLDGNITQIQWGSSLNLLAANIVATVIILSEQSMSAHFRDG
VTAVQVSSTQLSIDSFTTKAHYDLKTEIQVKGVYVTQDHLAVWNGKKLVVYDIPSDKSGV
IRMTGTFQTDSALVCMHEQNVYTVEPGKIQVRNFQGTVKQLLTFSETEGEPIAMDVCGQY
LVAGTSTNFLRMWDLSRREAKQHCNPKNLGEVIPELGAIVSVKSNCNGSKVAVLIKKTQG
QLDSRLWIYDVELDSVQYFDLATGMGELDELTSAQEATGEEVSEEQRGRSEAAKDVAGRF
PRVQYWDPQEPKLLTCEAILPPPSDDKKGSKTSSLSVVDVQPDVMVVSLFSTPEHGILLQ
DAYATDPAHDTLIGLKVPHFYFTKKAGESAKTDAQSSTTSLVPENVAQRTMRDFIGLEES
DKNSRDAMMNFSYFLTIGNLDEAFKAIKLIKSESVWENMAKMCVKSRRLDVARVCLGNMG
HARGARALREADKEPELDAKVAVLAIQLGLNEDAERLLKHCQRYDLLNELYQSTNQWNKA
LETAEAHDRIHLRTTYYHYAKHLEAQNDLLGAVPNYEKSDTHRFEVPRMLFDDPQSLEAY
IMKTKDKALRKWWAQYMESTGEMEAGLQFYEAAGDYLSLVRVYCYCGNMDKAAEIANETG
DRAACYHLARQYETQDRIKDAIHFFTRAGAYGSAIKLCKEHGFEDQLMNLALLSTPQDML
EAARYYEKRPGMEDKAVMLYHKGGHFSKALELAFRTQQFAALQLIAEDLDEKTDPVLLNK
CADFFMEHGQFDKAVELLVVARKYVDALELCMQHNVTITEPLAEKMTIPKDSTEFDGEYR
TQLLERLADCCMKQGSYHLATKKYTQAGNKIKAMRALLKSGDTEKIIFFAGVSRQKEIYV
MAANYLQSLDWRKDPEIMKSIIGFYTKGRALDSLAGFYDACAQVEIDEYQNYEKALGALS
EAYKCMTKARMKNASEQEEKVANIKHRVALIKKFLQARKVYEDDPEETMKQCQVLLEESD
LDSAVRIGDVYGLMIEHYARQENYPRAYQLMEEMRQRIPTVNMAYYVNMRTIEAVHRALD
IPLGRGMGAEKNMRTESLDEDEGEEVEEDVAEDYDDQV
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtactttgacagtaagatccagagcccagatggcatgggaccatgttctaac
ctagcctggcacagaacacacactgtactggctgtggctgctactacaagtgtgggggga
ggtgctgtcaacctcttcatggacgatggagagccagttccggacggttgtatccagcga
tcatcacaagtcacatgcatgagctggcacccgaactaccgcgtactggccatgggctgg
gagaatggggacgtcctgatgtggaacgatcaggacaaggagctgcacgaggccaagtcc
attcacgacgcgggggtggccatcctggagtggagcaccaacgggactcgtctactgtct
ggggacaagaatggactgatcaccgtgtggaagatggatggtaaaggcagagcccaggcc
acccccttctgtaaacaccagatggaacagtccgtctcggtgtgccttgtgagaccaggg
gcagccgtggacccagaaaatgacatcagcggcctagcgcgggctgccgttagtggcgac
gagaaggccctggatatgttctcctggaagaaatccctcggctccaaaatcaccctcggt
ccttccgagggtctagccttcttcctcggaggaatagatggagatgtctactaccttgat
gacaagggcaagagttcgaaggtcttcacagcggatggaccaatagagaagctgctttac
tatgaagagaagaacattctcgtgaccgtgacctctggtctcgttctgacccagcacagc
gtatcgtccgagggcgcctttcaggaagtaaccaaggtgaaactgagtgggaagatggga
cagttgaacatcatctgggcaggacgaggcctgatggccacagctacaggggagccactc
atcagaatgtgggatttggagaaggatgacaactatgccctgcccctgcctatagacagc
actgtctcttttacatctggggagtcggtcaactgtctgtcattctgttccaaaaaaggt
gtcctcgctggtgggaccactgagggtaaggtggtgatgtggaagtacgctccggcaccg
gggctcgcgggaaagaagcaggacggagacgccaagtggaaatttctaacaccgactgtg
ttagatggaaacataacccaaatacagtggggctcatctttaaacttgctcgctgcgaat
attgtggcgaccgttatcattctgagcgagcagtctatgagcgcccacttccgagatggc
gtgacagcagtgcaggtgtcatcgacccagctctctatcgacagtttcaccaccaaggct
cactacgacctgaagacagagattcaagtcaaaggagtgtatgtcacgcaggatcactta
gcggtgtggaacggaaagaagctcgtagtttacgacatcccgtccgacaagagcggagtg
atacgaatgacgggcacgttccagacggactcggcgctggtgtgcatgcacgagcagaac
gtgtacacggtagaacccgggaagatccaggtgcgaaacttccagggcacggtcaagcag
ctcctgacgttctcggagacggagggggaacccatcgccatggacgtgtgcggtcagtac
ctggtcgcgggaacgagcaccaacttcctcaggatgtgggacctctcaagaagggaagca
aagcaacactgcaacccaaagaacctaggagaggttataccagaactgggtgcgattgtc
tcagtcaagagcaattgcaatggcagcaaagtagctgtcctcataaaaaagacacaggga
cagctggactccagactatggatctatgatgtggaactggacagtgtccagtattttgac
ctggccacaggaatgggagagttagacgagctgacctcggcacaggaggccacgggggag
gaagtgtccgaagagcagaggggtagatcagaggcagctaaagatgtggcgggcaggttc
cccagggttcagtactgggacccacaggaacccaagcttctgacatgcgaggccattcta
cctcctccttctgatgacaagaaaggttccaagacgtcttcactcagtgttgttgacgtt
cagccggatgttatggtggtgtcgttgttcagtacgccagaacacggtatactcctgcag
gacgcgtatgccacagacccggcacacgacactctcatcggactgaaagtccctcacttc
tacttcaccaagaaggctggagagtctgcaaaaacagacgcccagtccagtacgacgtcc
ttggtgcccgaaaatgtggctcagcgtacgatgcgtgacttcatcggactagaggagagc
gataagaactcgcgggatgccatgatgaacttcagttacttcttgacgatagggaacttg
gacgaagccttcaaggcaataaaactcatcaaaagtgagtcagtgtgggagaacatggcg
aagatgtgcgtgaaatcccgccgactggacgtagcacgggtttgtctaggaaacatgggg
catgcccgcggggcgcgggcgctgagagaggcagacaaggaaccggaactggacgccaag
gtggccgtgctagctatacagctaggactgaacgaggatgcagaaagactgctgaaacac
tgccagaggtatgacctgctgaatgagctgtaccagtccaccaaccagtggaacaaggca
ctggagacggcagaggctcacgataggatccacctcagaaccacctactatcactacgcc
aagcacctggaggcacagaacgacctgctaggggcagtacccaattatgagaagtcagac
acccacagatttgaggtgcctcgaatgcttttcgacgacccccagtcgcttgaagcctac
atcatgaaaaccaaagacaaagcattacgtaagtggtgggcccaatatatggagagtaca
ggggaaatggaggcagggctacagttctacgaggcagccggagactacctgtcattggtc
agagtctactgttactgtggcaacatggacaaggcagctgagatagccaatgagacggga
gacagggcggcgtgctaccatctggcccggcagtacgaaacccaggaccgtatcaaggac
gctatccatttcttcacccgggcaggagcgtacggcagcgccatcaagctgtgcaaggaa
catggatttgaagatcaactgatgaacttggcattactgagtacccctcaagacatgttg
gaggcagctagatactatgagaaaaggcccgggatggaggacaaggctgttatgttgtac
cacaagggaggtcacttctccaaggccctggagttagccttcagaacgcagcagtttgct
gccctacagctgatcgcagaggacttggacgaaaaaacggaccctgtcctgctcaacaag
tgcgccgacttcttcatggagcacgggcagttcgacaaggccgtggagctgttggtggtc
gccagaaagtatgttgatgccctggagctgtgcatgcagcacaacgtgacgatcacggag
cccctggccgagaagatgaccatcccgaaggactcgacggagttcgacggggagtaccgt
acgcagcttctggagaggctggcagactgctgcatgaagcaaggctcgtatcatctggct
actaagaaatacacacaggctgggaacaagatcaaggccatgcgggctctcctaaagtcc
ggcgacacggagaagatcattttcttcgcgggcgtctccagacagaaggaaatctacgtc
atggccgccaactacctccagtcgctggactggcggaaagacccggagatcatgaagagc
atcatcgggttctacaccaagggccgggccctggactcgctggcagggttctatgatgca
tgtgcccaggttgaaatagacgagtaccagaattacgagaaggcgcttggcgccctgagc
gaggcgtacaagtgcatgacaaaagcgaggatgaagaatgcctcggagcaggaagagaag
gtggccaacatcaagcacagagtggccctcatcaagaaattcctgcaagccaggaaggtg
tatgaagatgaccccgaggaaaccatgaagcagtgccaggtactactggaggagtcagac
ttggactctgcggttaggatcggtgacgtctacggactcatgatcgaacactacgcacgt
caggagaactacccaagggcctaccagctgatggaagagatgagacagcgcatcccgacc
gtcaacatggcgtactacgtcaacatgcgtaccatcgaagccgtccaccgtgccttggac
atcccgctgggccgcgggatgggcgccgagaaaaacatgcggacagaaagtctggatgag
gatgaaggggaagaagtggaagaggatgtagctgaggactatgatgatcaagtctaa
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integrated database retrieval system
