Branchiostoma floridae (Florida lancelet): 118429255
Help
Entry
118429255 CDS
T01074
Name
(RefSeq) RAD50-interacting protein 1-like isoform X1
KO
K20474
RAD50-interacting protein 1
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118429255
Membrane trafficking [BR:
bfo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
118429255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
Vps53_N
Rab5-bind
Vps54_N
Cytochrom_B559a
Tweety
MG280
DncV_C
Cor1
Motif
Other DBs
NCBI-GeneID:
118429255
NCBI-ProteinID:
XP_035695621
UniProt:
A0A9J7M697
LinkDB
All DBs
Position
13:complement(99838..144786)
Genome browser
AA seq
762 aa
AA seq
DB search
MADNSHLENRRFVQEFINSEFVHMKSLNNVESILRRVEEDKKGLEDQLSTVSSEVPKKIE
GAVQDASNSVRHIQDISEEQTKISQDITSHLTQTQPTKENLAQFTTQVEGVERYVHYLRW
LTFFEEMSNDIQQSVLVNSLGGAVNFFAEMFDICEVLQKSRCVNLVQFSNSTILFWHRIL
KDKLSSEFEEVVKQLGWPFLGVSTHVPLQVPRPTHLELTFRLETLFEQLLKIQLPDTMTG
RMRRSSQTSMVSDDEERPLLLPLQLLLKPLRKRFKFHFTGSKQTNALDKPEWYLTQILGW
IRDHADFLDHNIQPLLNRAGHPHVEAKVEFTRGLLTLVADKLAQDMDSLLYDEYLFSHTI
DEVLLFDRELRGSYNYPASQPGVLHVLTVQDTFHRWITVERKFAVEKMDLLFSSETAWTC
QYGDIEDVDDMKTGECAEGFMTLMLALTDRYKPLPSAANKLQFLDLQLELIDDFRIRLTQ
VMKSEAQDPLGYTFLSILNAVNYVISVLREWSETVFFLQLQYYRAEQYYTSRDQSLPQEP
DLSSLQGAVFDELITLFQLLRTDMLSVVCNLVFTEMKARSKDYKDEKWLGLPSDKEYISR
MVSASACPLLLLLKDRLHQLQLQLATSLFSRVWQTLADIINTFIMEEVILNNHFNDGGAA
QLQFDMTRNLFPLFGEYTPRPDNYFKDVKEACLLLNLKPGSAILLKEMLNKTLHGSKVDP
NTEKESPEKVLMDMGVFKLSAQEAERVLNLRANWPAGRQGRS
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaatagtcatctggaaaatcgtcgtttcgttcaggaatttataaactcagaa
ttcgtgcatatgaaatcgcttaacaacgttgaaagtatattaagaagagttgaggaggac
aagaagggtttggaagatcagctttcaacagtatcaagtgaagtaccaaagaagattgaa
ggtgctgtgcaggatgccagcaactctgtacgtcacattcaggacatctctgaagaacag
actaagattagtcaggacataacaagtcacttgactcaaacacaaccaacaaaagaaaac
cttgctcagtttacaactcaggtggaaggtgttgaaagatatgtccactatctcagatgg
ctgacttttttcgaagaaatgagtaatgatattcagcagtcggtgttggtgaactccctc
ggtggtgccgtcaacttttttgcggaaatgtttgatatctgtgaggttctgcagaagtcc
aggtgtgtgaacctggtccagttctccaactcaacaatcctcttctggcacagaattctc
aaggataaattgtcaagtgagtttgaggaggttgtgaaacagctgggctggccgttcctg
ggtgtgtctacccacgtgcccctgcaggtgccccgcccgactcacctggagctgaccttc
agattggagactctgtttgaacagctgctgaagatccaacttcctgacacgatgacaggc
aggatgagaaggtcatctcagacgtccatggttagtgatgatgaggagcgacctcttctg
ctgcccctgcagctgctgctgaaaccactccgaaaacgcttcaaatttcacttcactggg
agtaaacagactaatgctctagacaagccagagtggtaccttacccagatcctgggctgg
atcagagatcacgctgacttcctggatcacaacatccaacctctcctcaacagagctggg
caccctcatgtggaggcaaaggtggagtttacccgaggcctgctgacactggtggcagac
aagctggcacaagacatggactccctgctgtatgatgaatacctcttctctcatactata
gatgaggttctgctgtttgatcgtgaactgcgggggtcctacaactacccagccagccag
ccaggggtcctacatgtcctgactgtacaggacaccttccacaggtggattactgtggag
aggaaatttgctgtagagaagatggaccttctgttctcgtcggagacagcctggacatgt
cagtatggagacattgaggatgtagatgacatgaagacaggagaatgtgcagaaggcttc
atgaccctcatgctggcactcacagatcgatacaagccccttccttctgctgccaacaag
ctgcagtttctggacctgcagctggagctgattgatgacttcaggatccgcctcacccag
gtcatgaagtccgaggcccaagaccccctaggttacaccttcctctccatcttgaatgct
gtcaactatgtcatcagtgtgctgcgagagtggtcagagacagtgttcttcctacagctg
cagtactaccgtgcagagcagtactataccagcagggaccagagcctgccccaggagccg
gacctcagcagcttgcagggagctgtgtttgatgaactcatcaccctgttccagctgctg
aggactgacatgctgtctgtggtgtgtaacctggtctttactgagatgaaggcaaggagt
aaagactacaaggatgaaaaatggctgggcttgccctccgacaaggagtacatctcccgg
atggtgtcagcatcagcctgcccactcctcctgctgctgaaggacagactgcaccagctg
cagctccagctggccacttcgctcttcagcagggtgtggcagactctagcggatatcatc
aacactttcatcatggaggaggtcatcctcaacaaccacttcaatgatggtggagcagcg
cagcttcagtttgacatgaccagaaatctcttccctttgtttggtgaatacacacccagg
cctgacaactacttcaaagatgtgaaggaagcatgtttactgctgaacttgaagcctggc
tcagctatcctgttgaaagagatgctgaataagaccttacatggatctaaggtagaccca
aacactgaaaaggaatcaccagaaaaggtgctgatggatatgggtgtgttcaagttgtct
gctcaggaggctgagagggtgctgaacttacgggcaaactggccagcagggaggcagggc
aggtcataa
DBGET
integrated database retrieval system
