Branchiostoma floridae (Florida lancelet): 118430554
Help
Entry
118430554 CDS
T01074
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03018
RNA degradation
bfo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118430554
09123 Folding, sorting and degradation
03018 RNA degradation
118430554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118430554
03041 Spliceosome [BR:
bfo03041
]
118430554
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118430554
mRNA degradation factors
5'-3' decay
Lsm complex
118430554
Spliceosome [BR:
bfo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
118430554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
118430554
NCBI-ProteinID:
XP_035697383
UniProt:
C3ZIA6
LinkDB
All DBs
Position
14:complement(3208909..3212292)
Genome browser
AA seq
126 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLEACDNWMNIKLRDVICTSRDGDRFWRMPECY
IRGSTIKYLRIPDEVIDMVKEDIVSKQRTKQQGSRGRGRGGPVHRGGFGSRGRGGPDKRG
GRGGPR
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atgctacctctgtcattgctgaaaactgctcagaaccaccctatgctggtggagctgaag
aacggagagacgtacaacggccatctggaggcctgcgacaactggatgaacatcaaactc
agggacgtcatctgcacatcacgggatggtgaccgtttctggcgcatgcctgagtgttac
atccgtggcagcaccatcaagtacttgcgtattcctgatgaggtcatcgacatggtgaag
gaggacatcgtcagcaaacagcgcaccaaacagcagggcagccgaggcaggggacgtggg
gggcctgtacacagaggaggttttggaagcagaggtcgtggtggtccagacaagagagga
ggaagaggcggacctagatag
DBGET
integrated database retrieval system
