Branchiostoma floridae (Florida lancelet): 118430668
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Entry
118430668 CDS
T01074
Name
(RefSeq) titin-like
KO
K18748
protein SSD1
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118430668
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
118430668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
Dis3l2_C_term
Rrp44_CSD1
Motif
Other DBs
NCBI-GeneID:
118430668
NCBI-ProteinID:
XP_035697547
UniProt:
A0A9J7N955
LinkDB
All DBs
Position
14:complement(13379052..13407188)
Genome browser
AA seq
2306 aa
AA seq
DB search
MAEEEGKGVEDVQKPMELEGIDFGQAHFQAGFGQPVDPDQVVPMMGDMPVPGEMNGGTAL
DFGQAPTVEPIDIPKRPEDLQFGDRDDEVPPSEPVTGTPVCLIPDCEECPLDMTPRPAGA
EGTPSPGGSDQPTGLDPNAKPFALLDPTAKPFDPVIKPTLDPNTPPFQPTAPIFNPDVPS
FDPTAKPFDPNVASFDPLIPFLDPNAPIFDPTAKPFDPNAKPFDPTAQPFVPEELVPELS
PEKQAPEEVAFGQLDSPGVIQEEKEKGEGKKKKKKRKKRKSEGDGGISSDSPSTPEHPKP
PLGAEEPVVPSDVAELEGAEAMKVNGDGVEKHEIEVTEKEDVNDVVKEILAQSKRQEEVA
ALMSQPKVEDVGPDDIEAEIVDTPPQEAEEGQQQGFLSEQATIEALLGARQEPEDLIEDV
SQEITGSEEVSTPGEADLEDSVQDAEITETSDFEFVPGDEMEEEEVPKSPRQEDGNAEAT
AVPEVQGQKEDLGDVAPSEEPMLIMGMEEEKESMEVTEAMPSGEQPVEEIGVAGEDQQMP
QAVYDPFNELAEQDPLIEEGLPPELTTGSEQDPLVETGPPPSGFQDADFFSDLAVKEPDA
EMPQEVPASQGDSSEVGPPPQEGPWGEPAAAAPTATDDIWGFDVQGGAVDDKVETESPQT
PEASTWDRDFQQHSMQSFAFSEQERQPQAWDAVFPSDDPPLEPSVAPHQAPILEEGADVS
DVAGEAQPFDAVFPPDEPAPVPMADIRVPTIPEESESTPEVTPTESEPSQPEQEADLEEE
VPAIAPDSPTSDIPAITVSEVPKVEPDDEFLVSVETASTGDIETVAMEAEVLEAAPNDIT
DEQIVAPPDVIADQVQVEEARQAEQVAQMAAIAAQQKWMEDVEQVVTETGKLEQEVEQIA
TDTAKAAEIVEEAMESVVDEGMRMEAAEVATEVLDRDEEKAVGVEGVPEVPPVVGAEERA
GGLEDAVVAPPVQVDVGAEEKVPEPEAMQVEAAVVAEPVDKEEVKEEAPKTEAVAEVKPP
EEAKAEEKVKKAKPAAAAAAKTKTADKAAPKTKPPGKTAAAKPAGKDITKRPTPPSSVSK
EAPPAKKKLGAVGATKTTKAAEPTKKPSSVSEPKTKKLTRPATAPSAKTTGTAATRAAKP
ASAPAKTTKAPPSGAVPKTKTDRKPGAARPKPLTKAAATGSSAEEQASVDSVEVAVDAAA
ALGDQVTPKPSAAAKKPAEKKAGIPTRTARPKPAGAAAPKAEPKTAAKKPAGTLGTRTAA
AKTGAAARPSSATAAKKEPTKKPDTATRLASAKTAAADKKPALGATRRPASATTSAAKKT
GATPATRVPAAKKADATGAAGKATPRAQSAAAAKSAAEKKTPATPARAKSAPVAGAAKAA
PKAGAKAPATPGLKARPKAPATPAAKDAVMKNKAKTPSGKGAPTPGRTPGRGMQPFEQYI
SREAVAEGLKKGDFIKGALRINARNFEDAYVPAPDGMSDLYIPGLHARNRALNGDIVVLK
VLPRSEWRVLQQEYELFKNLKTAATSDGTSPMTQLTEGMKQLALRTPEPAGAQAAVDTTA
GPQSPLTEGSGDAASSSGTAGSPKESDSSKSSEKEVGVKNDRKKKDPAGKGAKTPAKGAA
AKGAAARTPTRTPDKAGRLKPGEQTTPKGRQPPKAGSAKTPKAAEKPGIDPTTVPEQFLQ
KTAKVVYIYEKKHSRACTGHLKKLDDKDREKVLFSPIDHRLPRLKVPLEDCPAGFKERPE
DHAKFLFIARITDWKEDSGFAEARLAKSLGEAGQIEPETEGLLVENGVDFSEFSEVVLQC
LPQDLPWSIPAEEFENRRDLRLDCIFTIDPATARDLDDAVSCNKLDDGTYEVGVHIADVS
YFIQENTALDLTAACRATSVYLVQKVIPMLPRLLCEQLCSLNPAEERLAFSVIWKLTETG
DVLDEWFGRTIIRSCVKLSYDHAQSIIDNPDQLPTQEQLPTISDGHSIQDVAERVLNLYK
ISQNLRKKRFDGGALRLDQPKLAFSLDPESGLPNGCSVYQIRDSNRLIEEFMLLANMAVA
HKIHESFPERAVLRRHPPPQPKMVEDLVKTCGTMGINLDISSSGALHQSIARYIGDDVET
QATFYILTAMASKPMQLAKYFCSGCLPEEGMYHHYALNVPLYTHFTSPIRRYADVLVHRL
LGACLGCGPAVEKSAEELQGMTDHCNDRKDASKRVQEASADMFFASFVKECGPLEEDGMV
MGVLDQAVDVLVWRLGVVKRAYCNAIPLKSYDFEKVNGRPQLTLNWAEDPEHPEPATQVL
TYFSRVQVTLRANDQPLKYSALLKRP
NT seq
6921 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggaagaaggaaagggcgttgaagacgttcagaagcctatggaacttgaagga
atagactttggacaggcacatttccaggcaggatttgggcagcctgtagacccagaccaa
gtggtgcccatgatgggggatatgccagtgcctggggaaatgaacggtggaactgctctg
gatttcggacaggcaccaactgtggaaccgatagacatacccaaaagaccagaggaccta
cagtttggggacagagatgacgaggtcccaccctcggagcctgtgacaggaacacctgta
tgtttgatacctgactgcgaggagtgtcccctcgacatgacccctcgcccggccggagcc
gagggaacgccctctcctggaggctcagaccagccaacagggctggaccccaacgctaaa
cctttcgcacttctggacccaacagccaaaccgtttgatccagttattaaaccgacgctg
gacccaaacacgccaccgttccagccaacagcacccatctttaaccctgatgtgccatcc
tttgaccccactgcaaagccatttgaccccaatgtcgcatcctttgaccctttaataccc
tttctggaccccaatgctcccatctttgacccaactgcaaaaccttttgacccaaatgct
aaaccctttgacccaactgcccagccctttgtgcctgaagagcttgtgcctgaattaagt
ccagaaaaacaggcacctgaagaggttgcctttggtcaactagattcaccaggtgtcatt
caagaggagaaagaaaagggagaaggtaagaaaaagaagaaaaagagaaagaagaggaag
tcggaaggagatggaggaatatcttctgattcaccaagtaccccagagcatcccaaacca
ccactgggtgctgaagagccagtcgtgccttccgatgttgcagagcttgaaggggcagaa
gccatgaaagtaaatggagatggagtggagaaacatgaaatcgaagtgacagagaaggaa
gatgtaaatgatgtcgtgaaagaaatactagcacaatcaaaacggcaagaagaagttgct
gcgctcatgtctcagccaaaagttgaagatgttggtcctgacgacatagaggcagaaatt
gtagatacccctccacaagaggctgaggaggggcagcagcaaggtttcttatcagagcag
gctacaatagaggccctgctaggagctcggcaggagccagaggatttgatagaagatgtg
tcacaggagataacaggtagtgaagaggtgtccacacctggagaggcagacttggaggac
tctgtgcaagatgcagaaatcacagagacctcggattttgagtttgtaccaggtgatgag
atggaggaagaagaggtaccaaagagtccgaggcaagaggatggtaatgcggaagcaaca
gctgtcccagaagttcaaggacaaaaggaagacctcggtgatgtagccccaagtgaagag
ccaatgttaatcatgggaatggaagaagaaaaagaaagcatggaggtaactgaggcaatg
ccatctggtgaacagcctgttgaagagattggtgttgcaggagaagatcaacaaatgcca
caagctgtgtacgaccccttcaacgaattagcagagcaagaccctctgattgaggaaggg
ttacctccagaactgaccactggttctgaacaggatcctttggtagaaacaggtcctcct
ccttctggattccaagatgctgacttcttctcggatctggcagtgaaggagccagacgca
gagatgccacaggaggttcctgcgagccagggggattcctcagaggtaggcccccctccc
caggagggtccctggggagagccagcagcagcagcaccaacagctactgatgacatctgg
gggtttgatgttcagggtggtgctgtagatgacaaggtggagacggagtcgccccaaacg
cctgaggcgtcaacgtgggacagggacttccaacagcacagtatgcagagctttgctttc
tctgagcaggagagacaaccacaggcctgggatgcagttttccccagtgacgacccacca
ctggaaccatctgttgccccacaccaagctcccatcctggaggaaggtgctgatgtatcg
gatgtggcaggagaagcccagccatttgatgcggtgttccctccagacgagcctgctccc
gtccccatggcagacatcagagtgcctaccataccagaggagagtgagagcactcctgaa
gtaactcccacagaatctgaaccaagtcagccagaacaagaagcagatctagaggaggag
gtacctgccatagcacctgattcacctacatcagacatcccggcaatcacggtgtctgaa
gtacccaaggtggagccagatgatgagttcctagttagtgtggaaactgccagcacagga
gacatagagacagtcgcaatggaagctgaggtgctcgaggcggcacccaacgatatcact
gatgaacaaattgttgcaccccctgacgtcattgctgaccaggtccaggtagaagaggcg
aggcaggcggaacaggtggcccagatggcagccatagctgcgcagcagaagtggatggaa
gatgtggagcaggttgtcacggagacgggcaagttggaacaggaagtggagcagattgcc
acggatacggccaaagctgcagaaattgtggaagaggcgatggaaagcgttgtggatgaa
ggaatgagaatggaggcagccgaggtagcgacagaggtgttggatagggatgaagagaaa
gctgttggtgtggagggtgtgcccgaggttcctcctgttgtgggagctgaagagagagct
ggtggcttggaggatgcagttgtggctcctcctgtccaagttgatgtgggagctgaggag
aaagtgcctgagccagaagctatgcaagtggaagctgctgtggttgcagaacctgttgat
aaagaagaagtgaaagaggaagcaccaaagactgaagctgttgctgaagtaaagcctcca
gaggaagctaaggcagaagagaaggtgaagaaagccaagcctgcagctgcggcagctgcc
aaaaccaagaccgctgacaaggctgcgccgaagactaaacctccagggaaaactgctgct
gcaaagcctgctgggaaggatatcaccaagcgacccaccccgccatcgtctgtgtcaaaa
gaagctcctcctgctaagaagaagttaggtgctgttggggcgactaagactacaaaggct
gcagaaccaacgaaaaagccatcatctgtctcagaaccgaaaactaagaagctcaccagg
cctgcaacagcgccatctgccaagaccacaggtactgcagccaccagggcggcaaaacct
gccagtgctccggcaaagaccacaaaggcgccacctagcggggcagtacccaagacaaaa
acagaccgcaagccaggtgcagccagacccaaacctttgacaaaggctgcagcaacaggg
agcagtgctgaggaacaagcgtcggtggattcagttgaggtagctgtggacgctgctgct
gctcttggcgaccaggtaaccccaaaaccttctgctgctgcaaaaaagcctgcagagaag
aaggctggtatcccgacgaggacagctcgacccaaacctgcaggtgccgctgcaccgaag
gcagagccaaaaacagctgccaagaagccggctggcaccctgggaacaagaacagctgct
gccaaaactggggcagctgcaagaccttcatcagctactgcagcaaagaaggaaccaacg
aagaagccagacacagcaacaaggcttgcctctgccaaaacagctgctgccgataagaag
cctgccctgggagccacaaggaggcctgcctcagcaactacatctgctgcaaagaaaaca
ggtgcaacacctgccacaagagtacctgcagcaaagaaggctgatgccacaggtgccgca
gggaaggcaacacctagagcgcagtctgcagctgcagccaagtcagctgcagagaagaag
acaccagctacacctgcaagggcaaagtctgcccctgtagcaggtgctgctaaggctgcc
ccaaaggctggggccaaggcacctgccacacctggcctgaaggcaagaccaaaggcgccg
gcaacacctgcagccaaggacgcagtcatgaagaacaaggctaagactccaagtgggaag
ggagccccaacaccaggcaggactccaggcaggggcatgcagccttttgagcagtacatc
agtagagaagccgtggcagaggggttgaagaaaggagactttatcaagggtgccttgaga
atcaacgccaggaactttgaagatgcctatgttcctgctccggatggcatgtcagacctg
tacatcccggggctgcatgctcgtaacagagccctgaacggggacattgtggtgctgaag
gtactgcccaggtctgagtggagggtcttacaacaggaatatgaactttttaaaaatctt
aagacagctgcaacttccgatggtaccagtccaatgacacagctgacagaaggcatgaag
cagttagcactacgcacacctgaaccagcaggtgcccaggcagcagtagacaccactgct
ggaccgcagtctccacttacagaaggcagtggggatgctgcatcttccagtggaactgct
gggtcgcccaaggagagcgactcctcaaaatcatcggaaaaagaagtcggagtgaagaac
gatagaaaaaagaaagatcctgctggaaagggggcaaaaacaccagctaagggcgcggca
gcaaagggtgcagcagcgaggacacccaccagaaccccagataaggccgggagattgaag
cctggggaacaaacaacacctaaaggaagacaacctcctaaagcggggtctgctaagaca
ccaaaggcagctgagaaaccaggtatcgaccccaccactgttcctgaacaattcctgcag
aaaactgccaaggtagtttacatctatgagaagaaacattccagagcctgtacgggccac
ctcaagaagctggatgacaaggacagggagaaggttctgttttcccccatcgaccatcgc
ctgcccaggctaaaggtcccgctggaggactgtcccgcagggttcaaggaacgaccagaa
gatcacgccaaattcctcttcatcgccagaataacggactggaaggaggactctgggttt
gctgaagcgaggttagcaaagagcctgggagaggctggacagattgagcctgagacagaa
ggcttactggtggagaatggggtggacttttccgagttcagcgaagtggttctacagtgc
ctgccacaagatttaccatggtccattccagctgaggagtttgagaacaggagggacctc
agactggattgtatcttcaccattgacccagccacagcgagggacctggacgatgctgtg
tcctgtaacaaacttgatgacggtacctatgaggtgggtgttcacatagcagatgtgagt
tacttcatccaggagaacacagccctggacctgacagcagcctgtagagctacaagtgtc
tacctggtacagaaggtgattcccatgctgccccgcctactgtgtgaacaactatgcagc
ttgaaccctgctgaggagcgtttggccttctctgtgatctggaagctgacagagaccgga
gacgtgctggatgagtggtttggccgcaccatcatccgatcctgcgtgaagctgagctac
gaccacgcccagagcatcatcgataaccctgaccagctccccacccaggagcagctcccc
accatctctgatgggcactctatacaggatgtggcagagagggttctcaacttgtacaag
atctctcagaacttgagaaagaagagatttgacggaggagctctgaggttggaccagccc
aaattggcattctccctggaccctgagtcaggactgcccaacggctgctctgtgtaccag
atcagagacagcaacaggctgatagaagagttcatgctgctggccaacatggcggtggct
cacaagatccacgaatcattcccggagcgagctgtcctgcggcgccacccccctccccag
cccaagatggtggaggacctggtaaagacctgtggaacaatggggattaacctggacatc
agcagctctggggctctacatcaatccattgcccgttacattggggatgatgtggagaca
caggccactttctacatcctgactgccatggcatctaaacctatgcagcttgcaaagtac
ttctgcagcggctgcctaccagaagaagggatgtaccatcactacgccctgaacgtgcct
ctgtacacacacttcacctcacccatcaggagatacgctgatgtcctggtgcacaggctg
ctgggggcatgtctgggttgtggtcctgctgtggagaagtctgctgaggagctacagggt
atgacagaccactgtaatgacaggaaggacgcatccaagagggtgcaggaggccagtgcc
gacatgttctttgcctcttttgtcaaggagtgtggtcctctggaggaggacggcatggtg
atgggagtactggaccaggctgtggacgtactggtgtggagactgggggtcgtcaaaagg
gcatactgcaatgccatccccttgaagagctatgactttgagaaggtcaatggccgtccc
cagttgaccttgaactgggcagaagatccagaacaccctgagccggccacgcaggtcctg
acgtacttcagcagagtacaggtcacactccgggcaaacgaccaaccgctcaagtacagc
gctttgctcaagaggccttag
DBGET
integrated database retrieval system
