Branchiostoma floridae (Florida lancelet): 118429923
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Entry
118429923 CDS
T01074
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 5-like isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bfo01002
]
118429923
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfo04121
]
118429923
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bfo04147
]
118429923
Enzymes [BR:
bfo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118429923
Peptidases and inhibitors [BR:
bfo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118429923
Ubiquitin system [BR:
bfo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118429923
Exosome [BR:
bfo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118429923
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
UBA
zf-UBP_var
zf-UBP
PNGaseA
Motif
Other DBs
NCBI-GeneID:
118429923
NCBI-ProteinID:
XP_035696452
UniProt:
A0A9J7N7U7
LinkDB
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Position
14:15227964..15251198
Genome browser
AA seq
853 aa
AA seq
DB search
MSALETLYGYLPCVKVPRGGEKIYKDECIYCYDTPESEGGLFVCLKSYMGLCHLHVQKFY
EKFPENPIYLHLKRTKLEISGAAGGGEAEDPPAKKPTRLAIGVEGGFDVSEEGRYEIQEE
IAIVVMPGYESFPYPSIEDTPVQIQLAIEGILKSSGADKQSAVEAWDGEVRQVSKHADKL
EQLNNGVKVPPKGWKCSRCDLVENLWMNLTDGSISCGRRYFDGSGGNNHAVDHFRETGFP
LAVKLGTITPTGADVYSYDEDDMVEDPHLARHLAHFGINMMSMEKTDKTMTELEIDINQR
VGEWATIQESDKQLKPMYGPGYTGMKNMGNSCYLNSVMQVIFTLPDFRKRYFEDYDLILN
RAPEEAPSDFTTQMAKVGYGLLSGTFSNPPEEEMAAAAAAPPAKKVQNGITPRMFKTLIG
KGHPEFSTNRQQDAQEFFLHLINIIDRHSRGTFNPTVSLKYMAEERIQCVQSGKVRYKQR
SDYLLSLPVPVELADNREELVVYETRKREKESKGEKMDPKELVRAKLSLQTCLDSWAEPE
SIQDFYSSALQARSVANKSTRFATFPNYLMVHLKKFTIGEDWVPKKLDVSMSIPDELDLE
HLRGKGIQQGEEELPEGEEPPMGEPAGAGAGATAATATGQKAEPEIDEETVIQLSEMGFP
TEACRKAVYYTSNCGAEAAMDWIMQHMDDPDFAQPLQIQRAPAGQRPEPEGAAAGGPRAP
ESSSGLSEEALTILEAMGFTRGQAIRGLKATDNNLERAADWLFSHSDELDTMPMDTAEQE
SLPVQATPQVQDGTGKYKLVAFISHMGTSTMCGHYVCHILKDGRLVIYNDEKVAVSENPP
KDLAYLYLYQRIQ
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgttagaaactctgtacggctatctcccctgcgtcaaagttccccggggtggg
gagaagatatacaaggatgaatgcatatactgctacgacacaccggagtcggagggtggt
ctgtttgtgtgcctgaagtcgtacatgggcctgtgtcacctgcatgtacagaaattctac
gagaagttcccagagaaccccatctacctgcacctgaagaggaccaaactagagatctct
ggtgcagcagggggtggggaagctgaggaccctccagccaagaaaccaacaaggctggcc
attggtgttgaaggaggttttgatgtgagtgaagaaggtcgctatgagatccaggaagag
atagccatcgtggtgatgcctggatacgagtccttcccatacccaagtatagaggacaca
cctgtgcagatccagttggcgatagaaggtatcctgaagtcctcaggtgctgacaagcag
tctgcagtggaggcctgggatggggaagtcagacaagttagcaaacatgcagataagcta
gagcagctgaataatggagtcaaggtgcctcccaaaggctggaagtgttctaggtgtgac
ctagtagaaaacctgtggatgaacttgacagatggaagcatctcctgtggacggaggtac
tttgatgggtcgggagggaacaaccatgccgtagaccacttcagagagacaggatttcct
ctggctgtcaagctggggaccatcacgcctaccggagcagatgtttactcctacgatgag
gatgacatggtggaagaccctcacctggccagacacctggcacactttggtatcaacatg
atgagcatggagaagaccgacaagacaatgacggagcttgaaatcgacattaaccagagg
gtgggggaatgggcgaccatccaggagtcggacaaacagttgaagcccatgtacggtcca
gggtacaccgggatgaagaacatgggaaacagctgttatctcaactccgtcatgcaggtc
atcttcacactaccagacttccggaaaagatattttgaagactatgatttaatcttaaac
agagcacccgaagaggcccccagtgactttactacccaaatggcaaaagttgggtatggt
ttgctatctggcaccttctccaacccacctgaagaggagatggctgcagctgcagctgca
ccacctgcgaaaaaagtccagaatggcatcactcccaggatgtttaagacattgataggg
aagggccaccccgagttctctacaaacagacaacaagacgcacaggagttcttccttcat
ctcatcaatatcattgacagacattcaagaggcacattcaacccaacggtatctttaaag
tacatggcagaagaacgtatccagtgtgtccagtcaggcaaggttaggtacaagcagcgc
tcagactaccttctgtccctacctgttcctgttgagctggcagataacagggaggagcta
gttgtgtacgaaacaaggaagcgagaaaaggaaagcaaaggggagaaaatggaccctaag
gagttggtgagagctaagctgtccctgcagacatgtttggatagctgggcagagcctgag
tctatccaggacttctacagcagtgctctacaggccagatctgtggccaacaagtcaaca
agatttgccaccttccccaactatttaatggtgcatctgaagaagttcacaataggtgaa
gattgggtgcccaagaagttagatgtgtccatgagcatccctgatgagctggacctggaa
cacttgagagggaaggggatacagcagggggaggaagagcttccagagggggaagagcca
ccaatgggagagcctgctggagctggtgctggggccactgctgctactgctactggacaa
aaagctgaaccagagattgatgaagaaacagtgatccagctgtcggagatggggttccct
acagaggcctgcaggaaggctgtgtactacacctccaactgtggggctgaggcagccatg
gactggatcatgcagcatatggatgatcctgactttgctcaaccactacaaatccagaga
gcgcctgcaggtcagcggccggagccagagggcgcagctgcaggggggcccagggctccc
gagtcgtcttcaggcctgagtgaagaggccttgaccattctggaggccatgggcttcaca
aggggacaggccatccgggggctgaaggctacagataacaatttggagagagcagcagac
tggttgttcagccactctgatgagctggacaccatgcccatggacacagcagaacaggaa
agtctccccgtacaagcaactccacaagtccaggatgggactggaaagtacaaacttgta
gccttcatcagccacatgggaacctctacaatgtgtggccactatgtctgccatatcctc
aaggatggaagattggttatctacaatgatgagaaagttgcagtctcagagaatccacca
aaagaccttgcctacctgtacctgtaccagaggatacagtga
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