Branchiostoma floridae (Florida lancelet): 118430764
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Entry
118430764 CDS
T01074
Name
(RefSeq) general transcription factor 3C polypeptide 3-like
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfo03021
]
118430764
Transcription machinery [BR:
bfo03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
118430764
TFIIIC, fungi type
118430764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_8
TPR_14
TPR_1
TPR_16
TPR_11
TPR_CcmH_CycH
TPR_12
TPR_6
TPR_17
TPR_9
ANAPC3
HAT_PRP39_C
TPR_15
TPR_Slam
SHNi-TPR
HAT_PRP39_N
NatA_aux_su
Suf
ARM_TT21_C
FAT
TPR_4
ChAPs
Motif
Other DBs
NCBI-GeneID:
118430764
NCBI-ProteinID:
XP_035697677
UniProt:
A0A9J7MAJ5
LinkDB
All DBs
Position
14:18466134..18484573
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AA seq
948 aa
AA seq
DB search
MADSGMSSAEEVERRVAQYLRGEVSFQEFDAFRQERGIQSFVQMAPQPGTSTGGPTASGQ
TGRLVPPTGEGGGASENDDSDDYFDDDNFDTVKTRDDSDEDEEEMEGVEEEGDDSNTSPA
DTSLTAKYLEGKLSFSEFAELMEQEEDDGKETVKTAVEPSKKGVDISEAFSVELALEQEE
RKGRKRPKRRRVNEVPKPLRGLMGEANLRFARGKYDDAIKMCMEVIRQVPHCYEPFQTAA
MVYEEKGDMERSLQFALIAAHLNPQDPEEWVKLAEVSLEQNNISQAITCYKKALRYDPNN
IGILWEQANLLEQTQEPRKALEGYQQILKLLPEKEGNKYMDLMRDMSKTYHATGETEAAI
ETIQAAFTKHPTLVTFEDVNMLTELYVTMKQYRHVLEAMSNYCSVQLSWQGGVTDTMAAL
DRLGMPDTGKQETQVMQCTIPPETPIDLSIKLAVSLVHLRYLAAARPLVDMLLQESAEDM
GDLYLDIAEAYVDVGEYDSARPILAMLVNTERYNLAAVWLRYAECLNALGKTEHAVQSYA
KVVEMAPSHLGARLSLSALQQQLGRPEEALQALSEGAPAATPTAVETAAQVSSQPGPDVQ
LLHHKSTLLYSQGRMEDFVDSALLMLSKYFEEAYQQQNLQLVVTKITSRRRKYQLRAMVK
EQGGVGQGRSVVDLSGKLSSISKLEWWDLFCKASRSLTTLGRTEEVEHLTMAALASPQFE
RDLAKQKELKYMILSACCLNKNYRMAYVFVRPMIMENTGVNQLWNVFSQITTSSEDARHH
RFCLRLMIKNPHNIALSFLNGHNSLISGTYKHALGEYVRAYRLDPSNPMSLLLIGVTFFH
MASQKYTIKRHFVLVQGMSFLNEYLIHRGGTQEAYYNVGRALHQIGLEHLAIHYYQKALH
MAPPDVGDNKYSQLLDLRREVAYNLALIYSGSGSKNLAKMLLDKYCVV
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcggactcaggcatgtcgtcggcggaagaagttgagcgaagagttgcccaatatctc
cgcggagaggtgtccttccaggagttcgatgccttcagacaggagagggggatccaatcg
ttcgtacaaatggctccacagccgggtacgagtacaggggggccgacagcaagtgggcaa
actggtcggttggtaccgccgacgggggaggggggcggtgcctccgaaaacgacgactcg
gacgattacttcgatgacgacaactttgacaccgtaaaaacacgagacgacagtgacgaa
gacgaagaagaaatggaaggcgtggaagaagaaggggacgattccaacacgtctccggcg
gacacttcccttacggcaaagtacctcgaaggaaaactttctttctccgagtttgctgaa
ctcatggaacaagaggaagacgatggcaaggagacggtgaagacagctgtagagccgagt
aagaaaggcgtggacatttctgaagccttcagtgtggagcttgctctggagcaggaggag
agaaaggggaggaaacgacccaagagaaggagagtcaacgaggtccccaagcctctgcga
gggttgatgggagaggccaacctgaggtttgcccgggggaagtacgatgatgccatcaag
atgtgtatggaggtcatcaggcaggttccccactgctatgagccgttccagactgcagcc
atggtgtatgaggagaagggggatatggagcgctccctgcagtttgctctgatagctgca
caccttaaccctcaggatcccgaagagtgggtcaagttagcagaggtgtcactagaacag
aacaacatcagccaggccatcacctgttacaagaaagccctgagatatgaccccaacaac
atcggcatcctctgggaacaggctaacctactggaacagacacaggagcccaggaaggct
ctggaggggtatcagcagatactaaagcttctcccagagaaggaaggaaacaagtacatg
gatctcatgagggacatgtccaaaacctaccatgccacgggggagacagaggcggccata
gaaaccatacaggcagcttttaccaagcaccccaccttagtgacatttgaggatgtgaac
atgctgactgagctgtacgtcaccatgaagcagtatcgccatgtgttggaggccatgtcc
aactactgcagtgtgcagctctcttggcaagggggcgtcactgacaccatggctgcactg
gacagactgggcatgcctgacacagggaaacaggaaacccaggtgatgcagtgcaccatc
ccccctgagactcccatagacctgagcattaagctagcggtcagcctggtccacctgcgc
tacctggccgcagccagaccactggtggacatgttactgcaggagagtgctgaggacatg
ggggatctgtacctggacatagctgaggcttatgtcgacgtcggtgagtatgacagtgcg
cgccccatcctggctatgctggtgaacacagaaaggtacaacctggcagcagtctggctc
agatatgctgagtgcctcaatgcactgggaaagacggagcatgcagtgcagagctatgcc
aaggttgtggagatggctcccagtcacctgggtgcacggctgtccctgtcagcactacag
cagcagctgggcaggccagaggaggcactgcaggcactttcagaaggtgctccagctgcc
acccccacagctgtggagacagctgctcaggtgtcaagccagcctggtcctgacgtgcag
ctgctgcaccacaagagcacccttctgtactcacagggaagaatggaagactttgtggac
tctgccctgctcatgttgtccaagtattttgaggaggcgtatcaacagcagaacctacag
ctggtcgtgacgaagataacatcccgcagacggaagtaccagctgagagccatggtgaag
gaacaggggggagtcgggcaggggaggtcggttgtggacctgagtggcaagctgagttcc
atcagtaagctggaatggtgggacctgttctgtaaggccagccggagtctcactacctta
ggcaggacagaagaggtggaacatctcaccatggcagccctggcatcacctcagtttgag
agggatcttgctaaacagaaggagcttaagtacatgattctgagtgcgtgctgcctgaac
aagaactaccggatggcgtacgtgtttgtccgaccaatgattatggagaatacgggggtg
aaccagctgtggaatgtctttagtcagatcaccaccagcagtgaagatgcccgacatcac
cgcttctgtcttagacttatgataaagaatccacacaacatagctctgtccttcctgaac
ggccacaactcgttgatatcgggaacgtacaagcacgccctgggcgagtacgtgcgtgcg
taccgcctggaccccagcaatcccatgagtctcctgctgatcggggtgacgttcttccac
atggcctcgcagaagtacaccatcaagcgccacttcgtcctggtgcagggcatgtctttt
ctaaatgaatacctgatccaccgaggtggaacacaagaggcttactacaacgtgggaaga
gcactccaccagataggactagagcaccttgccatccactactaccagaaggccctacac
atggcccctcctgacgttggagacaacaagtattctcaactccttgacttgcggagagaa
gtggcctacaacctggctcttatctacagtggcagtggatccaagaacttggctaagatg
ctgttagataagtattgtgttgtgtag
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