Branchiostoma floridae (Florida lancelet): 118429265
Help
Entry
118429265 CDS
T01074
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfo04121
]
118429265
Enzymes [BR:
bfo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118429265
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
U-box type E3
118429265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
zf-C3HC4_2
zf-CCHC
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-C3HC4
zf-C3HC4_4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
118429265
NCBI-ProteinID:
XP_035695632
UniProt:
A0A9J7M6D6
LinkDB
All DBs
Position
13:complement(15566311..15586384)
Genome browser
AA seq
1401 aa
AA seq
DB search
MSCVHYKFHSQLDYSKVTFDGLNISLGDLKKAILLQKKIGKSPDFDLQVTNAQTKEEYKD
EVSLIPKNSSVIVRRIPLGGAVKTKIQPTSTNVVAGSSMKPMDFQPGPSKSSMGKMTDLV
SADATEDEKIKAMMSQSTKDYDPSTYVRRPGRPYQNHQGPPPSTYVCFRCQKPGHFIRDC
PVPPTEGNYLGPRVKRSTGIPRSFMTTVSGPGAKGALLTATGEYAVPTIDEQAYKEGKKE
RPPFLPSQEQEVVPEEDNSIPQELLCMLCKDLLSDAVVIPCCGNSFCDECIRNSLLESEE
HVCPSCNETGVSPDSLIANKFLRQAVTNFKNETGYTKAKLKKQEAVPDPTPSRPPDKPQV
QLPPPASTAPSSSGATGVPIATITKTPNVVGQNLHFLNDHPPGPRPSGPRPMGPRSAGPR
PPFGRGRFQGPRHSNFNPRFRGPRPHRDFQPRATEPRPDLPPRMPPPPPVIPPGPGNSPP
FVPVSSAAPPHPPPFFPPPPGPGMVPGPPQPPTFPPGQPPPPGLTPPQGFPGQPPPAPNR
DGATSKLDKMTNDFANELEAYKLLRQKQRHRSGSPSRSYSRSPSHSSWSSSSSSGSSKSR
SRSRSRSRSRSKSRSRTRPRSRSRSRSRSFSRSPRRSRRSPRFRRSFSRSPPPRSRSRSP
PRRGRRRSAGARYSRSPSPRSRSRHYPPAPPGYPPDLYYYDPYYYERAGFPGYPPGRPRS
PSFDYYRGRSPPRGRSPPPFYRSRSPHAPPYPYSYPYPYPPDFPPPPHAHTSSPSRRPPD
SSRHHPRSSRPDRDRGSPSKEGDARRKDRDRRDRGSADKSRKEKPSAEQDAKKDKSTDKT
DKDASVSKKEKSPTVTESNEGKTEVEGEPKEKANSQVKEAEETKDVKKSHSRERRSRRSG
REGRDRDTSATTSQDSENKDKVEPGANVEAKEGSVSSSSRHRHHHKHKRRHSRRNPEVPV
ETESAAKVESTAQKQDVEHEAEVRKAEVAVGEKVAPPKEKEIALSKEKEVALRKEKEVAP
VSSTEPAPEEPTVKKAKEEVGDAKPSKESRSHRQHKHASSKTSHDKHASKRKRKESKPDS
SRVELEANGGVQSDMSSEVAAKDDKKKEKKQEEKARIKVDPPEPVPTKKVKVERSDDEKW
KERKVKLERSDDERWKEKARSVVKLKEDMPSSSEAPPAKEKVKKEKTTKRKVTVMSDTIA
SSSSLVGYSSASSTGGSPAKKKARAEAMGLSRTVQLKTTSASPTVVKKDVQVAPASSTSA
EEMITITLPLSKWERDDFDSEGTNTPSRLSPVKDYTHEEAEFEPDYSVSSSESESEEGDT
ATDAGSQAPDQATSASPSPPGSPKHKKKHKKNKKKHKKEKKAESSTKKHKHKKKKTKHKH
KDKDKSKNKDSSSKVKSIVKA
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgtgtccactacaagtttcacagtcagctggactacagcaaagtgacgtttgac
ggcttgaacatctcccttggggacctgaagaaggccatcctgctccagaagaagattggg
aagagtcctgactttgacctgcaggtcaccaacgcacagaccaaagaagaatacaaggat
gaggtcagcctgatcccgaagaattcatccgtgattgtccgcaggattccactcggaggt
gccgtcaaaacgaaaatccaaccaacgagtaccaatgttgtagcaggttccagcatgaag
ccaatggacttccaacctggaccaagcaaatcatccatgggcaagatgacagatctggtc
agtgctgatgccacggaggatgagaaaatcaaggccatgatgtcacagtctaccaaagac
tatgatccttcaacgtatgtgaggagaccaggaaggccttaccagaaccaccagggaccc
ccaccatccacctacgtgtgcttccgctgccagaaacccggccacttcatccgggactgc
cctgtgcctcctacggagggaaactacttgggcccacgagtgaagcggagcactggcatc
ccacggagcttcatgacgactgtgtcgggtcccggggccaagggagccctcctcacagcc
acaggagaatacgcagtacccactatagatgagcaagcctacaaggaggggaagaaggag
cgtccccccttcctgccgtcccaggagcaggaggtggttccagaggaggacaacagcatc
ccacaggagctgctgtgtatgctgtgtaaagacctgctgtctgatgccgtggtcataccc
tgctgcggcaacagcttctgtgatgagtgtattcgtaactcactattggagtcagaggaa
cacgtctgcccatcctgcaatgagacgggcgtctccccagactcacttatcgccaacaaa
ttccttagacaggctgtgaccaactttaagaatgaaactggctacacaaaggcaaagttg
aagaaacaagaggctgtgcctgacccaactccatctagacctccagataaaccacaggtg
cagctgcctcccccagcatctactgctccctcctcttcaggtgcaacaggtgttcccata
gcaaccatcaccaagacacccaatgttgtggggcagaatctgcattttctgaatgaccac
cctcctggtccacgaccttcaggcccgcgacctatgggtcctcgatcagctggtcctcga
cccccgtttggacgtggaaggttccaaggcccaaggcattccaactttaatcctcgcttc
cgtgggccaaggccgcatcgagacttccagccccgagccacggaacctagaccagacctt
cccccgagaatgccacccccacctccggttattcctcccgggccaggcaacagcccacca
tttgtacctgtatcatcagctgcacctccccaccccccaccgttcttcccccctcccccg
ggaccaggcatggtccccggtcccccccagccgccaaccttcccccctggtcagcctccc
cctcctgggctcaccccaccccaggggtttcctggacagccacctcctgcacccaacaga
gatggagcaacatccaaattagacaagatgaccaacgactttgccaacgagctggaggcg
tacaagttgctccgccagaagcagcggcaccgctcgggctccccgtcccggtcctacagt
cgctctccatctcactcctcctggtcatcttcctccagctcaggatcatccaagtctaga
tctaggtccagatcaagatccagatctagatcaaagtcacggtccaggacgagaccccgt
tcgcggtctcgatcaaggtcacggtccttctctcggtcgccaagacgttccagaagatcg
cccagattcagacgatccttctcgcgatcccctccaccacggtcgcgatcacgttcccca
ccgcgtcgtggacggaggcggtccgccggggctcgttactcgcgctccccctcaccaagg
tcgcgcagtaggcactacccccctgctccaccgggctatccaccagatctctactactac
gatccctactattacgagcgtgcaggattccctggctatcctcctggtcgtcccagatca
ccctcttttgattactaccggggacgttcccctcctcgaggaagatcaccccctcctttc
tacaggtcccgttcgccccatgcgcctccctatccttactcatacccttacccttaccct
cctgatttccccccacccccacatgcacatacatcctccccgtcaagaaggcctccggac
tccagcaggcaccatccccgctcgtccagacctgacagagaccgggggagtccttccaag
gagggtgatgctcgtagaaaagacagggacaggagggatagaggttctgcagacaagagc
aggaaggagaaaccttcagcagaacaggatgccaagaaggataaatctacagataaaaca
gacaaagatgctagtgttagcaagaaggagaagtcccccactgttactgagagcaatgag
ggtaaaactgaagtggaaggggagccaaaggagaaagcaaactctcaggttaaggaagct
gaagaaacaaaggatgtgaagaagtcacattctcgggaaagacgcagtagaagaagtggt
agggaaggcagagacagggacacaagtgcgacaacaagtcaagacagtgaaaacaaggat
aaggttgaacctggtgctaatgtggaagccaaggagggcagtgtcagtagtagtagtaga
catagacatcatcacaaacacaagcgcagacatagtagacggaacccagaagtccccgtt
gaaaccgaaagtgctgctaaagttgaatcaactgctcagaaacaagatgtagaacatgaa
gcagaggtcaggaaagctgaagttgctgtcggagaaaaagttgctccgccaaaggaaaag
gaaattgccctgtcaaaggaaaaggaagttgccctgcggaaggaaaaggaagttgctcca
gtatcctccactgaacctgctccagaggaacctactgtgaagaaagccaaggaggaagta
ggggatgcaaaaccctcaaaggaaagccgctcccacagacagcacaaacacgcctccagt
aaaacgtctcacgacaaacatgctagtaagagaaagagaaaagaaagcaaaccagacagc
agcagggtcgaactagaagccaacggtggtgttcaatcagatatgtcctcagaagttgct
gcaaaggatgacaaaaagaaggagaaaaaacaggaagagaaggctaggattaaagtcgat
cctccagaacctgtccccacaaaaaaggtcaaggttgaaaggtcagatgatgaaaagtgg
aaggagagaaaggtcaagctagaaaggtctgacgacgaaaggtggaaggagaaggctcgc
agtgtggtgaagctgaaagaggacatgcctagcagctccgaggcgcctcctgccaaagag
aaggttaagaaagagaagacgaccaagaggaaggtgacggtgatgtcagacacgatcgcc
tcctcctcgtctctggtgggctactccagtgccagttccacaggagggtcacctgccaag
aaaaaggccagagcagaggccatgggacttagcaggactgtgcagttgaagaccaccagt
gccagccctaccgtagtgaagaaagatgtccaagttgctcctgcctccagcacttcagca
gaagagatgataaccatcaccttacctctgtccaagtgggagcgggacgacttcgattcc
gagggcacaaacacaccttcacggctgtccccagtcaaggactacacgcatgaggaggca
gagttcgagccagactacagcgtctcaagttctgaatctgagagtgaggagggagacacc
gccacagacgcaggctctcaggcacctgaccaggctacctcggccagccccagtccgcca
gggagccccaagcacaaaaagaagcacaagaaaaacaagaagaaacacaagaaggagaaa
aaggcagagagtagtactaagaagcacaaacacaagaaaaagaaaaccaaacataagcac
aaagacaaggacaaatcaaagaataaagatagttcctcgaaggtcaagtccattgtgaaa
gcgtag
DBGET
integrated database retrieval system
