Branchiostoma floridae (Florida lancelet): 118430629
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Entry
118430629 CDS
T01074
Name
(RefSeq) rootletin-like
KO
K16469
rootletin
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
bfo03037
]
118430629
Cilium and associated proteins [BR:
bfo03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
118430629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
PUMA_CC
Crescentin
ERM_helical
Motif
Other DBs
NCBI-GeneID:
118430629
NCBI-ProteinID:
XP_035697504
UniProt:
A0A9J7NB46
LinkDB
All DBs
Position
14:16398113..16448123
Genome browser
AA seq
2363 aa
AA seq
DB search
MSEELSASGFVRKRVQRLERLFQVKGGAPLSNEELEQEGLETWENPWEKISTLEKALEFE
STYHKKARDRISALSEVLKEMEKESLDRTILDLRNQQLQEMLAELEKEYLLVCDDKSQEC
AALTEENTMLLEQLEKEHSDKKMFQQECKNLTTKAAQQQQQLEELKKKLEDLEDERQELE
TNKFQQGVLEERIRELEHDLESDRKEMDESTRLNKELQEKVEELEHDLRRKTQECCNMEL
VNSEIEEKLEQVQESFAVSKRQCQSLAAQKSQLQSVVEELEVKVEESPRQATQKMLEQYE
ELENRLQELEQLLKHETGERERETTESKSLASQNIELRRKLEDEHANYKRKLQAYQDGQQ
RQAQLVQKLQSKVLQYKKKVGELESSINEREKESEAAKLDLESTRDNLSRSLESSEARLR
ATEEEHSMDLENALIKLEEEQQRSASLAHVNAMLREQLDQATQANQQLTADIQRLTQDWT
RAREDLENKEAEWREEEASFNSYFSQEHGRLLGLWRTVMSLRRQFAEVKSATERDMSGIR
ADMTRSSRSLHSACLNLQANTRMADSTTSVQLDKERADRSEMENQLRDKVKEVITLQSRL
DTERSDLSGRINELSVQNERLKLQVKDLNKTIENLETSRAEATQELERSQAEALRDETEA
LHQALRDIANVVITDADGVGEKDDDTMADADLSLRSTSPSRLRSTSPSRLRSPSPSRRSP
SRGRSPARTFSPAFAESTLGAVQAALQKRQLQVQELRAKLNAQRDQGGSLKKQLDDADNE
RRRLENEVLSYKERLDAASRSKDDAVRDANRFKNALDLTGSEKSALESIRSSLNDEIEAL
NAENQKLQAANADLQHQRDSLEDEKDDVIKDKERGQKEIERCNRVQEQMEMKNSALREET
VTLKEALNRAILEKEVLDQEKAEIAESLSKVELQRAELELEISKLKTEEAGLRDSLLKMQ
ALNEGLGQDKIELNKMIMQLEAEKASLMGEKGELEQEKSSLKDELVKTEQEKMEVENMKS
GLDQSLVLTEQTREKLEEDLMSVQREKAEVSEQLSQTTRHKNALAEELLQSRREVERQSD
TVVRVAREKEELTKEKANLVVQLTAAERENRAQSEEIATLRADKESLETQLYDSQTLASE
LQTRKEQLEGENQTILLNKEALQVEIGRVRKEMEIEITKLERDKEALNQKLAQQERDSSL
ALKNAQQSHEEDVDRLMREKETQRLDLESEREEIIHKNTQEKDEMLARFDKEKEELNEEL
EALAQDKDESLLLAENDKQQALSLKEQEKQTVVEKLGSAQRDIANASMEMERMKRDAYSK
QEQDKTTINSLNQELKNFRAQFEEATNAHEREIKDLNGQIAEVRKQREAAHKEVAELKTQ
LKMVEETRDGVRRDLIEAHRRIREGDEDRELKRKEIIDLKRMNNDEIREKEAINKTNEEL
RQKVKKTEGEKSNLGRELGDARQRINVLSEKLDAGGKENSDLRNSLREVEKSRLEARREL
QELRRQVKMLDSESKKKSKEVEELQNRVSRDEEKEEEARRESYGLKQKVMETEASREAAQ
KEIAYLRRKLAELDDDSKLKEKDYLATIEEGRANERKMNDQMRNLEIALENTKADAADLS
LKLSAADGRVNGLEAELSRLEAQKRDTEYKLGSLHSALRRTLGISRMGRSPSPGLMRTRS
RSPSPTRRGRPTSPTKGFDSTFATTTDGMGEIIPDTGSPGALERSLSPARRSMTPTRLET
SAQDIDPEVVRGALRDFLQELKESQRDKEDAQINGKNLQRQLVEMQSQRDLYEQRLQQLQ
KTLGETEEGKRGSDGRLSAAQTALMLQEETIRRNDRERKGLVEKVSTLERGLQSAETEKR
QLEDKINKMKQKEGSLESDKKKLKENWDNAENRNTKSELSRRSLEGDLQRMQLAFNDKET
ENQVLQDRIDSLTKQIQDLEGKATSLQLTVDRLSMALAKTEEGESQLKDKVQNLSMTLSD
SNATSQTLQEKIQQVQKAVTNSEHDRRVLQERLDSTRQALSEAKKSNQSLAERVQLLQNE
NAEADVRRMELEGQVRQSQQMVREHKNSEDEALQRIQKVQEDKRVLQERITGLQRVIAQL
ETEKRETERSAVRLEKDKSALKKTLDKVEREKMKTEETTLQLDNERSTIERQMGQLESEN
VEMQRQIQALQATLAETEQQHAQRLIELTTRHRQETEMETERLRTAQLQAERTLEARERA
HRQKIKGLEEQIATLKDQLRQEMQKKQQLLTRSARALEESRDIHGVLGDSLRSVARDTSL
DPLLLEHETKKLDDSMDYATRIGATSPPTSLGRRNGGRSTSPSRIGRPSSTSTPAAAVRR
SPTASIARRSSPTPSSLRPSFRK
NT seq
7092 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggaactgtctgcatcagggtttgtgaggaagcgagtgcagcggcttgagaga
ttgtttcaagtgaaaggaggtgcaccactctcaaatgaggagttggaacaggaaggcttg
gagacatgggagaacccatgggagaaaatttccacgcttgaaaaagctttggagttcgaa
agtacctaccacaagaaggcacgagaccggatttcagcgttgagtgaagtattgaaggag
atggaaaaagagtcactagacagaactatcctggatctgaggaaccaacagttacaagag
atgctggctgagttggaaaaggaatacctgcttgtctgtgatgacaagagtcaggagtgt
gcagccctgacagaagagaacacaatgctactagaacagttagaaaaggaacacagtgat
aagaagatgttccaacaagagtgcaagaacctcaccactaaggctgcacaacagcagcag
caacttgaggagctgaaaaagaagttggaggacttggaagatgaaagacaggagttagaa
acaaataaattccagcaaggtgttctggaagaaagaatacgagagttggaacatgacttg
gagagtgacagaaaagagatggatgaatcaacaagactcaataaagagttacaggaaaaa
gttgaagagctggagcatgacctcaggcgcaagacacaggagtgctgcaacatggagtta
gtcaactctgagatagaggaaaaattggaacaggttcaggagagttttgcagtcagtaag
agacaatgccagtctttggcagcacagaaatcccagctacagagtgttgtagaagagcta
gaggtaaaagtggaggagtctccccgccaggccactcagaagatgctagaacagtatgag
gagctcgaaaataggttacaagagctggagcagcttctgaagcacgagaccggcgagcgc
gagcgcgagaccacggagagcaagagcctggcctcgcagaacatcgagctgcgccgcaag
ctggaggacgagcacgccaactacaagcggaagctgcaggcgtaccaggatgggcagcag
cgccaggcacagctcgtgcagaagctgcaaagcaaggtcctgcagtacaagaagaaggtt
ggtgaacttgagtcgtccatcaacgagcgcgagaaggagagcgaagctgccaagctcgac
ttggagtccacccgagacaacttgtctcgttccctggagtcgtcggaggcacgtctgcgt
gccactgaggaggaacacagcatggatctggagaatgccctgatcaagctggaggaggag
cagcagaggagtgctagcctggcccacgtgaacgccatgctgcgtgagcagctggaccag
gccacgcaggccaaccagcagctgaccgccgacatccagcgcctgacccaggactggaca
cgcgcccgcgaggacctggagaacaaggaggctgagtggagggaggaggaagcctccttc
aacagctacttcagtcaggagcatggtcgtctgctgggcctgtggcgtactgtcatgtcg
ctgcgccgccagttcgctgaggtcaagtctgcaaccgagagggacatgtctggcatccgt
gccgacatgacgcgttcctctcgctctctgcactctgcctgcctcaacctccaggccaac
acgcgcatggcggactccaccacgtccgtgcagctcgacaaggagcgcgccgaccgttcc
gagatggagaaccagctgcgcgacaaggtcaaggaggtcatcacgctccagtccaggctg
gacacggagcgctcggacctcagtggcaggatcaacgagctgtccgtgcagaacgagcgc
ctcaaactgcaggttaaggacctcaacaagaccatcgagaacctggagaccagccgtgcc
gaggccactcaggagctggagcgctcccaggccgaggccctgcgtgatgagaccgaggct
ctgcaccaggctttgcgcgacatcgctaacgttgtcatcaccgacgctgacggtgtcggg
gagaaggatgacgacaccatggctgatgctgacctgagcctgaggtcgacctctcccagc
cgtctgcgttcgacctctcccagccgcctgcgtagcccgtctccctctcgccgctcgccc
agccgcggccggtccccggcccgcaccttctctcccgcgtttgctgagtccaccctgggt
gccgtacaggctgcactgcagaaacgtcaactccaagtccaggagctcagggccaagctg
aacgcccagcgcgaccagggcggctcgctcaagaagcagctggatgatgcagacaacgag
aggcgtcgccttgagaacgaagtcctgtcttacaaggagaggctggatgcagcgagtcgc
tccaaggacgatgcagtccgtgatgccaacaggttcaagaatgctctcgacctgacggga
agcgagaagtctgcgctggagtccatccgttcatctctgaatgatgaaatcgaggccttg
aacgcggagaaccagaagctccaggctgccaacgctgaccttcagcaccagcgtgacagc
cttgaggacgagaaggatgatgtcatcaaggacaaggagcgtgggcagaaggagatcgaa
cgatgcaaccgtgtgcaggagcagatggagatgaagaactctgcgctgcgtgaggagact
gtgactctgaaggaggccctgaaccgggctatcctggagaaggaggtcctcgatcaggag
aaggcagagattgctgagtctctctccaaggtggagctgcaacgtgcagagcttgagctg
gagatcagcaaactgaagaccgaggaggccggcctcagggactcactgctcaagatgcag
gcacttaacgagggcctgggacaggacaagattgagctgaacaagatgatcatgcagctg
gaggctgagaaggcctccctgatgggtgagaagggagaactggagcaggagaagtccagt
ctcaaggacgagcttgtcaagactgaacaggagaagatggaggtggagaacatgaagagc
ggcctggaccagtccctggtgctgacagagcagaccagggagaagctggaagaggacctc
atgtctgtccagcgggagaaggctgaagtctccgaacagctgtctcagacgactcgccat
aagaacgcgctggcggaagagctgctgcagtctcggcgtgaggtggagcggcagagcgac
accgtggtccgtgtggccagggagaaggaagaactgaccaaggagaaggccaacctggtg
gtgcagctgaccgctgccgagagggagaacagggctcagtctgaggagattgccaccttg
cgtgcagacaaggagagcctggagacccagctgtatgactcccagactctggcctccgag
ctgcagacccgtaaggaacagctagagggcgagaaccagaccatcctgctcaacaaggag
gcactgcaggttgagattgggcgcgtgcgtaaggagatggaaattgagatcaccaagttg
gagcgcgacaaggaggccctgaaccagaagctggcgcagcaggagcgcgacagctcgctg
gcgctgaagaacgcccagcagtcgcacgaggaggacgtggacaggctgatgcgcgagaag
gagacccagcggctggacctggagtctgagcgcgaggagatcatccacaagaacactcag
gagaaggatgagatgctagccaggtttgacaaggagaaggaggaactcaacgaagagctg
gaggccctcgcacaggacaaggatgagagtctgctgctcgcagagaatgacaaacaacag
gccctttccctgaaggaacaggagaagcagactgtggtggagaagcttggctcggcccag
cgtgacatcgctaatgccagcatggagatggagcgtatgaagagagacgcctacagcaaa
caggagcaggacaaaaccaccatcaactccctcaaccaggaactcaagaacttcagggct
caattcgaggaggcaaccaatgcccatgagcgtgagattaaggacctgaacgggcagata
gccgaggtcaggaagcagcgggaggccgctcacaaggaggtggcagaactcaagacgcag
ctcaagatggtggaggagacacgcgacggtgtgcgtcgtgacctgattgaggcccaccgc
aggatacgtgaaggtgacgaggaccgtgaactgaagcgtaaggagatcatcgacctgaag
cgcatgaacaacgacgagatccgcgagaaggaggccatcaacaagaccaacgaggagctg
cggcagaaggtgaagaagactgagggagagaagagcaacctgggcagggagctgggagat
gccaggcagaggatcaatgtcctgagtgagaagttggatgctggtggcaaggagaactca
gacctgcgtaacagcctgcgcgaggtggagaagagccgcctggaggcccggcgtgaactg
caggagctgcgccgacaggtgaagatgctggacagcgagagcaagaagaagagcaaggag
gttgaggagctgcagaaccgcgtgtctcgtgacgaggagaaggaagaagaggcgcgccgt
gagtcgtacggcctgaagcagaaggtcatggagaccgaggccagccgcgaggcagcgcag
aaggagatcgcttacctccgcaggaaactggctgagctggacgatgatagcaagctcaag
gagaaggactatctggcaactatcgaggagggccgtgccaacgagaggaagatgaacgac
cagatgcgtaacctggagatcgcgctggagaacaccaaggctgacgccgccgacctcagc
ctcaaactgagcgctgctgacggcagggtcaacggcctggaggccgaactgtctcgtctg
gaggcccagaagcgtgacactgagtacaagctgggcagcctgcactctgccctgcgccgt
accctggggatcagccgcatgggtcgctcccccagccccggcttgatgaggacacgctcg
cgcagccccagcccgacccgtcgcggcagacctacctcccccaccaagggattcgacagc
accttcgccaccaccacggacggcatgggtgagatcatccccgacaccggctcccccggc
gcgctggagcgaagcctcagccccgcacgccgctccatgacccccacgcgactggagacc
tccgctcaggacattgaccccgaggtcgtcagaggtgctctcagggacttccttcaggaa
ctcaaggaatcacagcgcgacaaggaggatgcccagatcaatggaaagaacctccagcgc
cagcttgtggagatgcagagccagagggacctgtacgagcagcgtctgcagcagctccag
aaaactctgggagagacagaagagggtaagagaggttccgacggccgcctgagcgccgca
cagaccgccctgatgttgcaggaggaaaccatccgccgcaacgaccgcgaacggaagggt
ctggtggagaaggtgtccaccctggagcgcggcctgcaatctgctgagacagagaagagg
cagctggaagataagatcaacaagatgaaacagaaggagggcagcctggagtctgacaag
aagaagctgaaggagaactgggacaatgctgagaaccgcaacaccaagtctgaactgtca
cggcgctcgctggagggagacctgcaacgcatgcagctggcatttaatgacaaggagaca
gagaaccaggtgcttcaggaccgtattgacagcctgaccaagcagattcaggacctggag
ggtaaggccacctccctgcagctgactgtggacaggctgtccatggcactggccaagact
gaggagggagagagccagctcaaggataaggtgcagaacctgtccatgaccctgtcggac
agtaatgccacatcacagaccctacaggagaagatccaacaggtccagaaggctgtcacc
aacagcgagcatgaccgtcgcgtgcttcaggagcgtctcgactccaccaggcaagccttg
tcggaggctaagaagagtaaccagagcctggctgagcgtgtgcagctgctgcagaacgag
aacgccgaggcggacgtgcgccgtatggagctggagggacaagtccgccagtcgcaacag
atggtgcgtgaacacaagaactcggaggacgaggccctacagaggatccagaaggtgcag
gaagacaagcgagtcctgcaggagcgtatcaccgggctgcagcgcgtcatcgctcagctg
gagactgagaaacgcgagacggaacgttccgccgtccgtctggagaaggacaagtctgca
ctgaagaagactctcgacaaggttgagcgagagaagatgaagacggaggagaccaccctg
cagcttgataacgagcgctccaccattgagcgacagatgggccagctggagtcagagaac
gtggagatgcagcgccagatccaggcactgcaggctacactggctgagactgagcagcag
catgcacagaggttgattgagctgaccacccgacatcgccaggagacagagatggagact
gagcgcctcaggaccgcccagctgcaggccgagcgtacgctggaggcgcgggaacgcgct
catcgtcagaagatcaagggactagaggagcagattgccaccctgaaggaccagcttcgt
caggagatgcagaagaagcagcagctgctgacccgctctgctcgcgccctggaggagtct
cgggacatccacggcgtgctgggagactctcttcgctccgtcgcccgcgacacctctctc
gacccactgctcctggagcacgagaccaagaaactggacgactcaatggactacgcgacg
cgcataggagcgacctccccgcctacgagtctcgggcggcgcaacggcgggcgcagcacc
tccccctccaggattggccgcccctcctcaacatccacccctgctgcagcggtccgccgc
tcgccaacggccagcatcgctcgtcgttccagcccaacaccgagctcccttcgcccgtct
ttcaggaagtag
DBGET
integrated database retrieval system
