KEGG   Branchiostoma floridae (Florida lancelet): 118429074
Entry
118429074         CDS       T01074                                 
Name
(RefSeq) splicing factor U2AF 50 kDa subunit-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
bfo  Branchiostoma floridae (Florida lancelet)
Pathway
bfo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bfo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118429074
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bfo03041]
    118429074
Spliceosome [BR:bfo03041]
 Complex A
  U2 snRNP components
   U2 related factors
    118429074
 Complex B
    118429074
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7
Other DBs
NCBI-GeneID: 118429074
NCBI-ProteinID: XP_035695325
UniProt: A0A9J7M6W8
LinkDB
Position
13:complement(15030493..15043042)
AA seq 559 aa
MRRALWVIPTFLEKTPSWYFLDVRGVLAATTMAAVDSQNYENQISESKSEHRERDRDRDR
DRGRKRRSRSRSRSGSPRGGRGGGDRRRRGGRSRSRSGSRDRGRRRRVIGGLDDDKAPIL
PAGRSPRRSRRRKPYQYWDVPPPGFENITPMQYKAMQAAGQVPLLASAGGAASMPSMLAA
SASEMTRVGNIASDMPGLGNMASAATGSIPSAALLANAGTAMPIGSQMTRQARRLYVGNI
PFGVTEEAMIDFFNTQMHRASLAQAPGNPVLACQVNLDKNFAFLEFRSVDETTLAMAFDG
IIFQGQSLKLRRPHDYQPVPGMAENPDIHVPGELIGGFPVIPGVVSTVVQDSPHKIFIGG
LPNYLNDDQVKELLLSFGQLKAFNLVKDSSTALSKGYAFCEYVDPNVTDQAIAGLNGMQL
GDKKLIVQRASVGAKNAQNQPVQLQIPGLTLTGNAGPPTEVLCLMNMVMPEELMDEEEYE
DILEDVREECGKYGAVLSVEIPRPIEGVDVPGCGKIYVEFRSIMDCQKAQQALTGRKFAQ
RIVVTSYYDPDKYHRRDFQ
NT seq 1680 nt   +upstreamnt  +downstreamnt
atgagaagggccttgtgggtaattcccacttttttggagaagacgccatcttggtatttt
ctggacgtgcggggcgtgctagcagctacaacaatggcagcggtagatagccaaaattac
gagaatcaaatatccgaatccaaatcagaacacagagaacgggacagggaccgcgaccga
gacaggggccgtaagcgtcgttcacggagtaggagcagatcgggctcgccccgtggtggt
cgtggtggaggcgatcgcaggagacgtggaggcagaagtagatcccgtagtggcagcagg
gacagggggcggcggagaagggtgatcggtggcttggatgatgacaaagctccaatcctt
cctgcaggtcgctccccccggcgatccaggcgccgtaagccgtaccagtactgggacgtc
cccccgccaggcttcgagaacatcactcctatgcagtacaaagccatgcaagccgctggc
caggtcccattgctcgccagtgctggaggtgcggcgtcaatgccatccatgctggcagct
agtgcttcagaaatgacgagggtaggcaacatagcatcagatatgccggggttgggcaac
atggcatcagcagctaccggctccatcccgagcgcagcgttgttggctaacgcaggcacc
gccatgccgattggcagccagatgaccaggcaagcccgccggctgtacgtgggcaacatt
cctttcggtgtcaccgaggaggctatgatagacttcttcaacacccagatgcaccgtgcc
agcctggctcaggcccctggtaaccctgtcctcgcctgtcaggtcaacctggacaagaac
ttcgctttcctggagttccgatcagtggacgaaacgaccttggccatggcatttgatggc
atcatcttccaaggtcagtccctgaagctccgccgtccccatgactaccaacctgtgccc
ggcatggctgagaacccggacatccacgtgccaggtgagttgataggtgggttccccgtt
attccaggcgtggtgtcgacagtggtgcaggactccccgcataagatcttcatcggtgga
cttcccaactacctaaacgacgaccaggtcaaggaacttctcctgtcgttcggccaactc
aaagccttcaacctggttaaggacagctccactgcactgtcgaaggggtacgccttctgt
gaatatgtcgatcccaacgtcacagaccaggctatagcaggactgaatggaatgcagctt
ggagacaagaagctgattgtccagagggccagcgttggagccaagaatgcacagaatcaa
cccgtccagctccagatcccgggcctgactctgaccggcaacgcaggaccccccacggag
gtgctgtgtctcatgaacatggtcatgccagaagaactcatggatgaggaggaatatgaa
gatattcttgaggacgtgcgagaggaatgcgggaaatacggtgcagtgttgagtgtggag
atccccaggcccatcgagggagtggacgtccctggctgtggcaagatctacgtggaattc
aggtccatcatggactgtcagaaggcgcagcaggcgctgaccggccgcaagttcgcccag
cgtatcgtcgtcacgtcgtactacgaccccgacaagtatcacagacgagatttccagtag

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