Branchiostoma floridae (Florida lancelet): 118430653
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Entry
118430653 CDS
T01074
Name
(RefSeq) echinoderm microtubule-associated protein-like 1 isoform X1
KO
K18595
echinoderm microtubule-associated protein-like 1/2
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bfo04812
]
118430653
Cytoskeleton proteins [BR:
bfo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
EMAP
118430653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WD40_Prp19
DCX
WD40_MABP1-WDR62_1st
WD40_WDHD1_1st
WDR55
HELP
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
KNTC1_N
WDR90_beta-prop_4th
Beta-prop_Vps41
eIF2A
DCX2_DCDC1
PQQ_2
RMC1_N
Motif
Other DBs
NCBI-GeneID:
118430653
NCBI-ProteinID:
XP_035697529
UniProt:
A0A9J7MCL2
LinkDB
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Position
14:complement(11031300..11051755)
Genome browser
AA seq
1349 aa
AA seq
DB search
MHRQDALRAFRRPSDSDDSGISEAKILVPPGRRHSATLVKDALQPEAAFQKLQVRRYSLE
ETDIKADSRRRHSSTNTKGTLISETPSDNIQVRRLSLGEGQRPEMYTIKDINITIGDEKF
KINTEDLTSTEQKDLEISTKMKMAKVDSSGVIQDSRVQSMRDSGIDIRAESEDSLPNSGD
DSKMEIEVGKIKHELVPITSPEEGHSGPQAPTHKDNITIPIEIRVPGGEGRQSKSAPPAR
DEPALPGGLSPRSRIPVPVQTADMSRENRADVLNRAERLLRAQESMDPTQNKQHASLPKA
PENNSLHIARVEHPPYIPPILPPSKPAYPESRQTVTTNNLNSESDFSDDDDDLTTARSVL
DSRQPLNQPRRARRVTFYRNGDPHWKGVNFAINNKRIRNMEALLILLSEKIPLPYGVRHV
YTLGGKRLTDLTELEHGKSYVCASGEMVKGVDYGRKTERYWHNRKPTAGKRRGENYLYKE
DPVDRLSIDSRQSMMSDQLSPRSKPRVITIISNTHRDSRGKILLNPRTSQNFEDILKDMT
GAIKMTNPPIEALYTFSTEQKVQGFGQLFREFRDCDIFIACGSESLKRGPPSSEGYKSDA
PAHAQYDHTQPIKQSTRKTQTPQKQQMSGSSSDSGEDSLTPPPPSQAYRSRRRSVQSNAT
QTDIEADPKPLDDFADNSIDTLAVQDSDDPYVTSPVASEDDVVRMAIHGRRQTFFRPTSY
DKTYVNPGSRPNKKLKLEWVYGYRGYDARDNLCVLPSGELMYFVATVVVMYNPRKETQRH
YIGHTEDIQCMSHHPSEQYVATGQMAGQLPDAHAHIRVWDHVTLNTLAVIGLETFQNGIC
CLGFSKQNHGNYLMAVDEGDNHVLSVWDWQADKIVAKTKTHPDTVVLGAFHPHEDSILIT
AGKQHMYFWKMVGGKILRDKKSGVFEGEKPKFITGMEFSATGDVITGDSSGNILVWSRDD
SNIFNLQHAIMRAHEKSVFTLRMLSDGTLLSGGGVDRKLVAWDSLRGYIPAKAERQLSEA
NGGIRTIVEQNAGQADGLLYLATSNNLIIQGSLQTKFTTVIQGHSEELWALAVHPHEHAF
LTAGYDNHVCLWSSATHKLLWRVSVEKPCLSATFSPNGALAVVGTTVGLFVALNAYDGSL
VASFQVGTEQLDAIRFSPDGSLLAMGSHDNTIYLFSVLDDGRTFRKAALLKGHKNFLTHI
DWSSDGRYLQSVDGDYELLFWKVDENRRENPAVTRDVTWHTQTCILGYNVLGIWPARENG
IDINTVSRSESGDLLAVGDSQGFLKLYRYPSTQKKAQSHQWKMCSSNVTNVKFLYDDGYL
LTTGGMDAALMQWAVQVTEGINRNRAKRY
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgcatcggcaggacgcgctccgcgcgtttcgtcggccgtctgactctgacgatagcggt
atctcagaagccaaaatactagttcccccaggccgtcgacactctgcgacgcttgtcaaa
gacgccctgcagcccgaagctgccttccagaaacttcaagtgcgaagatattcccttgaa
gaaaccgacataaaggcagattcgcgtcgtcgacactcttcgacgaatactaaaggcact
ctgatttctgagactccttccgacaatattcaagtgcgacgattgtctctcggagaagga
cagaggccggaaatgtacaccatcaaggatatcaacatcaccatcggcgatgagaagttc
aagatcaacacagaagatctgacttcgaccgagcagaaagatctcgagatctcgaccaag
atgaaaatggccaaggttgactcgagcggagttatccaggactcccgggtacagagtatg
agggactccgggatcgacatccgggcggagtcggaggacagtcttccgaacagcggagac
gacagtaagatggagatcgaagtgggcaaaatcaagcacgagctcgtgccgatcacatcg
ccggaagaaggacacagcggtccccaagcaccgacccacaaggataacatcaccatcccg
atcgagatacgggtgccagggggcgaagggcggcagagcaagtcggccccaccggctcgt
gacgagcccgcgctccctggcggcctctccccgaggagccggatccccgtcccggtgcag
acggcggacatgagccgggagaacagggcagacgtgctgaaccgggcagaaaggctgctg
agggctcaagagtccatggatcccacacagaacaaacaacacgcaagtttaccgaaggca
cctgagaacaacagtcttcacatcgcacgggtggaacatcctccatatatcccaccaatt
ctgccgccttcaaaacccgcctatccagaaagccgccaaaccgtcactaccaacaacctc
aactccgagagcgacttctcagacgatgacgacgatctcacgacggctcgaagcgtcttg
gacagtcgtcagcccctcaaccagccccgccgggcccggagggtgacgttctaccgcaac
ggcgacccacactggaagggcgtcaacttcgccatcaataacaaacggattcgcaacatg
gaagcgctgctgatcctcctgagcgagaagattcccctcccgtacggcgtgcgtcacgtg
tacaccctgggcggcaagcggctgacggacctgacggagctggagcacggcaagtcgtac
gtgtgcgcctccggggagatggtgaagggagtggactacggcaggaagaccgagcgctac
tggcacaacaggaaacccacggcgggaaaacgtcgaggagagaactacctctacaaggaa
gaccctgtggacaggctctccatagactccagacagagcatgatgagtgatcagctctct
ccgcggagcaagcccagagtcatcaccattatctccaacacgcacagggactcgcgcggg
aagatattactcaacccacgaacatcccagaactttgaggacatcctgaaggacatgacg
ggcgccatcaaaatgaccaaccctcccatcgaggcgctctacacattctcaacagaacaa
aaggttcaggggtttggccagttgttccgtgagttcagagattgtgacatcttcatagcc
tgcggctcggagtccctgaaaagaggcccgcccagcagcgaggggtacaagtctgacgcg
cctgcgcatgcacagtacgatcatacccagcccatcaaacagtccactaggaaaacacag
acacctcagaaacaacagatgagcggatcctccagcgacagtggagaagatagcctcacc
ccaccaccacccagccaggcctacagatcgcgcaggcgcagtgtgcagtccaacgccaca
cagacagacatcgaggccgatcccaaaccacttgacgacttcgcggacaactccatagac
acgttggcagtccaggacagtgatgacccctacgtgacgtcacctgtagcctcagaagac
gacgttgtgcgcatggccatccatggcagacggcagacgttcttccgaccaacgagctac
gacaagacatacgtgaatcccggcagcagacccaacaagaaactcaagctagaatgggtt
tacgggtaccgtgggtacgatgctcgggacaacctgtgtgttctgccgtccggagagctc
atgtacttcgtggctaccgtcgtcgtcatgtacaatccgcgcaaggaaacacaacgacac
tacatcggacacacagaagacatacaatgcatgtcccatcatcctagtgagcagtatgtt
gcaacgggacaaatggcggggcagttgccggatgcgcacgcacacatcagagtttgggat
cacgtgacactcaacaccttggccgttattggactggaaaccttccagaatggtatctgc
tgtctcggattctccaaacagaaccatggtaactacctgatggccgtggacgagggagac
aaccacgtgctcagcgtgtgggactggcaggcagacaagatcgtcgccaaaacaaagact
caccccgacacagtggtacttggagccttccacccgcacgaggacagcatcctcatcacg
gcagggaaacagcacatgtacttctggaagatggtcggtggcaagatcctcagggacaag
aagagcggagtgtttgagggcgagaagccgaagttcattaccggcatggagttttctgca
actggtgacgtcatcacgggagactctagcgggaacatcctggtgtggtcacgtgacgac
agcaatatcttcaatctccagcacgctatcatgcgcgcgcacgagaagagcgtgttcaca
ctgcgcatgctctcggacgggacccttctgtccggtggcggggtggaccggaagttggtg
gcgtgggactccctgagggggtacatcccggcaaaggcggagagacagctctccgaagcg
aatggcggtatccggaccattgttgagcagaacgcagggcaggcagacggtctgctgtac
ctggccacgtccaacaacctcatcatacaggggtccctacagaccaagttcaccactgtt
attcagggccacagtgaggagctgtgggctctggctgtccacccacacgagcacgctttc
ctgacggcgggttatgacaaccacgtctgtctgtggtcatcagccacacacaaactactg
tggagggtctctgtggagaaaccttgcctgtctgcgacgttctcccccaacggtgcttta
gcggttgtgggcacgaccgtcggcctgtttgtcgccctgaacgcgtatgacggctccctg
gtcgcctccttccaagtcggcacagaacagctggacgccatcaggttttcaccagacggc
agcctcctggccatgggttcccatgacaacaccatctacctcttctctgtgctagacgac
gggcggacattccgcaaggcggcgctgttgaagggacacaaaaacttcctgactcacatc
gactggtcgtcagacgggaggtacctacagagtgtggacggagactacgagctcctcttc
tggaaggtggatgaaaaccgccgtgagaatccagccgtgacgagagacgtgacatggcac
acacagacatgcatcctgggatacaacgtgctgggaatctggccagccagagaaaacgga
attgacatcaacacagtcagccgctcggagtcaggggatcttcttgctgtcggagatagt
caggggttcctgaaactctacagatatccctccacacagaaaaaggcacagagtcaccag
tggaagatgtgcagcagcaacgtcacgaatgtcaagttcctgtacgatgacggctacctg
ctgactacgggcggcatggacgctgcgctgatgcagtgggccgtgcaggtgacagaaggc
atcaacaggaacagggcaaagcgctactga
DBGET
integrated database retrieval system