Branchiostoma floridae (Florida lancelet): 118429274
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Entry
118429274 CDS
T01074
Name
(RefSeq) 3'-5' exoribonuclease 1-like
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118429274
03036 Chromosome and associated proteins [BR:
bfo03036
]
118429274
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
118429274
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
118429274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
118429274
NCBI-ProteinID:
XP_035695647
UniProt:
A0A9J7M6E7
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All DBs
Position
13:complement(13639038..13644726)
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AA seq
222 aa
AA seq
DB search
MAYGHSPKYYCVVDFEATCIKPRRADFRTEIIEFGAVIVDGSNFQMVDEFHEFCRPVENP
VLHQFCKELTGIQQDTVDSADPFPVVFDRFQKWLSNRGLTDSNFAMVTDGIFDCNQIMRS
QCEVSRMSFPSFARRFSNIKLHYMQIMGIRLRRGQPTPRIPDMLRALGISQEGQLHSAIS
DARNICRIMEALSRRLRANGRPAVFPNNETLKANWVVNHPSD
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacggacactctcccaagtactactgcgtggtggattttgaggcgacatgtatc
aagccgcgtcgtgcagacttccgcaccgaaatcatcgagtttggcgccgtcatcgtggat
ggaagtaacttccaaatggttgacgagttccatgagttctgcaggccagtggagaaccct
gttctgcaccagttctgtaaggaactcaccgggatacagcaggacacagtggattctgct
gatcctttcccggtggtgtttgaccgcttccagaaatggctgtcaaacagaggccttaca
gactccaacttcgcaatggtgacagatggcatcttcgactgtaaccagatcatgcggtcc
cagtgcgaggtgtcccggatgtcgttcccaagctttgcccggagattctccaacatcaag
cttcactacatgcagatcatggggatccgtctgcggcgcggccagccgaccccccggatc
ccggacatgctgagggcactcggcatcagtcaggagggacagctccacagcgccatcagc
gatgcgcgcaacatctgccgcatcatggaggccctgtcgcgcagactccgcgccaatggg
cgacctgccgtgttccccaacaacgaaactctgaaggccaactgggtcgtgaatcatccc
tccgactag
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