Branchiostoma floridae (Florida lancelet): 118430625
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Entry
118430625 CDS
T01074
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bfo03009
]
118430625
Enzymes [BR:
bfo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
118430625
Ribosome biogenesis [BR:
bfo03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
118430625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
FtsJ
PCMT
Ubie_methyltran
Methyltransf_25
Motif
Other DBs
NCBI-GeneID:
118430625
NCBI-ProteinID:
XP_035697497
UniProt:
A0A9J7MA93
LinkDB
All DBs
Position
14:complement(8582039..8592192)
Genome browser
AA seq
721 aa
AA seq
DB search
MGRKRPDPSEAQKKGPGRKARKQKPPQMPRQLLQKDDGSQKILSSRQKQRLAKRTQKAVN
KAAAKGPQKKVPVTQGLSQGQKRSRTGSVSDSDDGGFSEEEEEESVEEEVEEDEDVEEEQ
GEGEEEEEEEEDDDDDDDMEDEDPASGFTDENKSWLRLAGKKEKLDLDGESSDDDLPADD
FLDDDDSDEGSEGDEDDDSDDSDDDDDAEEQEGDEALLPIEKASKKLKKRQQREEKLGEE
ELRTNIAEAETFVLPSGQEIEKESVQPPDLTMIHMRIKENMAVLNDFNKKRKDDRPRKEY
VQLLQKDLCLYYSYNDYLMEKIMQLFPLAEVIEFLEACEVDRPVTIRTNTLKTRRRDLAQ
ALINRGVNLDPVGKWSKVGLVVYDSAVPIGATPEYLAGHYILQGAASFLPVMALAPQEKE
KVLDMCSAPGGKTTYIAQLMKNTGMLFANDVNKDRVKAVVGNLHRLGVTNTVLCCHDGRH
FPKVIGGFDRVLLDAPCTGTGVISKDPSIKTNKDDADIKRHAHLQKELILAAIDSCDAKS
PSGGYIVYCTCSVMIEENEWVIDYALKKRNVKLVPTGLDFGKEGFTKFREFRLHQTMKLT
RRFYPHTHNMEGFFVAKLKKFSNAIPGQEPQAKEGEENTEASETPTEQSTETPASSSSPQ
KSPTQPTSPSAKSKKKRLFWKNKKSGKSPKAKTFKGQQKTSAGKRRKNKQNPGNKKKQKK
E
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggaagaggcctgatccttccgaggcgcagaagaaaggtcccgggcggaaggca
aggaagcagaaaccgccacagatgccacgacagcttctgcagaaggatgatggatcccaa
aagatactgtcgagccgacaaaagcaaagattggccaaaaggacgcagaaagctgtcaac
aaggcggctgcaaagggacctcagaagaaggtaccagtaacacagggactctcacaagga
cagaagaggtctcgtactgggtctgtcagtgacagtgatgatggaggcttcagtgaggag
gaggaggaagaaagtgttgaagaagaagtagaggaagatgaagacgtagaagaagaacaa
ggagaaggggaagaagaagaagaggaggaagaagatgatgatgatgatgatgacatggaa
gatgaagatcctgcctcaggcttcactgatgagaacaagtcatggcttcgtcttgcaggg
aagaaggagaaactggacttggatggtgaaagttcagatgatgacctgccagccgatgat
tttcttgatgatgatgactctgatgaaggatcagagggagatgaagatgatgactctgat
gatagtgatgatgatgatgatgcagaggagcaggagggagatgaagccttactgcctata
gaaaaggcctccaagaaactgaaaaagaggcaacagagagaagagaaactaggagaggag
gaacttcgcaccaacatcgcagaagccgaaactttcgttctgcccagtggccaagagatc
gagaaagaaagcgtgcagccgccagacctcaccatgatccacatgcgcatcaaggaaaac
atggcagtactgaatgacttcaacaagaaacggaaagatgacagaccccgtaaggagtat
gtgcagctgctacagaaggacctgtgtctgtactacagctacaacgactacctgatggag
aaaatcatgcagctgtttccactggcagaggtgatagagttcctggaggcgtgtgaggtg
gaccgtccggtcaccatcaggactaacacactgaagaccaggagaagagacctggcacag
gccctcatcaacaggggggtcaacctggaccctgtgggcaagtggtcaaaagtaggactg
gtggtgtatgactccgccgtacccatcggtgcgacccctgagtacctggccggccactac
atcctgcagggagctgccagcttcctgcctgtgatggcgctggcacctcaggagaaggag
aaagttctggacatgtgttctgcaccaggagggaagacaacatatatcgctcagttgatg
aagaacacagggatgctgtttgctaacgatgtgaacaaagacagagtgaaggctgtcgtg
gggaacctccaccgtctgggggtcaccaacactgtactctgctgccatgatgggagacat
ttccccaaggtgattggtgggtttgatcgtgtgctgttggacgcaccttgtacaggaaca
ggagtcatctctaaagacccttccatcaaaaccaacaaggacgatgcagacatcaagcgc
catgcccacctccagaaggaactcatcctggcagccatcgactcttgtgatgcaaaatct
ccctctggtggctacatcgtgtactgcacctgctctgtcatgattgaggagaatgagtgg
gtgatagactatgctctgaagaagaggaacgtaaaactggtgccgactggattagacttc
ggaaaggagggatttacaaagttccgtgagtttaggctgcaccagacgatgaagctgaca
cgaaggttctaccctcacactcacaacatggagggattctttgtcgccaagttgaagaaa
ttctctaacgccatccctgggcaagaaccacaggcaaaggaaggagaagaaaacactgag
gcgtctgaaacaccaactgagcaatctaccgaaactcctgcgtcatcatcttctcctcag
aagagtcccacacagccgacctccccgtctgccaaatccaagaagaaacgcctcttctgg
aagaacaagaagtctggaaagtctccaaaggccaagacgttcaaggggcagcagaaaacc
agcgcaggaaagagaagaaaaaacaaacagaacccaggaaacaagaagaaacagaagaag
gagtga
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